Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm24988-201ENSMUST00000104460 121 ntBASIC1.49□□□□□ -2.17
Ccdc9Q8VC31 Gm23528-201ENSMUST00000104571 132 ntBASIC1.49□□□□□ -2.17
Ccdc9Q8VC31 Gm25847-201ENSMUST00000116793 96 ntBASIC1.49□□□□□ -2.17
Ccdc9Q8VC31 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC1.49□□□□□ -2.17
Ccdc9Q8VC31 Gm26478-201ENSMUST00000122611 133 ntBASIC1.49□□□□□ -2.17
Ccdc9Q8VC31 Gm22205-201ENSMUST00000122655 71 ntBASIC1.49□□□□□ -2.17
Ccdc9Q8VC31 Gm24384-201ENSMUST00000122693 75 ntBASIC1.49□□□□□ -2.17
Ccdc9Q8VC31 Gm23558-201ENSMUST00000157823 80 ntBASIC1.49□□□□□ -2.17
Ccdc9Q8VC31 Gm25618-201ENSMUST00000179484 107 ntBASIC1.49□□□□□ -2.17
Ccdc9Q8VC31 Gm23410-201ENSMUST00000179967 107 ntBASIC1.49□□□□□ -2.17
Ccdc9Q8VC31 Mir6369-201ENSMUST00000183772 106 ntBASIC1.49□□□□□ -2.17
Ccdc9Q8VC31 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC1.49□□□□□ -2.17
Ccdc9Q8VC31 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC1.49□□□□□ -2.17
Ccdc9Q8VC31 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC1.49□□□□□ -2.17
Ccdc9Q8VC31 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC1.49□□□□□ -2.17
Ccdc9Q8VC31 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC1.49□□□□□ -2.17
Ccdc9Q8VC31 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC1.49□□□□□ -2.17
Ccdc9Q8VC31 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC1.49□□□□□ -2.17
Ccdc9Q8VC31 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC1.49□□□□□ -2.17
Ccdc9Q8VC31 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC1.49□□□□□ -2.17
Ccdc9Q8VC31 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC1.49□□□□□ -2.17
Ccdc9Q8VC31 Gm22505-201ENSMUST00000082956 108 ntBASIC1.49□□□□□ -2.17
Ccdc9Q8VC31 Gm22363-201ENSMUST00000083100 108 ntBASIC1.49□□□□□ -2.17
Ccdc9Q8VC31 Gm23814-201ENSMUST00000083230 102 ntBASIC1.49□□□□□ -2.17
Ccdc9Q8VC31 Gm16539-201ENSMUST00000160086 327 ntBASIC1.48□□□□□ -2.17
Ccdc9Q8VC31 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Ccdc9Q8VC31 Gm23122-201ENSMUST00000157645 103 ntBASIC1.47□□□□□ -2.17
Ccdc9Q8VC31 Gm23763-201ENSMUST00000158345 60 ntBASIC1.47□□□□□ -2.17
Ccdc9Q8VC31 Snora24-201ENSMUST00000174989 130 ntBASIC1.47□□□□□ -2.17
Ccdc9Q8VC31 Mir6962-201ENSMUST00000199512 63 ntBASIC1.47□□□□□ -2.17
Ccdc9Q8VC31 Gm24523-201ENSMUST00000083965 132 ntBASIC1.47□□□□□ -2.17
Ccdc9Q8VC31 Gm26082-201ENSMUST00000104070 127 ntBASIC1.46□□□□□ -2.18
