Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Gm23017-201ENSMUST00000177583 72 ntBASIC-2.95□□□□□ -2.88
Cpsf1Q9EPU4 AC122210.2-201ENSMUST00000220216 115 ntBASIC-2.95□□□□□ -2.88
Cpsf1Q9EPU4 Gm6897-201ENSMUST00000117714 138 ntBASIC-2.96□□□□□ -2.88
Cpsf1Q9EPU4 Gm14758-201ENSMUST00000119104 138 ntBASIC-2.96□□□□□ -2.88
Cpsf1Q9EPU4 Gm12924-201ENSMUST00000121747 318 ntBASIC-2.96□□□□□ -2.88
Cpsf1Q9EPU4 Gm27798-201ENSMUST00000184989 71 ntBASIC-2.96□□□□□ -2.88
Cpsf1Q9EPU4 Mir509-201ENSMUST00000196089 75 ntBASIC-2.96□□□□□ -2.88
Cpsf1Q9EPU4 AC159896.1-201ENSMUST00000215264 215 ntBASIC-2.96□□□□□ -2.88
Cpsf1Q9EPU4 Mir489-201ENSMUST00000093599 107 ntBASIC-2.96□□□□□ -2.88
Cpsf1Q9EPU4 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC-2.97□□□□□ -2.88
Cpsf1Q9EPU4 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC-2.97□□□□□ -2.88
Cpsf1Q9EPU4 Gm23987-201ENSMUST00000117039 129 ntBASIC-2.97□□□□□ -2.88
Cpsf1Q9EPU4 Gm27410-201ENSMUST00000183851 115 ntBASIC-2.97□□□□□ -2.88
Cpsf1Q9EPU4 Gm23955-201ENSMUST00000157214 100 ntBASIC-2.98□□□□□ -2.89
Cpsf1Q9EPU4 Gm22165-201ENSMUST00000158414 103 ntBASIC-2.98□□□□□ -2.89
Cpsf1Q9EPU4 Gm27366-201ENSMUST00000184967 108 ntBASIC-2.98□□□□□ -2.89
Cpsf1Q9EPU4 Gm43749-201ENSMUST00000199345 352 ntBASIC-2.98□□□□□ -2.89
Cpsf1Q9EPU4 Gm24204-201ENSMUST00000082950 107 ntBASIC-2.98□□□□□ -2.89
Cpsf1Q9EPU4 Mir29a-201ENSMUST00000083676 88 ntBASIC-2.98□□□□□ -2.89
Cpsf1Q9EPU4 Gm22434-201ENSMUST00000158549 122 ntBASIC-2.99□□□□□ -2.89
Cpsf1Q9EPU4 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC-2.99□□□□□ -2.89
Cpsf1Q9EPU4 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC-3□□□□□ -2.89
Cpsf1Q9EPU4 AC166358.7-201ENSMUST00000221132 108 ntBASIC-3□□□□□ -2.89
Cpsf1Q9EPU4 AC125543.5-201ENSMUST00000222799 108 ntBASIC-3□□□□□ -2.89
Cpsf1Q9EPU4 AC154213.2-201ENSMUST00000227138 187 ntBASIC-3□□□□□ -2.89
Cpsf1Q9EPU4 Gm23570-201ENSMUST00000083029 104 ntBASIC-3□□□□□ -2.89
Cpsf1Q9EPU4 Gm22828-201ENSMUST00000083768 107 ntBASIC-3□□□□□ -2.89
Cpsf1Q9EPU4 Mir465c-2-201ENSMUST00000104757 81 ntBASIC-3.01□□□□□ -2.89
Cpsf1Q9EPU4 Mir465c-1-201ENSMUST00000093560 81 ntBASIC-3.01□□□□□ -2.89
Cpsf1Q9EPU4 Mir485-201ENSMUST00000093620 73 ntBASIC-3.01□□□□□ -2.89
Cpsf1Q9EPU4 Gm23982-201ENSMUST00000157141 106 ntBASIC-3.02□□□□□ -2.89
Cpsf1Q9EPU4 Gm22336-201ENSMUST00000157719 107 ntBASIC-3.02□□□□□ -2.89
Cpsf1Q9EPU4 Gm22089-201ENSMUST00000158336 102 ntBASIC-3.02□□□□□ -2.89
