Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
Ssu72Q9CY97 Gm24895-201ENSMUST00000122742 74 ntBASIC1.48□□□□□ -2.17
Ssu72Q9CY97 Gm24648-201ENSMUST00000157111 132 ntBASIC1.48□□□□□ -2.17
Ssu72Q9CY97 Mir5117-201ENSMUST00000083226 84 ntBASIC1.48□□□□□ -2.17
Ssu72Q9CY97 Mir216b-201ENSMUST00000102363 86 ntBASIC1.47□□□□□ -2.17
Ssu72Q9CY97 Gm26478-201ENSMUST00000122611 133 ntBASIC1.47□□□□□ -2.17
Ssu72Q9CY97 Gm24222-201ENSMUST00000158834 93 ntBASIC1.47□□□□□ -2.17
Ssu72Q9CY97 Mir1933-201ENSMUST00000158930 88 ntBASIC1.47□□□□□ -2.17
Ssu72Q9CY97 Gm27297-201ENSMUST00000183395 105 ntBASIC1.47□□□□□ -2.17
Ssu72Q9CY97 Gm25644-201ENSMUST00000083209 107 ntBASIC1.47□□□□□ -2.17
Ssu72Q9CY97 Gm23951-201ENSMUST00000104029 132 ntBASIC1.46□□□□□ -2.18
Ssu72Q9CY97 Gm25542-201ENSMUST00000116889 94 ntBASIC1.46□□□□□ -2.18
Ssu72Q9CY97 Gm24946-201ENSMUST00000158332 106 ntBASIC1.46□□□□□ -2.18
Ssu72Q9CY97 Mir6997-201ENSMUST00000184313 71 ntBASIC1.46□□□□□ -2.18
Ssu72Q9CY97 Gm26224-201ENSMUST00000082506 80 ntBASIC1.46□□□□□ -2.18
Ssu72Q9CY97 Gm22030-201ENSMUST00000116942 63 ntBASIC1.45□□□□□ -2.18
Ssu72Q9CY97 Gm25968-201ENSMUST00000157167 100 ntBASIC1.45□□□□□ -2.18
Ssu72Q9CY97 Snora26-201ENSMUST00000175614 121 ntBASIC1.45□□□□□ -2.18
Ssu72Q9CY97 Mir6406-201ENSMUST00000183592 120 ntBASIC1.45□□□□□ -2.18
Ssu72Q9CY97 Mir653-201ENSMUST00000102402 85 ntBASIC1.44□□□□□ -2.18
Ssu72Q9CY97 Gm23109-201ENSMUST00000116867 126 ntBASIC1.44□□□□□ -2.18
Ssu72Q9CY97 Gm25056-201ENSMUST00000157372 62 ntBASIC1.44□□□□□ -2.18
Ssu72Q9CY97 Gm24290-201ENSMUST00000157634 96 ntBASIC1.44□□□□□ -2.18
Ssu72Q9CY97 Gm26089-201ENSMUST00000157898 107 ntBASIC1.44□□□□□ -2.18
Ssu72Q9CY97 Gm25693-201ENSMUST00000175443 85 ntBASIC1.44□□□□□ -2.18
Ssu72Q9CY97 Gm27993-201ENSMUST00000184362 85 ntBASIC1.44□□□□□ -2.18
Ssu72Q9CY97 Gm18433-201ENSMUST00000192747 197 ntBASIC1.44□□□□□ -2.18
Ssu72Q9CY97 Gm43512-201ENSMUST00000198495 176 ntBASIC1.44□□□□□ -2.18
Ssu72Q9CY97 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.44□□□□□ -2.18
Ssu72Q9CY97 Gm24208-201ENSMUST00000082783 135 ntBASIC1.44□□□□□ -2.18
Ssu72Q9CY97 Mir148b-201ENSMUST00000083626 97 ntBASIC1.44□□□□□ -2.18
Ssu72Q9CY97 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Ssu72Q9CY97 Gm22786-201ENSMUST00000104086 122 ntBASIC1.43□□□□□ -2.18
Ssu72Q9CY97 Gm24064-201ENSMUST00000157486 106 ntBASIC1.43□□□□□ -2.18
