Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Gm26158-201ENSMUST00000158973 119 ntBASIC1.36□□□□□ -2.19
Pcdha1Q91Y21 Gm24801-201ENSMUST00000178503 105 ntBASIC1.36□□□□□ -2.19
Pcdha1Q91Y21 Gm38323-201ENSMUST00000192450 210 ntBASIC1.36□□□□□ -2.19
Pcdha1Q91Y21 Gm45197-201ENSMUST00000205288 151 ntBASIC1.36□□□□□ -2.19
Pcdha1Q91Y21 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Pcdha1Q91Y21 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.35□□□□□ -2.19
Pcdha1Q91Y21 Snord13-201ENSMUST00000157627 104 ntBASIC1.35□□□□□ -2.19
Pcdha1Q91Y21 Mir6237-201ENSMUST00000183808 91 ntBASIC1.35□□□□□ -2.19
Pcdha1Q91Y21 Mir7063-201ENSMUST00000184158 91 ntBASIC1.35□□□□□ -2.19
Pcdha1Q91Y21 Gm25635-201ENSMUST00000082675 131 ntBASIC1.35□□□□□ -2.19
Pcdha1Q91Y21 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.35□□□□□ -2.19
Pcdha1Q91Y21 Snord69-201ENSMUST00000104024 80 ntBASIC1.34□□□□□ -2.19
Pcdha1Q91Y21 Gm25600-201ENSMUST00000158357 106 ntBASIC1.34□□□□□ -2.19
Pcdha1Q91Y21 Gm23917-201ENSMUST00000175256 98 ntBASIC1.34□□□□□ -2.19
Pcdha1Q91Y21 Mir3968-201ENSMUST00000175355 100 ntBASIC1.34□□□□□ -2.19
Pcdha1Q91Y21 mt-Tn-201ENSMUST00000082399 71 ntBASIC1.34□□□□□ -2.19
Pcdha1Q91Y21 Gm26202-201ENSMUST00000082910 65 ntBASIC1.34□□□□□ -2.19
Pcdha1Q91Y21 Gm22251-201ENSMUST00000083216 107 ntBASIC1.34□□□□□ -2.19
Pcdha1Q91Y21 Mir500-201ENSMUST00000093600 92 ntBASIC1.34□□□□□ -2.19
Pcdha1Q91Y21 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.33□□□□□ -2.2
Pcdha1Q91Y21 Gm22672-201ENSMUST00000104414 134 ntBASIC1.33□□□□□ -2.2
Pcdha1Q91Y21 Gm23261-201ENSMUST00000158316 136 ntBASIC1.33□□□□□ -2.2
Pcdha1Q91Y21 Gm22466-201ENSMUST00000175278 69 ntBASIC1.33□□□□□ -2.2
Pcdha1Q91Y21 Gm44932-201ENSMUST00000206799 121 ntBASIC1.33□□□□□ -2.2
Pcdha1Q91Y21 Mir30a-201ENSMUST00000083471 71 ntBASIC1.33□□□□□ -2.2
Pcdha1Q91Y21 Gm23661-201ENSMUST00000122630 87 ntBASIC1.32□□□□□ -2.2
Pcdha1Q91Y21 Gm22129-201ENSMUST00000179034 107 ntBASIC1.32□□□□□ -2.2
Pcdha1Q91Y21 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC1.32□□□□□ -2.2
Pcdha1Q91Y21 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
Pcdha1Q91Y21 Gm25022-201ENSMUST00000102205 83 ntBASIC1.31□□□□□ -2.2
Pcdha1Q91Y21 Gm22780-201ENSMUST00000104084 132 ntBASIC1.31□□□□□ -2.2
Pcdha1Q91Y21 Gm23329-201ENSMUST00000157415 108 ntBASIC1.31□□□□□ -2.2
Pcdha1Q91Y21 Gm26029-201ENSMUST00000158659 132 ntBASIC1.31□□□□□ -2.2
