Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm26498-201ENSMUST00000177799 79 ntBASIC0.31□□□□□ -2.36
Ddx28Q9CWT6 Gm26230-201ENSMUST00000180141 79 ntBASIC0.31□□□□□ -2.36
Ddx28Q9CWT6 Mir219b-201ENSMUST00000198317 65 ntBASIC0.31□□□□□ -2.36
Ddx28Q9CWT6 Gm44828-201ENSMUST00000203745 106 ntBASIC0.31□□□□□ -2.36
Ddx28Q9CWT6 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.31□□□□□ -2.36
Ddx28Q9CWT6 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
Ddx28Q9CWT6 Mir764-201ENSMUST00000103259 108 ntBASIC0.3□□□□□ -2.36
Ddx28Q9CWT6 Snord64-201ENSMUST00000104003 67 ntBASIC0.3□□□□□ -2.36
Ddx28Q9CWT6 Gm23482-201ENSMUST00000104172 122 ntBASIC0.3□□□□□ -2.36
Ddx28Q9CWT6 Gm22431-201ENSMUST00000158545 107 ntBASIC0.3□□□□□ -2.36
Ddx28Q9CWT6 Mir3105-201ENSMUST00000175480 85 ntBASIC0.3□□□□□ -2.36
Ddx28Q9CWT6 Gm26116-201ENSMUST00000175600 77 ntBASIC0.3□□□□□ -2.36
Ddx28Q9CWT6 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
Ddx28Q9CWT6 Gm26152-201ENSMUST00000157427 101 ntBASIC0.29□□□□□ -2.36
Ddx28Q9CWT6 Gm27475-201ENSMUST00000183420 61 ntBASIC0.29□□□□□ -2.36
Ddx28Q9CWT6 Mir7065-201ENSMUST00000185110 61 ntBASIC0.29□□□□□ -2.36
Ddx28Q9CWT6 Gm24524-201ENSMUST00000082925 170 ntBASIC0.29□□□□□ -2.36
Ddx28Q9CWT6 Gm23969-201ENSMUST00000083324 74 ntBASIC0.29□□□□□ -2.36
Ddx28Q9CWT6 Mir1a-1-201ENSMUST00000093635 77 ntBASIC0.29□□□□□ -2.36
Ddx28Q9CWT6 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.28□□□□□ -2.36
Ddx28Q9CWT6 Gm25408-201ENSMUST00000104104 133 ntBASIC0.28□□□□□ -2.36
Ddx28Q9CWT6 Mir3473d-201ENSMUST00000175346 81 ntBASIC0.28□□□□□ -2.36
Ddx28Q9CWT6 Gm22286-201ENSMUST00000179708 107 ntBASIC0.28□□□□□ -2.36
Ddx28Q9CWT6 Gm27851-201ENSMUST00000183529 63 ntBASIC0.28□□□□□ -2.36
Ddx28Q9CWT6 Gm43927-201ENSMUST00000204599 117 ntBASIC0.28□□□□□ -2.36
Ddx28Q9CWT6 Gm25899-201ENSMUST00000082672 141 ntBASIC0.28□□□□□ -2.36
Ddx28Q9CWT6 Gm22303-201ENSMUST00000082686 122 ntBASIC0.28□□□□□ -2.36
Ddx28Q9CWT6 Mir802-201ENSMUST00000103258 97 ntBASIC0.27□□□□□ -2.37
Ddx28Q9CWT6 Gm23708-201ENSMUST00000104367 123 ntBASIC0.27□□□□□ -2.37
Ddx28Q9CWT6 Gm22772-201ENSMUST00000104451 121 ntBASIC0.27□□□□□ -2.37
Ddx28Q9CWT6 Gm24842-201ENSMUST00000158681 54 ntBASIC0.27□□□□□ -2.37
Ddx28Q9CWT6 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
Ddx28Q9CWT6 Gm24208-201ENSMUST00000082783 135 ntBASIC0.27□□□□□ -2.37
Ddx28Q9CWT6 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
