Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm25014-201ENSMUST00000158401 103 ntBASIC1.68□□□□□ -2.14
Trim28Q62318 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Trim28Q62318 Gm23570-201ENSMUST00000083029 104 ntBASIC1.68□□□□□ -2.14
Trim28Q62318 Gm24252-201ENSMUST00000083700 132 ntBASIC1.68□□□□□ -2.14
Trim28Q62318 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Trim28Q62318 Mir1191-201ENSMUST00000116883 120 ntBASIC1.67□□□□□ -2.14
Trim28Q62318 Gm14039-201ENSMUST00000118705 101 ntBASIC1.67□□□□□ -2.14
Trim28Q62318 Gm22603-201ENSMUST00000157603 96 ntBASIC1.67□□□□□ -2.14
Trim28Q62318 Gm24686-201ENSMUST00000157755 93 ntBASIC1.67□□□□□ -2.14
Trim28Q62318 Gm26358-201ENSMUST00000158215 97 ntBASIC1.67□□□□□ -2.14
Trim28Q62318 Gm26029-201ENSMUST00000158659 132 ntBASIC1.67□□□□□ -2.14
Trim28Q62318 Gm25160-201ENSMUST00000158914 102 ntBASIC1.67□□□□□ -2.14
Trim28Q62318 Snora24-201ENSMUST00000174989 130 ntBASIC1.67□□□□□ -2.14
Trim28Q62318 Gm24495-201ENSMUST00000178575 79 ntBASIC1.67□□□□□ -2.14
Trim28Q62318 Gm22253-201ENSMUST00000179870 79 ntBASIC1.67□□□□□ -2.14
Trim28Q62318 Gm26712-201ENSMUST00000180813 217 ntBASIC1.67□□□□□ -2.14
Trim28Q62318 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC1.67□□□□□ -2.14
Trim28Q62318 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC1.67□□□□□ -2.14
Trim28Q62318 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC1.67□□□□□ -2.14
Trim28Q62318 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC1.67□□□□□ -2.14
Trim28Q62318 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC1.67□□□□□ -2.14
Trim28Q62318 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC1.67□□□□□ -2.14
Trim28Q62318 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC1.67□□□□□ -2.14
Trim28Q62318 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC1.67□□□□□ -2.14
Trim28Q62318 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC1.67□□□□□ -2.14
Trim28Q62318 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC1.67□□□□□ -2.14
Trim28Q62318 Gm24229-201ENSMUST00000158830 118 ntBASIC1.66□□□□□ -2.14
Trim28Q62318 AC158598.2-201ENSMUST00000213397 3832 ntBASIC1.66□□□□□ -2.14
Trim28Q62318 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.14
Trim28Q62318 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.65□□□□□ -2.14
Trim28Q62318 Gm22544-201ENSMUST00000104349 127 ntBASIC1.65□□□□□ -2.15
Trim28Q62318 Gm23203-201ENSMUST00000104374 107 ntBASIC1.65□□□□□ -2.15
Trim28Q62318 Gm11694-201ENSMUST00000118637 159 ntBASIC1.65□□□□□ -2.15
Trim28Q62318 Gm25964-201ENSMUST00000157171 97 ntBASIC1.65□□□□□ -2.15
Trim28Q62318 Gm24868-201ENSMUST00000157265 136 ntBASIC1.65□□□□□ -2.15
Trim28Q62318 Gm24077-201ENSMUST00000158183 136 ntBASIC1.65□□□□□ -2.15
Trim28Q62318 Gm26062-201ENSMUST00000083379 107 ntBASIC1.65□□□□□ -2.15
Trim28Q62318 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Trim28Q62318 Gm22780-201ENSMUST00000104084 132 ntBASIC1.63□□□□□ -2.15