Pcdha1Q91Y21 Gm25974-201ENSMUST00000158701 94 ntBASIC1.31□□□□□ -2.2
Pcdha1Q91Y21 Gm24154-201ENSMUST00000175261 130 ntBASIC1.31□□□□□ -2.2
Pcdha1Q91Y21 Mir5619-201ENSMUST00000176065 61 ntBASIC1.31□□□□□ -2.2
Pcdha1Q91Y21 Mir467a-6-201ENSMUST00000177790 83 ntBASIC1.31□□□□□ -2.2
Pcdha1Q91Y21 Mir467a-3-201ENSMUST00000178082 83 ntBASIC1.31□□□□□ -2.2
Pcdha1Q91Y21 Mir467a-7-201ENSMUST00000178635 83 ntBASIC1.31□□□□□ -2.2
Pcdha1Q91Y21 Mir467a-10-201ENSMUST00000179320 83 ntBASIC1.31□□□□□ -2.2
Pcdha1Q91Y21 Mir467a-5-201ENSMUST00000179352 83 ntBASIC1.31□□□□□ -2.2
Pcdha1Q91Y21 Mir467a-2-201ENSMUST00000179447 83 ntBASIC1.31□□□□□ -2.2
Pcdha1Q91Y21 Mir467a-9-201ENSMUST00000179752 83 ntBASIC1.31□□□□□ -2.2
Pcdha1Q91Y21 Mir467a-4-201ENSMUST00000179923 83 ntBASIC1.31□□□□□ -2.2
Pcdha1Q91Y21 Mir467a-8-201ENSMUST00000180070 83 ntBASIC1.31□□□□□ -2.2
Pcdha1Q91Y21 Gm24252-201ENSMUST00000083700 132 ntBASIC1.31□□□□□ -2.2
Pcdha1Q91Y21 Gm22559-201ENSMUST00000157329 134 ntBASIC1.3□□□□□ -2.2
Pcdha1Q91Y21 Gm24549-201ENSMUST00000158647 139 ntBASIC1.3□□□□□ -2.2
Pcdha1Q91Y21 Gm22663-201ENSMUST00000158721 102 ntBASIC1.3□□□□□ -2.2
Pcdha1Q91Y21 Gm25693-201ENSMUST00000175443 85 ntBASIC1.3□□□□□ -2.2
Pcdha1Q91Y21 AC116319.1-201ENSMUST00000227765 222 ntBASIC1.3□□□□□ -2.2
Pcdha1Q91Y21 Mir211-201ENSMUST00000083651 106 ntBASIC1.3□□□□□ -2.2
Pcdha1Q91Y21 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
Pcdha1Q91Y21 Gm26089-201ENSMUST00000157898 107 ntBASIC1.29□□□□□ -2.2
Pcdha1Q91Y21 Gm22212-201ENSMUST00000158096 106 ntBASIC1.29□□□□□ -2.2
Pcdha1Q91Y21 Gm23636-201ENSMUST00000175070 95 ntBASIC1.29□□□□□ -2.2
Pcdha1Q91Y21 Gm27297-201ENSMUST00000183395 105 ntBASIC1.29□□□□□ -2.2
Pcdha1Q91Y21 Mir7059-201ENSMUST00000184825 59 ntBASIC1.29□□□□□ -2.2
Pcdha1Q91Y21 Gm42533-201ENSMUST00000196247 157 ntBASIC1.29□□□□□ -2.2
Pcdha1Q91Y21 Gm23301-201ENSMUST00000082713 65 ntBASIC1.29□□□□□ -2.2
Pcdha1Q91Y21 Gm24527-201ENSMUST00000082920 107 ntBASIC1.29□□□□□ -2.2
Pcdha1Q91Y21 Gm23038-201ENSMUST00000083873 104 ntBASIC1.29□□□□□ -2.2
Pcdha1Q91Y21 Gm45265-201ENSMUST00000210852 2497 ntBASIC1.29□□□□□ -2.2
Pcdha1Q91Y21 Gm24865-201ENSMUST00000103246 96 ntBASIC1.28□□□□□ -2.2
Pcdha1Q91Y21 Gm22030-201ENSMUST00000116942 63 ntBASIC1.28□□□□□ -2.2
Pcdha1Q91Y21 Gm24290-201ENSMUST00000157634 96 ntBASIC1.28□□□□□ -2.2
Pcdha1Q91Y21 Gm24009-201ENSMUST00000157734 93 ntBASIC1.28□□□□□ -2.2