Ccdc9Q8VC31 Gm25417-201ENSMUST00000104212 131 ntBASIC1.46□□□□□ -2.18
Ccdc9Q8VC31 Gm23336-201ENSMUST00000117023 123 ntBASIC1.46□□□□□ -2.18
Ccdc9Q8VC31 Gm22732-201ENSMUST00000158093 121 ntBASIC1.46□□□□□ -2.18
Ccdc9Q8VC31 Gm26038-201ENSMUST00000158151 106 ntBASIC1.46□□□□□ -2.18
Ccdc9Q8VC31 Gm22095-201ENSMUST00000158984 150 ntBASIC1.46□□□□□ -2.18
Ccdc9Q8VC31 Mir7675-201ENSMUST00000184262 58 ntBASIC1.46□□□□□ -2.18
Ccdc9Q8VC31 AC141438.3-201ENSMUST00000215632 202 ntBASIC1.46□□□□□ -2.18
Ccdc9Q8VC31 Scarna9-201ENSMUST00000104318 70 ntBASIC1.45□□□□□ -2.18
Ccdc9Q8VC31 Gm14884-201ENSMUST00000120456 196 ntBASIC1.45□□□□□ -2.18
Ccdc9Q8VC31 Gm24399-201ENSMUST00000157869 74 ntBASIC1.45□□□□□ -2.18
Ccdc9Q8VC31 Gm25949-201ENSMUST00000175333 114 ntBASIC1.45□□□□□ -2.18
Ccdc9Q8VC31 Gm24495-201ENSMUST00000178575 79 ntBASIC1.45□□□□□ -2.18
Ccdc9Q8VC31 Gm22253-201ENSMUST00000179870 79 ntBASIC1.45□□□□□ -2.18
Ccdc9Q8VC31 Mir7665-201ENSMUST00000184907 63 ntBASIC1.45□□□□□ -2.18
Ccdc9Q8VC31 Gm28794-201ENSMUST00000185276 136 ntBASIC1.45□□□□□ -2.18
Ccdc9Q8VC31 Gm26062-201ENSMUST00000083379 107 ntBASIC1.45□□□□□ -2.18
Ccdc9Q8VC31 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.44□□□□□ -2.18
Ccdc9Q8VC31 Mir20b-201ENSMUST00000102087 80 ntBASIC1.44□□□□□ -2.18
Ccdc9Q8VC31 Gm25170-201ENSMUST00000104191 129 ntBASIC1.44□□□□□ -2.18
Ccdc9Q8VC31 Gm25274-201ENSMUST00000104296 135 ntBASIC1.44□□□□□ -2.18
Ccdc9Q8VC31 Gm24509-201ENSMUST00000157086 101 ntBASIC1.44□□□□□ -2.18
Ccdc9Q8VC31 Gm25358-201ENSMUST00000157189 101 ntBASIC1.44□□□□□ -2.18
Ccdc9Q8VC31 Gm23208-201ENSMUST00000158666 127 ntBASIC1.44□□□□□ -2.18
Ccdc9Q8VC31 Gm24223-201ENSMUST00000158827 90 ntBASIC1.44□□□□□ -2.18
Ccdc9Q8VC31 Mir6240-201ENSMUST00000184281 117 ntBASIC1.44□□□□□ -2.18
Ccdc9Q8VC31 Gm27419-201ENSMUST00000184576 109 ntBASIC1.44□□□□□ -2.18
Ccdc9Q8VC31 Gm23376-201ENSMUST00000082938 160 ntBASIC1.44□□□□□ -2.18
Ccdc9Q8VC31 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.44□□□□□ -2.18
Ccdc9Q8VC31 Gm25322-201ENSMUST00000122556 104 ntBASIC1.43□□□□□ -2.18
Ccdc9Q8VC31 Gm22539-201ENSMUST00000158167 117 ntBASIC1.43□□□□□ -2.18
Ccdc9Q8VC31 Gm22164-201ENSMUST00000158413 106 ntBASIC1.43□□□□□ -2.18
Ccdc9Q8VC31 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC1.43□□□□□ -2.18
Ccdc9Q8VC31 Gm24366-201ENSMUST00000175383 86 ntBASIC1.43□□□□□ -2.18
Ccdc9Q8VC31 Gm24020-201ENSMUST00000180156 108 ntBASIC1.43□□□□□ -2.18
