Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm29535-201ENSMUST00000185723 109 ntBASIC1.56□□□□□ -2.16
Ubp1Q811S7 Gm28143-201ENSMUST00000191082 109 ntBASIC1.56□□□□□ -2.16
Ubp1Q811S7 Gm42533-201ENSMUST00000196247 157 ntBASIC1.56□□□□□ -2.16
Ubp1Q811S7 AC116319.1-201ENSMUST00000227765 222 ntBASIC1.56□□□□□ -2.16
Ubp1Q811S7 Gm25635-201ENSMUST00000082675 131 ntBASIC1.56□□□□□ -2.16
Ubp1Q811S7 Snord69-201ENSMUST00000104024 80 ntBASIC1.55□□□□□ -2.16
Ubp1Q811S7 Gm22030-201ENSMUST00000116942 63 ntBASIC1.55□□□□□ -2.16
Ubp1Q811S7 Gm23661-201ENSMUST00000122630 87 ntBASIC1.55□□□□□ -2.16
Ubp1Q811S7 Gm25968-201ENSMUST00000157167 100 ntBASIC1.55□□□□□ -2.16
Ubp1Q811S7 Gm22603-201ENSMUST00000157603 96 ntBASIC1.55□□□□□ -2.16
Ubp1Q811S7 Gm25974-201ENSMUST00000158701 94 ntBASIC1.55□□□□□ -2.16
Ubp1Q811S7 Gm24221-201ENSMUST00000158833 313 ntBASIC1.55□□□□□ -2.16
Ubp1Q811S7 Gm43206-201ENSMUST00000197990 114 ntBASIC1.55□□□□□ -2.16
Ubp1Q811S7 Gm22556-201ENSMUST00000157803 100 ntBASIC1.54□□□□□ -2.16
Ubp1Q811S7 Mir3079-201ENSMUST00000175428 90 ntBASIC1.54□□□□□ -2.16
Ubp1Q811S7 Gm27686-201ENSMUST00000185123 91 ntBASIC1.54□□□□□ -2.16
Ubp1Q811S7 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.54□□□□□ -2.16
Ubp1Q811S7 Gm22454-201ENSMUST00000082583 107 ntBASIC1.54□□□□□ -2.16
Ubp1Q811S7 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Ubp1Q811S7 Gm15115-201ENSMUST00000121145 264 ntBASIC1.53□□□□□ -2.16
Ubp1Q811S7 Gm6272-201ENSMUST00000121256 171 ntBASIC1.53□□□□□ -2.16
Ubp1Q811S7 Gm25056-201ENSMUST00000157372 62 ntBASIC1.53□□□□□ -2.16
Ubp1Q811S7 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.53□□□□□ -2.16
Ubp1Q811S7 Gm23245-201ENSMUST00000083370 135 ntBASIC1.53□□□□□ -2.16
Ubp1Q811S7 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC1.53□□□□□ -2.16
Ubp1Q811S7 Mir320-201ENSMUST00000083594 82 ntBASIC1.53□□□□□ -2.16
Ubp1Q811S7 Mir500-201ENSMUST00000093600 92 ntBASIC1.53□□□□□ -2.16
Ubp1Q811S7 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Ubp1Q811S7 Gm26425-201ENSMUST00000122529 82 ntBASIC1.52□□□□□ -2.17
Ubp1Q811S7 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.52□□□□□ -2.17
Ubp1Q811S7 Gm27265-201ENSMUST00000183559 77 ntBASIC1.52□□□□□ -2.17
Ubp1Q811S7 Mir6351-201ENSMUST00000183826 99 ntBASIC1.52□□□□□ -2.17
Ubp1Q811S7 Gm27898-201ENSMUST00000183987 80 ntBASIC1.52□□□□□ -2.17
Ubp1Q811S7 Gm27248-201ENSMUST00000184004 166 ntBASIC1.52□□□□□ -2.17
Ubp1Q811S7 Gm44962-201ENSMUST00000206460 279 ntBASIC1.52□□□□□ -2.17
Ubp1Q811S7 Gm22354-201ENSMUST00000083919 70 ntBASIC1.52□□□□□ -2.17
Ubp1Q811S7 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.52□□□□□ -2.17
Ubp1Q811S7 Gm45265-201ENSMUST00000210852 2497 ntBASIC1.51□□□□□ -2.17
Ubp1Q811S7 Gm26051-201ENSMUST00000104642 93 ntBASIC1.51□□□□□ -2.17
Ubp1Q811S7 Gm23558-201ENSMUST00000157823 80 ntBASIC1.51□□□□□ -2.17
Ubp1Q811S7 Gm22140-201ENSMUST00000158745 120 ntBASIC1.51□□□□□ -2.17
Ubp1Q811S7 Gm25633-201ENSMUST00000178565 107 ntBASIC1.51□□□□□ -2.17
Ubp1Q811S7 Gm24638-201ENSMUST00000179807 132 ntBASIC1.51□□□□□ -2.17
Ubp1Q811S7 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.51□□□□□ -2.17
Ubp1Q811S7 Gm22805-201ENSMUST00000082739 107 ntBASIC1.51□□□□□ -2.17
Ubp1Q811S7 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Ubp1Q811S7 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Ubp1Q811S7 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
Ubp1Q811S7 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.5□□□□□ -2.17
Ubp1Q811S7 Gm24174-201ENSMUST00000158933 111 ntBASIC1.5□□□□□ -2.17
