Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Gm23342-201ENSMUST00000158958 115 ntBASIC2.12□□□□□ -2.07
Usp3Q91W36 Mir6901-201ENSMUST00000185062 62 ntBASIC2.12□□□□□ -2.07
Usp3Q91W36 AC158537.2-201ENSMUST00000223575 150 ntBASIC2.12□□□□□ -2.07
Usp3Q91W36 Mir322-201ENSMUST00000083484 95 ntBASIC2.12□□□□□ -2.07
Usp3Q91W36 Mir222-201ENSMUST00000083537 79 ntBASIC2.12□□□□□ -2.07
Usp3Q91W36 Gm24494-201ENSMUST00000083804 81 ntBASIC2.12□□□□□ -2.07
Usp3Q91W36 Mir216b-201ENSMUST00000102363 86 ntBASIC2.11□□□□□ -2.07
Usp3Q91W36 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Usp3Q91W36 Gm25460-201ENSMUST00000157954 127 ntBASIC2.11□□□□□ -2.07
Usp3Q91W36 Gm25366-201ENSMUST00000158845 124 ntBASIC2.11□□□□□ -2.07
Usp3Q91W36 Mir7016-201ENSMUST00000184308 72 ntBASIC2.11□□□□□ -2.07
Usp3Q91W36 Mir7226-201ENSMUST00000184953 60 ntBASIC2.11□□□□□ -2.07
Usp3Q91W36 Gm26274-201ENSMUST00000157103 321 ntBASIC2.1□□□□□ -2.07
Usp3Q91W36 Gm24478-201ENSMUST00000157439 158 ntBASIC2.1□□□□□ -2.07
Usp3Q91W36 Gm24290-201ENSMUST00000157634 96 ntBASIC2.1□□□□□ -2.07
Usp3Q91W36 Gm22727-201ENSMUST00000158090 116 ntBASIC2.1□□□□□ -2.07
Usp3Q91W36 Gm25693-201ENSMUST00000175443 85 ntBASIC2.1□□□□□ -2.07
Usp3Q91W36 Mir3064-201ENSMUST00000175532 67 ntBASIC2.1□□□□□ -2.07
Usp3Q91W36 Mir7014-201ENSMUST00000183853 63 ntBASIC2.1□□□□□ -2.07
Usp3Q91W36 Gm43944-201ENSMUST00000205220 120 ntBASIC2.1□□□□□ -2.07
Usp3Q91W36 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Usp3Q91W36 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Usp3Q91W36 Gm22164-201ENSMUST00000158413 106 ntBASIC2.09□□□□□ -2.07
Usp3Q91W36 Gm43907-201ENSMUST00000203128 117 ntBASIC2.09□□□□□ -2.07
Usp3Q91W36 Gm45654-201ENSMUST00000210980 123 ntBASIC2.09□□□□□ -2.07
Usp3Q91W36 Gm23301-201ENSMUST00000082713 65 ntBASIC2.09□□□□□ -2.07
Usp3Q91W36 Snora75-201ENSMUST00000082903 133 ntBASIC2.09□□□□□ -2.07
Usp3Q91W36 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Usp3Q91W36 Gm22785-201ENSMUST00000104087 132 ntBASIC2.08□□□□□ -2.08
Usp3Q91W36 Gm23500-201ENSMUST00000157735 98 ntBASIC2.08□□□□□ -2.08
Usp3Q91W36 Gm22541-201ENSMUST00000158165 127 ntBASIC2.08□□□□□ -2.08
Usp3Q91W36 Gm22664-201ENSMUST00000158719 105 ntBASIC2.08□□□□□ -2.08
Usp3Q91W36 Gm22264-201ENSMUST00000178200 107 ntBASIC2.08□□□□□ -2.08
Usp3Q91W36 Gm44488-201ENSMUST00000199467 119 ntBASIC2.08□□□□□ -2.08
Usp3Q91W36 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.08□□□□□ -2.08
Usp3Q91W36 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.07□□□□□ -2.08
Usp3Q91W36 Gm25416-201ENSMUST00000104221 107 ntBASIC2.07□□□□□ -2.08
Usp3Q91W36 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.07□□□□□ -2.08
Usp3Q91W36 AC160550.1-201ENSMUST00000228659 181 ntBASIC2.07□□□□□ -2.08
Usp3Q91W36 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Usp3Q91W36 Mir7217-201ENSMUST00000200304 62 ntBASIC2.06□□□□□ -2.08
Usp3Q91W36 AC159885.1-201ENSMUST00000222221 199 ntBASIC2.06□□□□□ -2.08
Usp3Q91W36 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC2.05□□□□□ -2.08
Usp3Q91W36 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Usp3Q91W36 Mir1933-201ENSMUST00000158930 88 ntBASIC2.05□□□□□ -2.08
Usp3Q91W36 Mir344d-3-201ENSMUST00000175458 80 ntBASIC2.05□□□□□ -2.08
Usp3Q91W36 Mir6997-201ENSMUST00000184313 71 ntBASIC2.05□□□□□ -2.08
Usp3Q91W36 Gm26029-201ENSMUST00000158659 132 ntBASIC2.04□□□□□ -2.08
Usp3Q91W36 Gm23339-201ENSMUST00000158962 139 ntBASIC2.04□□□□□ -2.08
Usp3Q91W36 CT485608.2-201ENSMUST00000227210 291 ntBASIC2.04□□□□□ -2.08