Pcdha1Q91Y21 Gm23349-201ENSMUST00000158432 98 ntBASIC1.28□□□□□ -2.2
Pcdha1Q91Y21 Gm24221-201ENSMUST00000158833 313 ntBASIC1.28□□□□□ -2.2
Pcdha1Q91Y21 Mir3079-201ENSMUST00000175428 90 ntBASIC1.28□□□□□ -2.2
Pcdha1Q91Y21 Gm44483-201ENSMUST00000197203 97 ntBASIC1.28□□□□□ -2.2
Pcdha1Q91Y21 Gm6272-201ENSMUST00000121256 171 ntBASIC1.27□□□□□ -2.21
Pcdha1Q91Y21 Gm22074-201ENSMUST00000158595 113 ntBASIC1.27□□□□□ -2.21
Pcdha1Q91Y21 Gm29535-201ENSMUST00000185723 109 ntBASIC1.27□□□□□ -2.21
Pcdha1Q91Y21 Gm28143-201ENSMUST00000191082 109 ntBASIC1.27□□□□□ -2.21
Pcdha1Q91Y21 Gm22950-201ENSMUST00000082776 107 ntBASIC1.27□□□□□ -2.21
Pcdha1Q91Y21 Gm23245-201ENSMUST00000083370 135 ntBASIC1.27□□□□□ -2.21
Pcdha1Q91Y21 Gm22673-201ENSMUST00000104415 131 ntBASIC1.26□□□□□ -2.21
Pcdha1Q91Y21 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1.26□□□□□ -2.21
Pcdha1Q91Y21 Gm24686-201ENSMUST00000157755 93 ntBASIC1.26□□□□□ -2.21
Pcdha1Q91Y21 AC122327.1-201ENSMUST00000220778 108 ntBASIC1.26□□□□□ -2.21
Pcdha1Q91Y21 Gm23652-201ENSMUST00000116752 107 ntBASIC1.25□□□□□ -2.21
Pcdha1Q91Y21 Gm22729-201ENSMUST00000158088 129 ntBASIC1.25□□□□□ -2.21
Pcdha1Q91Y21 Gm25449-201ENSMUST00000179389 79 ntBASIC1.25□□□□□ -2.21
Pcdha1Q91Y21 Gm27711-201ENSMUST00000183802 118 ntBASIC1.25□□□□□ -2.21
Pcdha1Q91Y21 Gm22149-201ENSMUST00000104442 136 ntBASIC1.24□□□□□ -2.21
Pcdha1Q91Y21 Gm26301-201ENSMUST00000104813 95 ntBASIC1.24□□□□□ -2.21
Pcdha1Q91Y21 Gm12432-201ENSMUST00000119540 186 ntBASIC1.24□□□□□ -2.21
Pcdha1Q91Y21 Gm26425-201ENSMUST00000122529 82 ntBASIC1.24□□□□□ -2.21
Pcdha1Q91Y21 Gm22786-201ENSMUST00000104086 122 ntBASIC1.23□□□□□ -2.21
Pcdha1Q91Y21 Gm23328-201ENSMUST00000157418 132 ntBASIC1.23□□□□□ -2.21
Pcdha1Q91Y21 Gm22541-201ENSMUST00000158165 127 ntBASIC1.23□□□□□ -2.21
Pcdha1Q91Y21 Mir1954-201ENSMUST00000175595 86 ntBASIC1.23□□□□□ -2.21
Pcdha1Q91Y21 Gm38295-201ENSMUST00000191951 151 ntBASIC1.23□□□□□ -2.21
Pcdha1Q91Y21 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Pcdha1Q91Y21 Gm25274-201ENSMUST00000104296 135 ntBASIC1.22□□□□□ -2.21
Pcdha1Q91Y21 Gm24648-201ENSMUST00000157111 132 ntBASIC1.22□□□□□ -2.21
Pcdha1Q91Y21 Gm26104-201ENSMUST00000157250 108 ntBASIC1.22□□□□□ -2.21
Pcdha1Q91Y21 Gm25056-201ENSMUST00000157372 62 ntBASIC1.22□□□□□ -2.21
Pcdha1Q91Y21 Gm22485-201ENSMUST00000157990 109 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 151 ms