Ssu72Q9CY97 Mir1950-201ENSMUST00000158526 74 ntBASIC1.43□□□□□ -2.18
Ssu72Q9CY97 Gm27415-201ENSMUST00000183720 95 ntBASIC1.43□□□□□ -2.18
Ssu72Q9CY97 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Ssu72Q9CY97 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Ssu72Q9CY97 Snord69-201ENSMUST00000104024 80 ntBASIC1.42□□□□□ -2.18
Ssu72Q9CY97 Gm24199-201ENSMUST00000157808 136 ntBASIC1.42□□□□□ -2.18
Ssu72Q9CY97 Gm22522-201ENSMUST00000158271 151 ntBASIC1.42□□□□□ -2.18
Ssu72Q9CY97 Gm16399-201ENSMUST00000181423 219 ntBASIC1.42□□□□□ -2.18
Ssu72Q9CY97 Gm27420-201ENSMUST00000183823 79 ntBASIC1.42□□□□□ -2.18
Ssu72Q9CY97 Gm27987-201ENSMUST00000184023 93 ntBASIC1.42□□□□□ -2.18
Ssu72Q9CY97 Mir6352-201ENSMUST00000184495 116 ntBASIC1.42□□□□□ -2.18
Ssu72Q9CY97 Mir7017-201ENSMUST00000184894 62 ntBASIC1.42□□□□□ -2.18
Ssu72Q9CY97 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.42□□□□□ -2.18
Ssu72Q9CY97 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.42□□□□□ -2.18
Ssu72Q9CY97 Gm22723-201ENSMUST00000083820 129 ntBASIC1.42□□□□□ -2.18
Ssu72Q9CY97 Mir1187-201ENSMUST00000116936 122 ntBASIC1.41□□□□□ -2.18
Ssu72Q9CY97 Mir669n-201ENSMUST00000158636 54 ntBASIC1.41□□□□□ -2.18
Ssu72Q9CY97 Gm23293-201ENSMUST00000082552 104 ntBASIC1.41□□□□□ -2.18
Ssu72Q9CY97 Gm26922-201ENSMUST00000082687 72 ntBASIC1.41□□□□□ -2.18
Ssu72Q9CY97 Mir324-201ENSMUST00000083600 89 ntBASIC1.41□□□□□ -2.18
Ssu72Q9CY97 Mir500-201ENSMUST00000093600 92 ntBASIC1.41□□□□□ -2.18
Ssu72Q9CY97 Gm22761-201ENSMUST00000102278 96 ntBASIC1.4□□□□□ -2.19
Ssu72Q9CY97 Gm23011-201ENSMUST00000104148 132 ntBASIC1.4□□□□□ -2.19
Ssu72Q9CY97 Gm24500-201ENSMUST00000158447 124 ntBASIC1.4□□□□□ -2.19
Ssu72Q9CY97 Mir8090-201ENSMUST00000185078 136 ntBASIC1.4□□□□□ -2.19
Ssu72Q9CY97 Gm25854-201ENSMUST00000082792 72 ntBASIC1.4□□□□□ -2.19
Ssu72Q9CY97 Mir320-201ENSMUST00000083594 82 ntBASIC1.4□□□□□ -2.19
Ssu72Q9CY97 Gm24808-201ENSMUST00000157993 118 ntBASIC1.39□□□□□ -2.19
Ssu72Q9CY97 AC116319.1-201ENSMUST00000227765 222 ntBASIC1.39□□□□□ -2.19
Ssu72Q9CY97 Mir758-201ENSMUST00000103260 81 ntBASIC1.38□□□□□ -2.19
Ssu72Q9CY97 Gm23950-201ENSMUST00000104026 129 ntBASIC1.38□□□□□ -2.19
Ssu72Q9CY97 Gm24868-201ENSMUST00000157265 136 ntBASIC1.38□□□□□ -2.19
Ssu72Q9CY97 Gm23558-201ENSMUST00000157823 80 ntBASIC1.38□□□□□ -2.19
Ssu72Q9CY97 Gm24077-201ENSMUST00000158183 136 ntBASIC1.38□□□□□ -2.19