Ubp1Q811S7 Gm25681-201ENSMUST00000083938 106 ntBASIC1.5□□□□□ -2.17
Ubp1Q811S7 Mir301b-201ENSMUST00000102333 97 ntBASIC1.49□□□□□ -2.17
Ubp1Q811S7 Mup-ps5-201ENSMUST00000118667 99 ntBASIC1.49□□□□□ -2.17
Ubp1Q811S7 Gm24686-201ENSMUST00000157755 93 ntBASIC1.49□□□□□ -2.17
Ubp1Q811S7 Gm23853-201ENSMUST00000158375 104 ntBASIC1.49□□□□□ -2.17
Ubp1Q811S7 Mir3087-201ENSMUST00000199405 56 ntBASIC1.49□□□□□ -2.17
Ubp1Q811S7 Gm20108-201ENSMUST00000219977 153 ntBASIC1.48□□□□□ -2.17
Ubp1Q811S7 Mir101a-201ENSMUST00000083517 83 ntBASIC1.48□□□□□ -2.17
Ubp1Q811S7 Gm25112-201ENSMUST00000122680 104 ntBASIC1.47□□□□□ -2.17
Ubp1Q811S7 Snord13-201ENSMUST00000157627 104 ntBASIC1.47□□□□□ -2.17
Ubp1Q811S7 Gm25831-201ENSMUST00000158924 163 ntBASIC1.47□□□□□ -2.17
Ubp1Q811S7 Gm23267-201ENSMUST00000178490 132 ntBASIC1.47□□□□□ -2.17
Ubp1Q811S7 Gm27711-201ENSMUST00000183802 118 ntBASIC1.47□□□□□ -2.17
Ubp1Q811S7 Gm24208-201ENSMUST00000082783 135 ntBASIC1.47□□□□□ -2.17
Ubp1Q811S7 Mir410-201ENSMUST00000083563 81 ntBASIC1.47□□□□□ -2.17
Ubp1Q811S7 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Ubp1Q811S7 Gm22788-201ENSMUST00000157876 61 ntBASIC1.46□□□□□ -2.18
Ubp1Q811S7 Mir100-201ENSMUST00000175270 80 ntBASIC1.46□□□□□ -2.18
Ubp1Q811S7 Mir29a-201ENSMUST00000083676 88 ntBASIC1.46□□□□□ -2.18
Ubp1Q811S7 Gm11857-201ENSMUST00000119817 324 ntBASIC1.45□□□□□ -2.18
Ubp1Q811S7 Gm23714-201ENSMUST00000179259 105 ntBASIC1.45□□□□□ -2.18
Ubp1Q811S7 Gm25832-201ENSMUST00000104140 130 ntBASIC1.44□□□□□ -2.18
Ubp1Q811S7 Gm25416-201ENSMUST00000104221 107 ntBASIC1.44□□□□□ -2.18
Ubp1Q811S7 Gm22677-201ENSMUST00000116977 108 ntBASIC1.44□□□□□ -2.18
Ubp1Q811S7 Gm26478-201ENSMUST00000122611 133 ntBASIC1.44□□□□□ -2.18
Ubp1Q811S7 Gm23817-201ENSMUST00000158449 104 ntBASIC1.44□□□□□ -2.18
Ubp1Q811S7 Mir376b-201ENSMUST00000195930 82 ntBASIC1.44□□□□□ -2.18
Ubp1Q811S7 AC157602.1-201ENSMUST00000197446 105 ntBASIC1.44□□□□□ -2.18
Ubp1Q811S7 Gm25820-201ENSMUST00000198589 127 ntBASIC1.44□□□□□ -2.18
Ubp1Q811S7 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
Ubp1Q811S7 Gm26441-201ENSMUST00000082590 104 ntBASIC1.44□□□□□ -2.18
Ubp1Q811S7 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.43□□□□□ -2.18
Ubp1Q811S7 Gm22663-201ENSMUST00000158721 102 ntBASIC1.43□□□□□ -2.18
Ubp1Q811S7 Mir15a-201ENSMUST00000175266 84 ntBASIC1.43□□□□□ -2.18
Ubp1Q811S7 Gm27639-201ENSMUST00000184937 85 ntBASIC1.43□□□□□ -2.18
Ubp1Q811S7 Mir377-201ENSMUST00000083504 68 ntBASIC1.43□□□□□ -2.18
Ubp1Q811S7 Gm23122-201ENSMUST00000157645 103 ntBASIC1.42□□□□□ -2.18
Ubp1Q811S7 Gm24902-201ENSMUST00000158126 123 ntBASIC1.42□□□□□ -2.18
Ubp1Q811S7 Gm25229-201ENSMUST00000178587 79 ntBASIC1.42□□□□□ -2.18
Ubp1Q811S7 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.42□□□□□ -2.18
Ubp1Q811S7 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Ubp1Q811S7 Mir509-201ENSMUST00000196089 75 ntBASIC1.41□□□□□ -2.18
Ubp1Q811S7 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1.4□□□□□ -2.19
Ubp1Q811S7 Gm23989-201ENSMUST00000117030 66 ntBASIC1.4□□□□□ -2.19
Ubp1Q811S7 Gm24895-201ENSMUST00000122742 74 ntBASIC1.4□□□□□ -2.19
Ubp1Q811S7 Gm24076-201ENSMUST00000158179 94 ntBASIC1.4□□□□□ -2.19
Ubp1Q811S7 Gm23967-201ENSMUST00000175062 78 ntBASIC1.4□□□□□ -2.19
Ubp1Q811S7 Gm44483-201ENSMUST00000197203 97 ntBASIC1.4□□□□□ -2.19
Ubp1Q811S7 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
Ubp1Q811S7 Mir216b-201ENSMUST00000102363 86 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 363.3 ms