Cpsf1Q9EPU4 Mir16-2-201ENSMUST00000083672 95 ntBASIC-3.02□□□□□ -2.89
Cpsf1Q9EPU4 Gm25512-201ENSMUST00000083863 107 ntBASIC-3.02□□□□□ -2.89
Cpsf1Q9EPU4 Gm22591-201ENSMUST00000104243 106 ntBASIC-3.02□□□□□ -2.89
Cpsf1Q9EPU4 Gm22197-201ENSMUST00000116866 58 ntBASIC-3.02□□□□□ -2.89
Cpsf1Q9EPU4 Gm37763-201ENSMUST00000193445 120 ntBASIC-3.02□□□□□ -2.89
Cpsf1Q9EPU4 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC-3.02□□□□□ -2.89
Cpsf1Q9EPU4 Gm25943-201ENSMUST00000103791 90 ntBASIC-3.03□□□□□ -2.89
Cpsf1Q9EPU4 Mir466o-201ENSMUST00000104832 84 ntBASIC-3.03□□□□□ -2.89
Cpsf1Q9EPU4 Mir466b-4-201ENSMUST00000178801 90 ntBASIC-3.03□□□□□ -2.89
Cpsf1Q9EPU4 Gm25285-201ENSMUST00000178951 90 ntBASIC-3.03□□□□□ -2.89
Cpsf1Q9EPU4 Mir466b-6-201ENSMUST00000180061 90 ntBASIC-3.03□□□□□ -2.89
Cpsf1Q9EPU4 Mir466c-2-201ENSMUST00000180211 90 ntBASIC-3.03□□□□□ -2.89
Cpsf1Q9EPU4 Mir7673-201ENSMUST00000184567 64 ntBASIC-3.03□□□□□ -2.89
Cpsf1Q9EPU4 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-3.03□□□□□ -2.89
Cpsf1Q9EPU4 Gm29818-201ENSMUST00000218070 165 ntBASIC-3.03□□□□□ -2.89
Cpsf1Q9EPU4 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC-3.04□□□□□ -2.9
Cpsf1Q9EPU4 Gm24517-201ENSMUST00000122560 107 ntBASIC-3.04□□□□□ -2.9
Cpsf1Q9EPU4 Gm23352-201ENSMUST00000158428 64 ntBASIC-3.04□□□□□ -2.9
Cpsf1Q9EPU4 Gm22402-201ENSMUST00000174920 110 ntBASIC-3.04□□□□□ -2.9
Cpsf1Q9EPU4 Gm25449-201ENSMUST00000179389 79 ntBASIC-3.04□□□□□ -2.9
Cpsf1Q9EPU4 Gm27285-201ENSMUST00000183875 127 ntBASIC-3.04□□□□□ -2.9
Cpsf1Q9EPU4 Mir21c-201ENSMUST00000184910 78 ntBASIC-3.04□□□□□ -2.9
Cpsf1Q9EPU4 Mir470-201ENSMUST00000093565 75 ntBASIC-3.04□□□□□ -2.9
Cpsf1Q9EPU4 Mir190b-201ENSMUST00000104803 80 ntBASIC-3.05□□□□□ -2.9
Cpsf1Q9EPU4 Gm22401-201ENSMUST00000174927 117 ntBASIC-3.05□□□□□ -2.9
Cpsf1Q9EPU4 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC-3.05□□□□□ -2.9
Cpsf1Q9EPU4 Gm22055-201ENSMUST00000083388 107 ntBASIC-3.05□□□□□ -2.9
Cpsf1Q9EPU4 Gm25615-201ENSMUST00000177836 94 ntBASIC-3.06□□□□□ -2.9
Cpsf1Q9EPU4 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC-3.06□□□□□ -2.9
Cpsf1Q9EPU4 Gm25859-201ENSMUST00000083710 91 ntBASIC-3.06□□□□□ -2.9
Cpsf1Q9EPU4 Mir3094-201ENSMUST00000175121 64 ntBASIC-3.07□□□□□ -2.9
Cpsf1Q9EPU4 Gm29817-201ENSMUST00000210098 172 ntBASIC-3.07□□□□□ -2.9
Cpsf1Q9EPU4 AC145736.2-201ENSMUST00000216305 365 ntBASIC-3.07□□□□□ -2.9
Cpsf1Q9EPU4 AC102369.1-201ENSMUST00000218415 373 ntBASIC-3.07□□□□□ -2.9