Usp3Q91W36 Gm24983-201ENSMUST00000104457 69 ntBASIC2.03□□□□□ -2.08
Usp3Q91W36 Gm11857-201ENSMUST00000119817 324 ntBASIC2.03□□□□□ -2.08
Usp3Q91W36 Gm23114-201ENSMUST00000158478 117 ntBASIC2.03□□□□□ -2.08
Usp3Q91W36 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.03□□□□□ -2.08
Usp3Q91W36 Gm25068-201ENSMUST00000103895 110 ntBASIC2.02□□□□□ -2.09
Usp3Q91W36 Gm25402-201ENSMUST00000082966 131 ntBASIC2.02□□□□□ -2.09
Usp3Q91W36 Gm24134-201ENSMUST00000083361 71 ntBASIC2.02□□□□□ -2.09
Usp3Q91W36 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Usp3Q91W36 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
Usp3Q91W36 Gm25705-201ENSMUST00000083119 104 ntBASIC2.01□□□□□ -2.09
Usp3Q91W36 Gm23950-201ENSMUST00000104026 129 ntBASIC2□□□□□ -2.09
Usp3Q91W36 Mir876-201ENSMUST00000104659 81 ntBASIC2□□□□□ -2.09
Usp3Q91W36 Gm25552-201ENSMUST00000158081 91 ntBASIC2□□□□□ -2.09
Usp3Q91W36 Gm22406-201ENSMUST00000174923 93 ntBASIC2□□□□□ -2.09
Usp3Q91W36 Gm22466-201ENSMUST00000175278 69 ntBASIC2□□□□□ -2.09
Usp3Q91W36 Mir126a-201ENSMUST00000083606 73 ntBASIC2□□□□□ -2.09
Usp3Q91W36 AC164629.4-201ENSMUST00000218505 3247 ntBASIC2□□□□□ -2.09
Usp3Q91W36 Gm25496-201ENSMUST00000104430 120 ntBASIC1.99□□□□□ -2.09
Usp3Q91W36 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.99□□□□□ -2.09
Usp3Q91W36 Gm43512-201ENSMUST00000198495 176 ntBASIC1.99□□□□□ -2.09
Usp3Q91W36 Gm23991-201ENSMUST00000117033 93 ntBASIC1.98□□□□□ -2.09
Usp3Q91W36 Mir6406-201ENSMUST00000183592 120 ntBASIC1.98□□□□□ -2.09
Usp3Q91W36 Gm25820-202ENSMUST00000197479 128 ntBASIC1.98□□□□□ -2.09
Usp3Q91W36 Mir7118-201ENSMUST00000197760 61 ntBASIC1.98□□□□□ -2.09
Usp3Q91W36 Mir758-201ENSMUST00000103260 81 ntBASIC1.97□□□□□ -2.09
Usp3Q91W36 Gm23109-201ENSMUST00000116867 126 ntBASIC1.97□□□□□ -2.09
Usp3Q91W36 Gm23469-201ENSMUST00000157131 104 ntBASIC1.97□□□□□ -2.09
Usp3Q91W36 Gm22099-201ENSMUST00000157925 123 ntBASIC1.97□□□□□ -2.09
Usp3Q91W36 Gm24154-201ENSMUST00000175261 130 ntBASIC1.97□□□□□ -2.09
Usp3Q91W36 Gm27420-201ENSMUST00000183823 79 ntBASIC1.97□□□□□ -2.09
Usp3Q91W36 Gm44384-201ENSMUST00000200208 114 ntBASIC1.97□□□□□ -2.09
Usp3Q91W36 Mir30a-201ENSMUST00000083471 71 ntBASIC1.97□□□□□ -2.09
Usp3Q91W36 Mir30d-201ENSMUST00000083503 82 ntBASIC1.97□□□□□ -2.09
Usp3Q91W36 Gm24271-201ENSMUST00000102327 111 ntBASIC1.96□□□□□ -2.1
Usp3Q91W36 Mir669n-201ENSMUST00000158636 54 ntBASIC1.96□□□□□ -2.1
Usp3Q91W36 Gm18433-201ENSMUST00000192747 197 ntBASIC1.96□□□□□ -2.1
Usp3Q91W36 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC1.96□□□□□ -2.1
Usp3Q91W36 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC1.96□□□□□ -2.1
Usp3Q91W36 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.96□□□□□ -2.1
Usp3Q91W36 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Usp3Q91W36 Mir7026-201ENSMUST00000184384 67 ntBASIC1.95□□□□□ -2.1
Usp3Q91W36 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.95□□□□□ -2.1
Usp3Q91W36 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
Usp3Q91W36 Gm22551-201ENSMUST00000157795 103 ntBASIC1.94□□□□□ -2.1
Usp3Q91W36 Snord2-201ENSMUST00000157899 69 ntBASIC1.94□□□□□ -2.1
Usp3Q91W36 Gm22011-201ENSMUST00000158790 123 ntBASIC1.94□□□□□ -2.1
Usp3Q91W36 Gm44396-201ENSMUST00000199843 114 ntBASIC1.94□□□□□ -2.1
Usp3Q91W36 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.94□□□□□ -2.1
Usp3Q91W36 Snord96a-201ENSMUST00000082791 81 ntBASIC1.94□□□□□ -2.1
Usp3Q91W36 Gm22750-201ENSMUST00000102076 103 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 147.2 ms