Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Gm23301-201ENSMUST00000082713 65 ntBASIC0.68□□□□□ -2.3
Mmp28Q8CGV8 Gm26202-201ENSMUST00000082910 65 ntBASIC0.68□□□□□ -2.3
Mmp28Q8CGV8 Gm24524-201ENSMUST00000082925 170 ntBASIC0.68□□□□□ -2.3
Mmp28Q8CGV8 Gm25138-201ENSMUST00000083248 136 ntBASIC0.68□□□□□ -2.3
Mmp28Q8CGV8 Mir196b-201ENSMUST00000083509 85 ntBASIC0.68□□□□□ -2.3
Mmp28Q8CGV8 Gm23254-201ENSMUST00000097244 79 ntBASIC0.68□□□□□ -2.3
Mmp28Q8CGV8 Gm22030-201ENSMUST00000116942 63 ntBASIC0.67□□□□□ -2.3
Mmp28Q8CGV8 Gm23989-201ENSMUST00000117030 66 ntBASIC0.67□□□□□ -2.3
Mmp28Q8CGV8 Gm26369-201ENSMUST00000157825 100 ntBASIC0.67□□□□□ -2.3
Mmp28Q8CGV8 Gm25600-201ENSMUST00000158357 106 ntBASIC0.67□□□□□ -2.3
Mmp28Q8CGV8 Gm25678-201ENSMUST00000174984 73 ntBASIC0.67□□□□□ -2.3
Mmp28Q8CGV8 Mir7052-201ENSMUST00000184821 65 ntBASIC0.67□□□□□ -2.3
Mmp28Q8CGV8 Gm27587-201ENSMUST00000185116 163 ntBASIC0.67□□□□□ -2.3
Mmp28Q8CGV8 mt-Tf-201ENSMUST00000082387 68 ntBASIC0.67□□□□□ -2.3
Mmp28Q8CGV8 Mir101a-201ENSMUST00000083517 83 ntBASIC0.67□□□□□ -2.3
Mmp28Q8CGV8 Gm23482-201ENSMUST00000104172 122 ntBASIC0.66□□□□□ -2.3
Mmp28Q8CGV8 Gm22319-201ENSMUST00000157147 122 ntBASIC0.66□□□□□ -2.3
Mmp28Q8CGV8 Gm22490-201ENSMUST00000157188 119 ntBASIC0.66□□□□□ -2.3
Mmp28Q8CGV8 Gm24678-201ENSMUST00000158756 104 ntBASIC0.66□□□□□ -2.3
Mmp28Q8CGV8 Mir377-201ENSMUST00000083504 68 ntBASIC0.66□□□□□ -2.3
Mmp28Q8CGV8 Snord80-201ENSMUST00000083801 81 ntBASIC0.66□□□□□ -2.3
Mmp28Q8CGV8 Gm25629-201ENSMUST00000084001 107 ntBASIC0.66□□□□□ -2.3
Mmp28Q8CGV8 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.65□□□□□ -2.3
Mmp28Q8CGV8 Gm24290-201ENSMUST00000157634 96 ntBASIC0.65□□□□□ -2.31
Mmp28Q8CGV8 Mir100-201ENSMUST00000175270 80 ntBASIC0.65□□□□□ -2.31
Mmp28Q8CGV8 Mir3968-201ENSMUST00000175355 100 ntBASIC0.65□□□□□ -2.31
Mmp28Q8CGV8 Gm25693-201ENSMUST00000175443 85 ntBASIC0.65□□□□□ -2.31
Mmp28Q8CGV8 Gm23416-201ENSMUST00000175520 95 ntBASIC0.65□□□□□ -2.31
Mmp28Q8CGV8 Mir7663-201ENSMUST00000183950 61 ntBASIC0.65□□□□□ -2.31
Mmp28Q8CGV8 Mir7-1-201ENSMUST00000083500 108 ntBASIC0.65□□□□□ -2.31
Mmp28Q8CGV8 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.65□□□□□ -2.31
Mmp28Q8CGV8 Gm26338-201ENSMUST00000102372 110 ntBASIC0.64□□□□□ -2.31
Mmp28Q8CGV8 Gm23661-201ENSMUST00000122630 87 ntBASIC0.64□□□□□ -2.31
Mmp28Q8CGV8 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.64□□□□□ -2.31
Mmp28Q8CGV8 Gm23065-201ENSMUST00000158236 130 ntBASIC0.64□□□□□ -2.31
Mmp28Q8CGV8 Gm25715-201ENSMUST00000158627 125 ntBASIC0.64□□□□□ -2.31
Mmp28Q8CGV8 Gm25974-201ENSMUST00000158701 94 ntBASIC0.64□□□□□ -2.31
Mmp28Q8CGV8 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.64□□□□□ -2.31
Mmp28Q8CGV8 Gm43977-201ENSMUST00000203970 189 ntBASIC0.64□□□□□ -2.31
Mmp28Q8CGV8 DQ267101-201ENSMUST00000082562 73 ntBASIC0.64□□□□□ -2.31
Mmp28Q8CGV8 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.64□□□□□ -2.31
Mmp28Q8CGV8 Gm23766-201ENSMUST00000103894 80 ntBASIC0.63□□□□□ -2.31
Mmp28Q8CGV8 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
Mmp28Q8CGV8 Gm26421-201ENSMUST00000104279 132 ntBASIC0.62□□□□□ -2.31
Mmp28Q8CGV8 Gm25889-201ENSMUST00000157775 107 ntBASIC0.62□□□□□ -2.31
Mmp28Q8CGV8 Gm22541-201ENSMUST00000158165 127 ntBASIC0.62□□□□□ -2.31
Mmp28Q8CGV8 Gm25976-201ENSMUST00000158695 130 ntBASIC0.62□□□□□ -2.31
Mmp28Q8CGV8 Gm27297-201ENSMUST00000183395 105 ntBASIC0.62□□□□□ -2.31
Mmp28Q8CGV8 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.62□□□□□ -2.31
Mmp28Q8CGV8 Gm14884-201ENSMUST00000120456 196 ntBASIC0.61□□□□□ -2.31
Mmp28Q8CGV8 Gm6985-201ENSMUST00000121255 271 ntBASIC0.61□□□□□ -2.31
Mmp28Q8CGV8 Gm23900-201ENSMUST00000157569 108 ntBASIC0.61□□□□□ -2.31
Mmp28Q8CGV8 Gm24009-201ENSMUST00000157734 93 ntBASIC0.61□□□□□ -2.31
Mmp28Q8CGV8 Gm22503-201ENSMUST00000158983 115 ntBASIC0.61□□□□□ -2.31
Mmp28Q8CGV8 Mir1954-201ENSMUST00000175595 86 ntBASIC0.61□□□□□ -2.31
Mmp28Q8CGV8 Gm25618-201ENSMUST00000179484 107 ntBASIC0.61□□□□□ -2.31
Mmp28Q8CGV8 Mir6342-201ENSMUST00000183870 125 ntBASIC0.61□□□□□ -2.31
Mmp28Q8CGV8 Gm23735-201ENSMUST00000082551 134 ntBASIC0.61□□□□□ -2.31
Mmp28Q8CGV8 Gm25506-201ENSMUST00000104339 70 ntBASIC0.6□□□□□ -2.31
Mmp28Q8CGV8 Gm12432-201ENSMUST00000119540 186 ntBASIC0.6□□□□□ -2.31
Mmp28Q8CGV8 Gm24399-201ENSMUST00000157869 74 ntBASIC0.6□□□□□ -2.31
Mmp28Q8CGV8 Gm25014-201ENSMUST00000158401 103 ntBASIC0.6□□□□□ -2.31
Mmp28Q8CGV8 Gm25300-201ENSMUST00000175284 84 ntBASIC0.6□□□□□ -2.31
Mmp28Q8CGV8 Mir7010-201ENSMUST00000183464 63 ntBASIC0.6□□□□□ -2.31
Mmp28Q8CGV8 Gm28435-201ENSMUST00000185496 108 ntBASIC0.6□□□□□ -2.31
Mmp28Q8CGV8 Gm45197-201ENSMUST00000205288 151 ntBASIC0.6□□□□□ -2.31
Mmp28Q8CGV8 Gm25815-201ENSMUST00000082755 107 ntBASIC0.6□□□□□ -2.31