Ssu72Q9CY97 Gm24177-201ENSMUST00000158927 131 ntBASIC1.38□□□□□ -2.19
Ssu72Q9CY97 Gm44408-201ENSMUST00000200205 66 ntBASIC1.38□□□□□ -2.19
Ssu72Q9CY97 AC122335.1-201ENSMUST00000217587 175 ntBASIC1.38□□□□□ -2.19
Ssu72Q9CY97 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.37□□□□□ -2.19
Ssu72Q9CY97 Gm25417-201ENSMUST00000104212 131 ntBASIC1.37□□□□□ -2.19
Ssu72Q9CY97 Gm22551-201ENSMUST00000157795 103 ntBASIC1.37□□□□□ -2.19
Ssu72Q9CY97 Gm22788-201ENSMUST00000157876 61 ntBASIC1.37□□□□□ -2.19
Ssu72Q9CY97 Gm23056-201ENSMUST00000082803 111 ntBASIC1.37□□□□□ -2.19
Ssu72Q9CY97 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC1.37□□□□□ -2.19
Ssu72Q9CY97 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.37□□□□□ -2.19
Ssu72Q9CY97 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.37□□□□□ -2.19
Ssu72Q9CY97 Gm25759-201ENSMUST00000103988 129 ntBASIC1.36□□□□□ -2.19
Ssu72Q9CY97 Gm25836-201ENSMUST00000158918 123 ntBASIC1.36□□□□□ -2.19
Ssu72Q9CY97 Gm23291-201ENSMUST00000175611 78 ntBASIC1.36□□□□□ -2.19
Ssu72Q9CY97 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.36□□□□□ -2.19
Ssu72Q9CY97 Gm37579-201ENSMUST00000194291 142 ntBASIC1.36□□□□□ -2.19
Ssu72Q9CY97 Gm43944-201ENSMUST00000205220 120 ntBASIC1.36□□□□□ -2.19
Ssu72Q9CY97 Gm26207-201ENSMUST00000082909 104 ntBASIC1.36□□□□□ -2.19
Ssu72Q9CY97 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Ssu72Q9CY97 Gm26274-201ENSMUST00000157103 321 ntBASIC1.35□□□□□ -2.19
Ssu72Q9CY97 Gm25964-201ENSMUST00000157171 97 ntBASIC1.35□□□□□ -2.19
Ssu72Q9CY97 Gm23670-201ENSMUST00000157469 119 ntBASIC1.35□□□□□ -2.19
Ssu72Q9CY97 Mir3569-201ENSMUST00000185080 58 ntBASIC1.35□□□□□ -2.19
Ssu72Q9CY97 Gm38323-201ENSMUST00000192450 210 ntBASIC1.35□□□□□ -2.19
Ssu72Q9CY97 Gm43038-201ENSMUST00000202359 88 ntBASIC1.35□□□□□ -2.19
Ssu72Q9CY97 Mir377-201ENSMUST00000083504 68 ntBASIC1.35□□□□□ -2.19
Ssu72Q9CY97 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.19
Ssu72Q9CY97 Gm22466-201ENSMUST00000175278 69 ntBASIC1.34□□□□□ -2.19
Ssu72Q9CY97 Gm43907-201ENSMUST00000203128 117 ntBASIC1.34□□□□□ -2.19
Ssu72Q9CY97 Gm24311-201ENSMUST00000082570 104 ntBASIC1.34□□□□□ -2.19
Ssu72Q9CY97 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
Ssu72Q9CY97 Gm23991-201ENSMUST00000117033 93 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 237.9 ms