Cpsf1Q9EPU4 Gm23240-201ENSMUST00000083009 121 ntBASIC-3.07□□□□□ -2.9
Cpsf1Q9EPU4 Mir706-201ENSMUST00000102262 84 ntBASIC-3.09□□□□□ -2.9
Cpsf1Q9EPU4 Gm23173-201ENSMUST00000157161 160 ntBASIC-3.09□□□□□ -2.9
Cpsf1Q9EPU4 Gm23016-201ENSMUST00000158431 62 ntBASIC-3.09□□□□□ -2.9
Cpsf1Q9EPU4 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC-3.09□□□□□ -2.9
Cpsf1Q9EPU4 Mir297a-3-201ENSMUST00000103768 102 ntBASIC-3.1□□□□□ -2.91
Cpsf1Q9EPU4 Mir669g-201ENSMUST00000116809 123 ntBASIC-3.1□□□□□ -2.91
Cpsf1Q9EPU4 Gm24673-201ENSMUST00000116948 124 ntBASIC-3.1□□□□□ -2.91
Cpsf1Q9EPU4 Gm26426-201ENSMUST00000177866 123 ntBASIC-3.1□□□□□ -2.91
Cpsf1Q9EPU4 Gm23108-201ENSMUST00000178295 124 ntBASIC-3.1□□□□□ -2.91
Cpsf1Q9EPU4 Gm26060-201ENSMUST00000180094 123 ntBASIC-3.1□□□□□ -2.91
Cpsf1Q9EPU4 Mir3535-201ENSMUST00000197651 147 ntBASIC-3.1□□□□□ -2.91
Cpsf1Q9EPU4 Gm9973-202ENSMUST00000220926 166 ntBASIC-3.1□□□□□ -2.91
Cpsf1Q9EPU4 Gm25854-201ENSMUST00000082792 72 ntBASIC-3.1□□□□□ -2.91
Cpsf1Q9EPU4 Gm24707-201ENSMUST00000082812 107 ntBASIC-3.1□□□□□ -2.91
Cpsf1Q9EPU4 Rny3-201ENSMUST00000083011 102 ntBASIC-3.1□□□□□ -2.91
Cpsf1Q9EPU4 Gm12584-201ENSMUST00000117109 1105 ntBASIC-3.1□□□□□ -2.91
Cpsf1Q9EPU4 Gm22598-201ENSMUST00000157600 127 ntBASIC-3.1□□□□□ -2.91
Cpsf1Q9EPU4 Gm28849-201ENSMUST00000188127 174 ntBASIC-3.1□□□□□ -2.91
Cpsf1Q9EPU4 Gm25089-201ENSMUST00000102015 79 ntBASIC-3.11□□□□□ -2.91
Cpsf1Q9EPU4 Gm24988-201ENSMUST00000104460 121 ntBASIC-3.11□□□□□ -2.91
Cpsf1Q9EPU4 Gm25424-201ENSMUST00000157612 58 ntBASIC-3.11□□□□□ -2.91
Cpsf1Q9EPU4 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC-3.11□□□□□ -2.91
Cpsf1Q9EPU4 Gm25840-201ENSMUST00000177821 79 ntBASIC-3.11□□□□□ -2.91
Cpsf1Q9EPU4 Gm24952-201ENSMUST00000177909 79 ntBASIC-3.11□□□□□ -2.91
Cpsf1Q9EPU4 Gm23682-201ENSMUST00000178146 79 ntBASIC-3.11□□□□□ -2.91
Cpsf1Q9EPU4 Gm24652-201ENSMUST00000178223 79 ntBASIC-3.11□□□□□ -2.91
Cpsf1Q9EPU4 Gm22629-201ENSMUST00000178272 79 ntBASIC-3.11□□□□□ -2.91
Cpsf1Q9EPU4 Gm24021-201ENSMUST00000178435 79 ntBASIC-3.11□□□□□ -2.91
Cpsf1Q9EPU4 Gm22274-201ENSMUST00000178441 79 ntBASIC-3.11□□□□□ -2.91
Cpsf1Q9EPU4 Gm22050-201ENSMUST00000178442 79 ntBASIC-3.11□□□□□ -2.91
Cpsf1Q9EPU4 Gm23688-201ENSMUST00000178502 79 ntBASIC-3.11□□□□□ -2.91
Cpsf1Q9EPU4 Gm23944-201ENSMUST00000178607 79 ntBASIC-3.11□□□□□ -2.91
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms