Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Mir7050-201ENSMUST00000184636 60 ntBASIC2.89□□□□□ -1.95
Trim35Q8C006 Gm24350-202ENSMUST00000198309 132 ntBASIC2.89□□□□□ -1.95
Trim35Q8C006 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.89□□□□□ -1.95
Trim35Q8C006 Mir184-201ENSMUST00000083662 69 ntBASIC2.89□□□□□ -1.95
Trim35Q8C006 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.89□□□□□ -1.95
Trim35Q8C006 Gm23747-201ENSMUST00000104228 131 ntBASIC2.88□□□□□ -1.95
Trim35Q8C006 Gm9009-201ENSMUST00000117321 326 ntBASIC2.88□□□□□ -1.95
Trim35Q8C006 Gm24237-201ENSMUST00000157790 132 ntBASIC2.88□□□□□ -1.95
Trim35Q8C006 Gm27527-201ENSMUST00000183903 99 ntBASIC2.88□□□□□ -1.95
Trim35Q8C006 Gm44903-201ENSMUST00000206840 130 ntBASIC2.88□□□□□ -1.95
Trim35Q8C006 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Trim35Q8C006 Mir709-201ENSMUST00000102190 88 ntBASIC2.87□□□□□ -1.95
Trim35Q8C006 Mir717-201ENSMUST00000102259 109 ntBASIC2.87□□□□□ -1.95
Trim35Q8C006 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Trim35Q8C006 Gm24288-201ENSMUST00000157630 144 ntBASIC2.87□□□□□ -1.95
Trim35Q8C006 Gm26181-201ENSMUST00000157687 106 ntBASIC2.87□□□□□ -1.95
Trim35Q8C006 Gm23114-201ENSMUST00000158478 117 ntBASIC2.87□□□□□ -1.95
Trim35Q8C006 Gm26215-201ENSMUST00000158584 139 ntBASIC2.87□□□□□ -1.95
Trim35Q8C006 Gm44393-201ENSMUST00000197418 138 ntBASIC2.87□□□□□ -1.95
Trim35Q8C006 Gm45125-201ENSMUST00000206908 151 ntBASIC2.87□□□□□ -1.95
Trim35Q8C006 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Trim35Q8C006 Gm22232-201ENSMUST00000104654 94 ntBASIC2.86□□□□□ -1.95
Trim35Q8C006 Gm24651-201ENSMUST00000157107 107 ntBASIC2.86□□□□□ -1.95
Trim35Q8C006 Gm24900-201ENSMUST00000158128 134 ntBASIC2.86□□□□□ -1.95
Trim35Q8C006 Mir6405-201ENSMUST00000184584 124 ntBASIC2.86□□□□□ -1.95
Trim35Q8C006 Mir300-201ENSMUST00000083485 79 ntBASIC2.86□□□□□ -1.95
Trim35Q8C006 Mir151-201ENSMUST00000083678 68 ntBASIC2.86□□□□□ -1.95
Trim35Q8C006 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Trim35Q8C006 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.86□□□□□ -1.95
Trim35Q8C006 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Trim35Q8C006 Gm11414-201ENSMUST00000121795 263 ntBASIC2.85□□□□□ -1.95
Trim35Q8C006 Gm22803-201ENSMUST00000158049 283 ntBASIC2.85□□□□□ -1.95
Trim35Q8C006 Gm25656-201ENSMUST00000158466 66 ntBASIC2.85□□□□□ -1.95
Trim35Q8C006 Gm44211-201ENSMUST00000204867 145 ntBASIC2.85□□□□□ -1.95
Trim35Q8C006 Gm43944-201ENSMUST00000205220 120 ntBASIC2.85□□□□□ -1.95
Trim35Q8C006 Gm25373-201ENSMUST00000158156 115 ntBASIC2.84□□□□□ -1.95
Trim35Q8C006 Gm16399-201ENSMUST00000181423 219 ntBASIC2.84□□□□□ -1.95
Trim35Q8C006 Gm27265-201ENSMUST00000183559 77 ntBASIC2.84□□□□□ -1.95
Trim35Q8C006 Mir6917-201ENSMUST00000184111 61 ntBASIC2.84□□□□□ -1.95
Trim35Q8C006 Mir468-201ENSMUST00000197332 78 ntBASIC2.84□□□□□ -1.95
Trim35Q8C006 Gm26227-201ENSMUST00000082510 101 ntBASIC2.84□□□□□ -1.95
Trim35Q8C006 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
Trim35Q8C006 Mir1949-201ENSMUST00000157434 141 ntBASIC2.83□□□□□ -1.96
Trim35Q8C006 Gm24736-201ENSMUST00000158862 130 ntBASIC2.83□□□□□ -1.96
Trim35Q8C006 Mir3965-201ENSMUST00000175570 69 ntBASIC2.83□□□□□ -1.96
Trim35Q8C006 Gm22260-201ENSMUST00000178643 107 ntBASIC2.83□□□□□ -1.96
Trim35Q8C006 Gm27700-201ENSMUST00000185003 81 ntBASIC2.83□□□□□ -1.96
Trim35Q8C006 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.83□□□□□ -1.96
Trim35Q8C006 Mir8103-201ENSMUST00000183945 107 ntBASIC2.82□□□□□ -1.96
Trim35Q8C006 AC211878.4-201ENSMUST00000220970 262 ntBASIC2.82□□□□□ -1.96
Trim35Q8C006 Gm22249-201ENSMUST00000082485 136 ntBASIC2.82□□□□□ -1.96
Trim35Q8C006 Gm25650-201ENSMUST00000083784 162 ntBASIC2.82□□□□□ -1.96
Trim35Q8C006 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Trim35Q8C006 Gm23048-201ENSMUST00000157237 129 ntBASIC2.81□□□□□ -1.96
Trim35Q8C006 Mir3092-201ENSMUST00000174954 96 ntBASIC2.81□□□□□ -1.96
Trim35Q8C006 Snord87-201ENSMUST00000175437 87 ntBASIC2.81□□□□□ -1.96
Trim35Q8C006 Gm45654-201ENSMUST00000210980 123 ntBASIC2.81□□□□□ -1.96
Trim35Q8C006 Gm22154-201ENSMUST00000083844 131 ntBASIC2.81□□□□□ -1.96
Trim35Q8C006 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC2.81□□□□□ -1.96
Trim35Q8C006 Mir499-201ENSMUST00000102357 79 ntBASIC2.8□□□□□ -1.96
Trim35Q8C006 Gm22858-201ENSMUST00000174972 76 ntBASIC2.8□□□□□ -1.96
Trim35Q8C006 Gm25994-201ENSMUST00000175392 101 ntBASIC2.8□□□□□ -1.96
Trim35Q8C006 Gm23419-201ENSMUST00000175523 84 ntBASIC2.8□□□□□ -1.96
Trim35Q8C006 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.8□□□□□ -1.96
Trim35Q8C006 AC159885.1-201ENSMUST00000222221 199 ntBASIC2.8□□□□□ -1.96
Trim35Q8C006 Gm23708-201ENSMUST00000104367 123 ntBASIC2.79□□□□□ -1.96
Trim35Q8C006 Gm23106-201ENSMUST00000157554 101 ntBASIC2.79□□□□□ -1.96
Trim35Q8C006 Mir6916-201ENSMUST00000184514 63 ntBASIC2.79□□□□□ -1.96
Trim35Q8C006 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.79□□□□□ -1.96
Trim35Q8C006 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.79□□□□□ -1.96
Trim35Q8C006 Gm23325-201ENSMUST00000157422 129 ntBASIC2.78□□□□□ -1.96
Trim35Q8C006 Gm22083-201ENSMUST00000157586 102 ntBASIC2.78□□□□□ -1.96
Trim35Q8C006 Gm22651-201ENSMUST00000157872 94 ntBASIC2.78□□□□□ -1.96
Trim35Q8C006 Gm24958-201ENSMUST00000158009 97 ntBASIC2.78□□□□□ -1.96
Trim35Q8C006 Gm23409-201ENSMUST00000158516 237 ntBASIC2.78□□□□□ -1.96
Trim35Q8C006 Gm25368-201ENSMUST00000158847 131 ntBASIC2.78□□□□□ -1.96
Trim35Q8C006 Gm44526-201ENSMUST00000204664 121 ntBASIC2.78□□□□□ -1.96
Trim35Q8C006 Gm16510-201ENSMUST00000153501 249 ntBASIC2.77□□□□□ -1.97
Trim35Q8C006 Gm22298-201ENSMUST00000082662 133 ntBASIC2.77□□□□□ -1.97
Trim35Q8C006 Gm22652-201ENSMUST00000083207 131 ntBASIC2.77□□□□□ -1.97
Trim35Q8C006 Mir377-201ENSMUST00000083504 68 ntBASIC2.77□□□□□ -1.97
Trim35Q8C006 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Trim35Q8C006 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
Trim35Q8C006 Gm24194-201ENSMUST00000116805 90 ntBASIC2.76□□□□□ -1.97
Trim35Q8C006 DQ267100-201ENSMUST00000122600 72 ntBASIC2.76□□□□□ -1.97
Trim35Q8C006 Gm23172-201ENSMUST00000157160 124 ntBASIC2.76□□□□□ -1.97
Trim35Q8C006 Gm22416-201ENSMUST00000158590 88 ntBASIC2.76□□□□□ -1.97
Trim35Q8C006 Gm25119-201ENSMUST00000158815 88 ntBASIC2.76□□□□□ -1.97
Trim35Q8C006 Mir1961-201ENSMUST00000158643 112 ntBASIC2.75□□□□□ -1.97
Trim35Q8C006 Gm27532-201ENSMUST00000183726 113 ntBASIC2.75□□□□□ -1.97
Trim35Q8C006 Gm27717-201ENSMUST00000183933 151 ntBASIC2.75□□□□□ -1.97
Trim35Q8C006 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.75□□□□□ -1.97
Trim35Q8C006 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.75□□□□□ -1.97
Trim35Q8C006 Gm23470-201ENSMUST00000157129 120 ntBASIC2.74□□□□□ -1.97
Trim35Q8C006 Gm25280-201ENSMUST00000157269 101 ntBASIC2.74□□□□□ -1.97
Trim35Q8C006 Gm25055-201ENSMUST00000157369 76 ntBASIC2.74□□□□□ -1.97
Trim35Q8C006 Snord53-201ENSMUST00000175146 78 ntBASIC2.74□□□□□ -1.97
Trim35Q8C006 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
Trim35Q8C006 Mir1933-201ENSMUST00000158930 88 ntBASIC2.73□□□□□ -1.97
Trim35Q8C006 Gm27263-201ENSMUST00000184760 76 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 289.2 ms