Ddx28Q9CWT6 Gm22788-201ENSMUST00000157876 61 ntBASIC0.26□□□□□ -2.37
Ddx28Q9CWT6 Mir7079-201ENSMUST00000184697 69 ntBASIC0.26□□□□□ -2.37
Ddx28Q9CWT6 Gm10813-201ENSMUST00000099936 90 ntBASIC0.26□□□□□ -2.37
Ddx28Q9CWT6 Gm22196-201ENSMUST00000116865 109 ntBASIC0.25□□□□□ -2.37
Ddx28Q9CWT6 Gm23986-201ENSMUST00000157144 63 ntBASIC0.25□□□□□ -2.37
Ddx28Q9CWT6 Gm23900-201ENSMUST00000157569 108 ntBASIC0.25□□□□□ -2.37
Ddx28Q9CWT6 Scarna8-201ENSMUST00000158333 131 ntBASIC0.25□□□□□ -2.37
Ddx28Q9CWT6 Gm22638-201ENSMUST00000179674 107 ntBASIC0.25□□□□□ -2.37
Ddx28Q9CWT6 Gm26133-201ENSMUST00000157363 100 ntBASIC0.24□□□□□ -2.37
Ddx28Q9CWT6 Gm38298-201ENSMUST00000193578 118 ntBASIC0.24□□□□□ -2.37
Ddx28Q9CWT6 Gm22297-201ENSMUST00000083312 106 ntBASIC0.24□□□□□ -2.37
Ddx28Q9CWT6 Gm25006-201ENSMUST00000083813 107 ntBASIC0.24□□□□□ -2.37
Ddx28Q9CWT6 Gm26369-201ENSMUST00000157825 100 ntBASIC0.23□□□□□ -2.37
Ddx28Q9CWT6 Gm23351-201ENSMUST00000158427 125 ntBASIC0.23□□□□□ -2.37
Ddx28Q9CWT6 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC0.23□□□□□ -2.37
Ddx28Q9CWT6 Gm25633-201ENSMUST00000178565 107 ntBASIC0.23□□□□□ -2.37
Ddx28Q9CWT6 Gm20734-201ENSMUST00000216939 193 ntBASIC0.23□□□□□ -2.37
Ddx28Q9CWT6 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.23□□□□□ -2.37
Ddx28Q9CWT6 Gm22558-201ENSMUST00000157326 95 ntBASIC0.22□□□□□ -2.37
Ddx28Q9CWT6 Gm22336-201ENSMUST00000157719 107 ntBASIC0.22□□□□□ -2.37
Ddx28Q9CWT6 Gm23783-201ENSMUST00000157941 102 ntBASIC0.22□□□□□ -2.37
Ddx28Q9CWT6 Gm24772-201ENSMUST00000158507 110 ntBASIC0.22□□□□□ -2.37
Ddx28Q9CWT6 mt-Tt-201ENSMUST00000082422 67 ntBASIC0.22□□□□□ -2.37
Ddx28Q9CWT6 Gm26062-201ENSMUST00000083379 107 ntBASIC0.22□□□□□ -2.37
Ddx28Q9CWT6 Mir224-201ENSMUST00000083608 82 ntBASIC0.22□□□□□ -2.37
Ddx28Q9CWT6 Mir710-201ENSMUST00000102088 110 ntBASIC0.21□□□□□ -2.38
Ddx28Q9CWT6 Gm23578-201ENSMUST00000103943 104 ntBASIC0.21□□□□□ -2.38
Ddx28Q9CWT6 Gm24555-201ENSMUST00000104548 124 ntBASIC0.21□□□□□ -2.38
Ddx28Q9CWT6 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.21□□□□□ -2.38
Ddx28Q9CWT6 Gm25056-201ENSMUST00000157372 62 ntBASIC0.21□□□□□ -2.38
Ddx28Q9CWT6 Gm25014-201ENSMUST00000158401 103 ntBASIC0.21□□□□□ -2.38
Ddx28Q9CWT6 Mir3108-201ENSMUST00000175500 79 ntBASIC0.21□□□□□ -2.38
Ddx28Q9CWT6 AC164561.1-201ENSMUST00000220414 115 ntBASIC0.21□□□□□ -2.38