Ccdc9Q8VC31 Gm20305-201ENSMUST00000193226 177 ntBASIC1.43□□□□□ -2.18
Ccdc9Q8VC31 Gm43911-201ENSMUST00000203097 76 ntBASIC1.43□□□□□ -2.18
Ccdc9Q8VC31 Gm45197-201ENSMUST00000205288 151 ntBASIC1.43□□□□□ -2.18
Ccdc9Q8VC31 Gm25038-201ENSMUST00000082928 130 ntBASIC1.43□□□□□ -2.18
Ccdc9Q8VC31 Gm24918-201ENSMUST00000083022 130 ntBASIC1.43□□□□□ -2.18
Ccdc9Q8VC31 Mir654-201ENSMUST00000104787 84 ntBASIC1.42□□□□□ -2.18
Ccdc9Q8VC31 Gm23785-201ENSMUST00000116741 96 ntBASIC1.42□□□□□ -2.18
Ccdc9Q8VC31 Mir1191-201ENSMUST00000116883 120 ntBASIC1.42□□□□□ -2.18
Ccdc9Q8VC31 Mir1197-201ENSMUST00000117037 120 ntBASIC1.42□□□□□ -2.18
Ccdc9Q8VC31 Gm24868-201ENSMUST00000157265 136 ntBASIC1.42□□□□□ -2.18
Ccdc9Q8VC31 Gm24077-201ENSMUST00000158183 136 ntBASIC1.42□□□□□ -2.18
Ccdc9Q8VC31 Gm20118-201ENSMUST00000187207 162 ntBASIC1.42□□□□□ -2.18
Ccdc9Q8VC31 Gm28256-201ENSMUST00000188953 139 ntBASIC1.42□□□□□ -2.18
Ccdc9Q8VC31 Gm28559-201ENSMUST00000190532 139 ntBASIC1.42□□□□□ -2.18
Ccdc9Q8VC31 Gm22048-201ENSMUST00000104721 89 ntBASIC1.41□□□□□ -2.18
Ccdc9Q8VC31 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Ccdc9Q8VC31 Gm25014-201ENSMUST00000158401 103 ntBASIC1.41□□□□□ -2.18
Ccdc9Q8VC31 Mir532-201ENSMUST00000093630 96 ntBASIC1.41□□□□□ -2.18
Ccdc9Q8VC31 Gm24342-201ENSMUST00000103907 104 ntBASIC1.4□□□□□ -2.19
Ccdc9Q8VC31 Gm25496-201ENSMUST00000104430 120 ntBASIC1.4□□□□□ -2.19
Ccdc9Q8VC31 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.4□□□□□ -2.19
Ccdc9Q8VC31 Gm24199-201ENSMUST00000157808 136 ntBASIC1.4□□□□□ -2.19
Ccdc9Q8VC31 Mir3968-201ENSMUST00000175355 100 ntBASIC1.4□□□□□ -2.19
Ccdc9Q8VC31 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Ccdc9Q8VC31 AC122769.2-201ENSMUST00000227248 302 ntBASIC1.4□□□□□ -2.19
Ccdc9Q8VC31 Gm23570-201ENSMUST00000083029 104 ntBASIC1.39□□□□□ -2.19
Ccdc9Q8VC31 Gm25683-201ENSMUST00000083940 131 ntBASIC1.39□□□□□ -2.19
Ccdc9Q8VC31 Mir544-201ENSMUST00000103813 78 ntBASIC1.38□□□□□ -2.19
Ccdc9Q8VC31 Gm24288-201ENSMUST00000157630 144 ntBASIC1.38□□□□□ -2.19
Ccdc9Q8VC31 Gm26089-201ENSMUST00000157898 107 ntBASIC1.38□□□□□ -2.19
Ccdc9Q8VC31 Gm26358-201ENSMUST00000158215 97 ntBASIC1.38□□□□□ -2.19
Ccdc9Q8VC31 Gm22200-201ENSMUST00000158614 67 ntBASIC1.38□□□□□ -2.19
Ccdc9Q8VC31 Gm25160-201ENSMUST00000158914 102 ntBASIC1.38□□□□□ -2.19
Ccdc9Q8VC31 Gm27894-201ENSMUST00000184177 92 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 7.2 ms