Mmp28Q8CGV8 Gm26456-201ENSMUST00000082831 111 ntBASIC0.6□□□□□ -2.31
Mmp28Q8CGV8 Gm26062-201ENSMUST00000083379 107 ntBASIC0.6□□□□□ -2.31
Mmp28Q8CGV8 Snord33-201ENSMUST00000083694 84 ntBASIC0.6□□□□□ -2.31
Mmp28Q8CGV8 Mir1949-202ENSMUST00000199259 70 ntBASIC0.59□□□□□ -2.31
Mmp28Q8CGV8 Gm24410-201ENSMUST00000083433 107 ntBASIC0.59□□□□□ -2.31
Mmp28Q8CGV8 Mir216a-201ENSMUST00000083605 72 ntBASIC0.59□□□□□ -2.31
Mmp28Q8CGV8 Gm23344-201ENSMUST00000083818 68 ntBASIC0.59□□□□□ -2.31
Mmp28Q8CGV8 Mir362-201ENSMUST00000093592 65 ntBASIC0.59□□□□□ -2.31
Mmp28Q8CGV8 Mir216b-201ENSMUST00000102363 86 ntBASIC0.58□□□□□ -2.32
Mmp28Q8CGV8 Gm26133-201ENSMUST00000157363 100 ntBASIC0.58□□□□□ -2.32
Mmp28Q8CGV8 Gm22520-201ENSMUST00000158269 129 ntBASIC0.58□□□□□ -2.32
Mmp28Q8CGV8 Gm29535-201ENSMUST00000185723 109 ntBASIC0.58□□□□□ -2.32
Mmp28Q8CGV8 Gm28143-201ENSMUST00000191082 109 ntBASIC0.58□□□□□ -2.32
Mmp28Q8CGV8 Gm25987-201ENSMUST00000083234 107 ntBASIC0.58□□□□□ -2.32
Mmp28Q8CGV8 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.58□□□□□ -2.32
Mmp28Q8CGV8 Gm24234-201ENSMUST00000104316 107 ntBASIC0.57□□□□□ -2.32
Mmp28Q8CGV8 Gm25378-201ENSMUST00000104333 129 ntBASIC0.57□□□□□ -2.32
Mmp28Q8CGV8 Snord71-201ENSMUST00000104361 85 ntBASIC0.57□□□□□ -2.32
Mmp28Q8CGV8 Gm26301-201ENSMUST00000104813 95 ntBASIC0.57□□□□□ -2.32
Mmp28Q8CGV8 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
Mmp28Q8CGV8 Gm27289-201ENSMUST00000183341 82 ntBASIC0.57□□□□□ -2.32
Mmp28Q8CGV8 Gm27656-201ENSMUST00000185055 80 ntBASIC0.57□□□□□ -2.32
Mmp28Q8CGV8 Gm38295-201ENSMUST00000191951 151 ntBASIC0.57□□□□□ -2.32
Mmp28Q8CGV8 Gm44308-201ENSMUST00000197080 99 ntBASIC0.57□□□□□ -2.32
Mmp28Q8CGV8 mt-Tv-201ENSMUST00000082389 69 ntBASIC0.57□□□□□ -2.32
Mmp28Q8CGV8 Gm24208-201ENSMUST00000082783 135 ntBASIC0.57□□□□□ -2.32
Mmp28Q8CGV8 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
Mmp28Q8CGV8 Gm25040-201ENSMUST00000103877 66 ntBASIC0.56□□□□□ -2.32
Mmp28Q8CGV8 Gm23991-201ENSMUST00000117033 93 ntBASIC0.56□□□□□ -2.32
Mmp28Q8CGV8 Mir6905-201ENSMUST00000184228 70 ntBASIC0.56□□□□□ -2.32
Mmp28Q8CGV8 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.56□□□□□ -2.32
Mmp28Q8CGV8 Gm25635-201ENSMUST00000082675 131 ntBASIC0.56□□□□□ -2.32
Mmp28Q8CGV8 Gm23203-201ENSMUST00000104374 107 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 137.5 ms