Ddx28Q9CWT6 Gm25787-201ENSMUST00000104709 92 ntBASIC0.2□□□□□ -2.38
Ddx28Q9CWT6 Gm23654-201ENSMUST00000116758 126 ntBASIC0.2□□□□□ -2.38
Ddx28Q9CWT6 Gm24833-201ENSMUST00000116775 120 ntBASIC0.2□□□□□ -2.38
Ddx28Q9CWT6 Gm44490-201ENSMUST00000198566 127 ntBASIC0.2□□□□□ -2.38
Ddx28Q9CWT6 Gm45197-201ENSMUST00000205288 151 ntBASIC0.2□□□□□ -2.38
Ddx28Q9CWT6 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
Ddx28Q9CWT6 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.19□□□□□ -2.38
Ddx28Q9CWT6 Mir1197-201ENSMUST00000117037 120 ntBASIC0.19□□□□□ -2.38
Ddx28Q9CWT6 Gm24399-201ENSMUST00000157869 74 ntBASIC0.19□□□□□ -2.38
Ddx28Q9CWT6 Gm25618-201ENSMUST00000179484 107 ntBASIC0.19□□□□□ -2.38
Ddx28Q9CWT6 Mir6365-201ENSMUST00000183990 101 ntBASIC0.19□□□□□ -2.38
Ddx28Q9CWT6 Mir7077-201ENSMUST00000183991 57 ntBASIC0.19□□□□□ -2.38
Ddx28Q9CWT6 Gm38295-201ENSMUST00000191951 151 ntBASIC0.19□□□□□ -2.38
Ddx28Q9CWT6 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.19□□□□□ -2.38
Ddx28Q9CWT6 mt-Tc-201ENSMUST00000082400 66 ntBASIC0.19□□□□□ -2.38
Ddx28Q9CWT6 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.18□□□□□ -2.38
Ddx28Q9CWT6 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC0.18□□□□□ -2.38
Ddx28Q9CWT6 Gm44327-201ENSMUST00000200068 117 ntBASIC0.18□□□□□ -2.38
Ddx28Q9CWT6 Gm24073-201ENSMUST00000158177 106 ntBASIC0.17□□□□□ -2.38
Ddx28Q9CWT6 Gm23384-201ENSMUST00000158593 103 ntBASIC0.17□□□□□ -2.38
Ddx28Q9CWT6 Gm28001-201ENSMUST00000183561 117 ntBASIC0.17□□□□□ -2.38
Ddx28Q9CWT6 Gm44345-201ENSMUST00000199560 135 ntBASIC0.17□□□□□ -2.38
Ddx28Q9CWT6 Gm23507-201ENSMUST00000083078 107 ntBASIC0.17□□□□□ -2.38
Ddx28Q9CWT6 Snord78-201ENSMUST00000104032 66 ntBASIC0.16□□□□□ -2.38
Ddx28Q9CWT6 Gm23821-201ENSMUST00000158738 106 ntBASIC0.16□□□□□ -2.38
Ddx28Q9CWT6 Mir8107-201ENSMUST00000184024 117 ntBASIC0.16□□□□□ -2.38
Ddx28Q9CWT6 Gm27980-201ENSMUST00000184094 169 ntBASIC0.16□□□□□ -2.38
Ddx28Q9CWT6 Gm28270-201ENSMUST00000188550 109 ntBASIC0.16□□□□□ -2.38
Ddx28Q9CWT6 Gm28328-201ENSMUST00000188869 109 ntBASIC0.16□□□□□ -2.38
Ddx28Q9CWT6 Snord80-201ENSMUST00000083801 81 ntBASIC0.16□□□□□ -2.38
Ddx28Q9CWT6 Gm24648-201ENSMUST00000157111 132 ntBASIC0.15□□□□□ -2.39
Ddx28Q9CWT6 Gm22100-201ENSMUST00000157926 63 ntBASIC0.15□□□□□ -2.39
Ddx28Q9CWT6 Gm25978-201ENSMUST00000158698 90 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 76,532 protein–RNA pairs in 154.8 ms