Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm28724-201ENSMUST00000186149 625 ntBASIC-0.16□□□□□ -2.44
Scn4aQ9ER60 Gm23947-201ENSMUST00000093636 107 ntBASIC-0.16□□□□□ -2.44
Scn4aQ9ER60 Gm23337-201ENSMUST00000158959 118 ntBASIC-0.17□□□□□ -2.44
Scn4aQ9ER60 Gm23445-201ENSMUST00000082800 107 ntBASIC-0.17□□□□□ -2.44
Scn4aQ9ER60 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC-0.17□□□□□ -2.44
Scn4aQ9ER60 Gm22100-201ENSMUST00000157926 63 ntBASIC-0.17□□□□□ -2.44
Scn4aQ9ER60 Gm24718-201ENSMUST00000157521 136 ntBASIC-0.18□□□□□ -2.44
Scn4aQ9ER60 Gm24461-201ENSMUST00000082735 103 ntBASIC-0.18□□□□□ -2.44
Scn4aQ9ER60 Mir216b-201ENSMUST00000102363 86 ntBASIC-0.19□□□□□ -2.44
Scn4aQ9ER60 Gm22139-201ENSMUST00000158747 105 ntBASIC-0.2□□□□□ -2.44
Scn4aQ9ER60 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.2□□□□□ -2.44
Scn4aQ9ER60 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.2□□□□□ -2.44
Scn4aQ9ER60 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.2□□□□□ -2.44
Scn4aQ9ER60 Gm44327-201ENSMUST00000200068 117 ntBASIC-0.2□□□□□ -2.44
Scn4aQ9ER60 Gm23986-201ENSMUST00000157144 63 ntBASIC-0.2□□□□□ -2.44
Scn4aQ9ER60 AC161426.1-201ENSMUST00000214137 286 ntBASIC-0.2□□□□□ -2.44
Scn4aQ9ER60 Gm22234-201ENSMUST00000174906 65 ntBASIC-0.21□□□□□ -2.44
Scn4aQ9ER60 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.21□□□□□ -2.44
Scn4aQ9ER60 Gm27792-201ENSMUST00000184031 115 ntBASIC-0.21□□□□□ -2.44
Scn4aQ9ER60 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.21□□□□□ -2.44
Scn4aQ9ER60 n-R5s12-201ENSMUST00000083785 119 ntBASIC-0.21□□□□□ -2.44
Scn4aQ9ER60 Gm37746-201ENSMUST00000193249 198 ntBASIC-0.22□□□□□ -2.44
Scn4aQ9ER60 Gm43927-201ENSMUST00000204599 117 ntBASIC-0.22□□□□□ -2.44
Scn4aQ9ER60 mt-Tc-201ENSMUST00000082400 66 ntBASIC-0.22□□□□□ -2.44
Scn4aQ9ER60 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.22□□□□□ -2.44
Scn4aQ9ER60 Gm23461-201ENSMUST00000083265 107 ntBASIC-0.22□□□□□ -2.44
Scn4aQ9ER60 Gm25791-201ENSMUST00000083292 137 ntBASIC-0.22□□□□□ -2.44
Scn4aQ9ER60 Gm25599-201ENSMUST00000157816 103 ntBASIC-0.22□□□□□ -2.45
Scn4aQ9ER60 Gm26092-201ENSMUST00000179798 97 ntBASIC-0.22□□□□□ -2.45
Scn4aQ9ER60 Mir669a-1-201ENSMUST00000180238 97 ntBASIC-0.22□□□□□ -2.45
Scn4aQ9ER60 Gm26062-201ENSMUST00000083379 107 ntBASIC-0.23□□□□□ -2.45
Scn4aQ9ER60 Gm24835-201ENSMUST00000116777 111 ntBASIC-0.24□□□□□ -2.45
Scn4aQ9ER60 Mir466b-1-201ENSMUST00000177988 82 ntBASIC-0.24□□□□□ -2.45
Scn4aQ9ER60 Gm23601-201ENSMUST00000157259 131 ntBASIC-0.24□□□□□ -2.45
Scn4aQ9ER60 Gm22838-201ENSMUST00000158437 99 ntBASIC-0.24□□□□□ -2.45
Scn4aQ9ER60 Gm24884-201ENSMUST00000158784 119 ntBASIC-0.24□□□□□ -2.45
Scn4aQ9ER60 Gm23504-201ENSMUST00000158988 95 ntBASIC-0.24□□□□□ -2.45
Scn4aQ9ER60 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.24□□□□□ -2.45
Scn4aQ9ER60 Mir466h-201ENSMUST00000104748 81 ntBASIC-0.25□□□□□ -2.45
Scn4aQ9ER60 n-R5s39-201ENSMUST00000122613 108 ntBASIC-0.25□□□□□ -2.45
Scn4aQ9ER60 Gm23260-201ENSMUST00000158317 172 ntBASIC-0.25□□□□□ -2.45
Scn4aQ9ER60 Gm25014-201ENSMUST00000158401 103 ntBASIC-0.25□□□□□ -2.45
Scn4aQ9ER60 Gm26712-201ENSMUST00000180813 217 ntBASIC-0.25□□□□□ -2.45
Scn4aQ9ER60 Mir3967-201ENSMUST00000198710 68 ntBASIC-0.25□□□□□ -2.45
Scn4aQ9ER60 Gm44853-201ENSMUST00000209070 250 ntBASIC-0.25□□□□□ -2.45
Scn4aQ9ER60 AC125190.3-201ENSMUST00000223224 121 ntBASIC-0.25□□□□□ -2.45
Scn4aQ9ER60 Gm22169-201ENSMUST00000083229 107 ntBASIC-0.25□□□□□ -2.45
Scn4aQ9ER60 Gm22606-201ENSMUST00000158290 103 ntBASIC-0.26□□□□□ -2.45
Scn4aQ9ER60 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.27□□□□□ -2.45
Scn4aQ9ER60 Gm23661-201ENSMUST00000122630 87 ntBASIC-0.27□□□□□ -2.45
Scn4aQ9ER60 Gm24073-201ENSMUST00000158177 106 ntBASIC-0.27□□□□□ -2.45
Scn4aQ9ER60 Gm24223-201ENSMUST00000158827 90 ntBASIC-0.27□□□□□ -2.45
Scn4aQ9ER60 Traj61-201ENSMUST00000165025 72 ntBASIC-0.27□□□□□ -2.45
Scn4aQ9ER60 Gm23654-201ENSMUST00000116758 126 ntBASIC-0.27□□□□□ -2.45
Scn4aQ9ER60 Snord2-201ENSMUST00000157899 69 ntBASIC-0.27□□□□□ -2.45
Scn4aQ9ER60 Snord47-201ENSMUST00000083034 77 ntBASIC-0.27□□□□□ -2.45
Scn4aQ9ER60 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.27□□□□□ -2.45
Scn4aQ9ER60 Gm24131-201ENSMUST00000158539 107 ntBASIC-0.28□□□□□ -2.45
Scn4aQ9ER60 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.28□□□□□ -2.45
Scn4aQ9ER60 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.29□□□□□ -2.46
Scn4aQ9ER60 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.29□□□□□ -2.46
Scn4aQ9ER60 Gm22451-201ENSMUST00000122803 151 ntBASIC-0.29□□□□□ -2.46
Scn4aQ9ER60 Mir3094-201ENSMUST00000175121 64 ntBASIC-0.29□□□□□ -2.46
Scn4aQ9ER60 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC-0.29□□□□□ -2.46
Scn4aQ9ER60 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC-0.3□□□□□ -2.46
Scn4aQ9ER60 Gm11644-201ENSMUST00000119735 150 ntBASIC-0.3□□□□□ -2.46
Scn4aQ9ER60 Gm26133-201ENSMUST00000157363 100 ntBASIC-0.3□□□□□ -2.46
Scn4aQ9ER60 Gm23900-201ENSMUST00000157569 108 ntBASIC-0.3□□□□□ -2.46
Scn4aQ9ER60 Gm22258-201ENSMUST00000177645 94 ntBASIC-0.3□□□□□ -2.46
Scn4aQ9ER60 Gm26032-201ENSMUST00000178535 94 ntBASIC-0.3□□□□□ -2.46
Scn4aQ9ER60 Gm25210-201ENSMUST00000178813 94 ntBASIC-0.3□□□□□ -2.46
Scn4aQ9ER60 Gm25157-201ENSMUST00000178914 94 ntBASIC-0.3□□□□□ -2.46
Scn4aQ9ER60 Gm22046-201ENSMUST00000179027 94 ntBASIC-0.3□□□□□ -2.46
Scn4aQ9ER60 Gm25618-201ENSMUST00000179484 107 ntBASIC-0.3□□□□□ -2.46
Scn4aQ9ER60 Gm22941-201ENSMUST00000179630 94 ntBASIC-0.3□□□□□ -2.46
Scn4aQ9ER60 Gm25471-201ENSMUST00000180126 94 ntBASIC-0.3□□□□□ -2.46
Scn4aQ9ER60 Mir7651-201ENSMUST00000184154 64 ntBASIC-0.3□□□□□ -2.46
Scn4aQ9ER60 Gm43907-201ENSMUST00000203128 117 ntBASIC-0.3□□□□□ -2.46
Scn4aQ9ER60 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.31□□□□□ -2.46
Scn4aQ9ER60 Mir1898-201ENSMUST00000122643 83 ntBASIC-0.31□□□□□ -2.46
Scn4aQ9ER60 Gm26468-201ENSMUST00000158644 106 ntBASIC-0.31□□□□□ -2.46
Scn4aQ9ER60 Gm26097-201ENSMUST00000179642 93 ntBASIC-0.31□□□□□ -2.46
Scn4aQ9ER60 Gm27928-201ENSMUST00000183747 256 ntBASIC-0.31□□□□□ -2.46
Scn4aQ9ER60 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC-0.31□□□□□ -2.46
Scn4aQ9ER60 Gm23012-201ENSMUST00000104149 83 ntBASIC-0.31□□□□□ -2.46
Scn4aQ9ER60 Gm24913-201ENSMUST00000157286 107 ntBASIC-0.31□□□□□ -2.46
Scn4aQ9ER60 Gm24750-201ENSMUST00000157843 104 ntBASIC-0.31□□□□□ -2.46
Scn4aQ9ER60 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.31□□□□□ -2.46
Scn4aQ9ER60 AC158982.2-201ENSMUST00000226283 184 ntBASIC-0.31□□□□□ -2.46
Scn4aQ9ER60 Gm22699-201ENSMUST00000175376 105 ntBASIC-0.32□□□□□ -2.46
Scn4aQ9ER60 Gm23442-201ENSMUST00000082919 134 ntBASIC-0.32□□□□□ -2.46
Scn4aQ9ER60 Gm24649-201ENSMUST00000157106 134 ntBASIC-0.33□□□□□ -2.46
Scn4aQ9ER60 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.33□□□□□ -2.46
Scn4aQ9ER60 AC168880.2-201ENSMUST00000224488 201 ntBASIC-0.33□□□□□ -2.46
Scn4aQ9ER60 Gm24524-201ENSMUST00000082925 170 ntBASIC-0.33□□□□□ -2.46
Scn4aQ9ER60 Gm24246-201ENSMUST00000157315 132 ntBASIC-0.34□□□□□ -2.46
Scn4aQ9ER60 Gm25797-201ENSMUST00000082640 107 ntBASIC-0.34□□□□□ -2.46
Scn4aQ9ER60 Gm25565-201ENSMUST00000104605 105 ntBASIC-0.34□□□□□ -2.46
Scn4aQ9ER60 Gm11694-201ENSMUST00000118637 159 ntBASIC-0.34□□□□□ -2.46
Scn4aQ9ER60 Gm12013-201ENSMUST00000121971 155 ntBASIC-0.34□□□□□ -2.46
Retrieved 100 of 76,532 protein–RNA pairs in 1316.6 ms