Trim28Q62318 Mir1899-201ENSMUST00000122798 96 ntBASIC1.63□□□□□ -2.15
Trim28Q62318 Gm22539-201ENSMUST00000158167 117 ntBASIC1.63□□□□□ -2.15
Trim28Q62318 Gm22200-201ENSMUST00000158614 67 ntBASIC1.63□□□□□ -2.15
Trim28Q62318 Gm23636-201ENSMUST00000175070 95 ntBASIC1.63□□□□□ -2.15
Trim28Q62318 Mir6962-201ENSMUST00000199512 63 ntBASIC1.63□□□□□ -2.15
Trim28Q62318 AC158537.2-201ENSMUST00000223575 150 ntBASIC1.63□□□□□ -2.15
Trim28Q62318 Gm25901-201ENSMUST00000158494 130 ntBASIC1.62□□□□□ -2.15
Trim28Q62318 Gm24677-201ENSMUST00000158755 150 ntBASIC1.62□□□□□ -2.15
Trim28Q62318 Gm22802-201ENSMUST00000175621 89 ntBASIC1.62□□□□□ -2.15
Trim28Q62318 Gm27265-201ENSMUST00000183559 77 ntBASIC1.62□□□□□ -2.15
Trim28Q62318 Gm38295-201ENSMUST00000191951 151 ntBASIC1.62□□□□□ -2.15
Trim28Q62318 Gm24588-201ENSMUST00000116696 83 ntBASIC1.61□□□□□ -2.15
Trim28Q62318 Gm23900-201ENSMUST00000157569 108 ntBASIC1.61□□□□□ -2.15
Trim28Q62318 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC1.61□□□□□ -2.15
Trim28Q62318 Mir5104-201ENSMUST00000175319 94 ntBASIC1.61□□□□□ -2.15
Trim28Q62318 Gm23306-201ENSMUST00000179058 105 ntBASIC1.61□□□□□ -2.15
Trim28Q62318 Gm24918-201ENSMUST00000083022 130 ntBASIC1.61□□□□□ -2.15
Trim28Q62318 Gm25936-201ENSMUST00000179952 114 ntBASIC1.6□□□□□ -2.15
Trim28Q62318 AC122769.2-201ENSMUST00000227248 302 ntBASIC1.6□□□□□ -2.15
Trim28Q62318 Gm25038-201ENSMUST00000082928 130 ntBASIC1.6□□□□□ -2.15
Trim28Q62318 Gm11966-201ENSMUST00000119907 87 ntBASIC1.59□□□□□ -2.15
Trim28Q62318 Gm26485-201ENSMUST00000158019 64 ntBASIC1.59□□□□□ -2.15
Trim28Q62318 Gm25838-201ENSMUST00000158920 120 ntBASIC1.59□□□□□ -2.15
Trim28Q62318 Gm22403-201ENSMUST00000174919 84 ntBASIC1.59□□□□□ -2.15
Trim28Q62318 Gm20118-201ENSMUST00000187207 162 ntBASIC1.59□□□□□ -2.15
Trim28Q62318 AC157602.1-201ENSMUST00000197446 105 ntBASIC1.59□□□□□ -2.15
Trim28Q62318 Gm26207-201ENSMUST00000082909 104 ntBASIC1.59□□□□□ -2.15
Trim28Q62318 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
Trim28Q62318 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.58□□□□□ -2.16
Trim28Q62318 Gm24154-201ENSMUST00000175261 130 ntBASIC1.58□□□□□ -2.16
Trim28Q62318 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC1.58□□□□□ -2.16
Trim28Q62318 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.58□□□□□ -2.16
Trim28Q62318 Gm26082-201ENSMUST00000104070 127 ntBASIC1.57□□□□□ -2.16
Trim28Q62318 Gm24915-201ENSMUST00000157288 78 ntBASIC1.57□□□□□ -2.16
Trim28Q62318 Gm43927-201ENSMUST00000204599 117 ntBASIC1.57□□□□□ -2.16
Trim28Q62318 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
Trim28Q62318 Mir1197-201ENSMUST00000117037 120 ntBASIC1.56□□□□□ -2.16
Trim28Q62318 Gm23661-201ENSMUST00000122630 87 ntBASIC1.56□□□□□ -2.16
Trim28Q62318 Mir3968-201ENSMUST00000175355 100 ntBASIC1.56□□□□□ -2.16
Trim28Q62318 Gm26499-201ENSMUST00000178544 79 ntBASIC1.56□□□□□ -2.16
Trim28Q62318 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.56□□□□□ -2.16
Trim28Q62318 Gm26096-201ENSMUST00000179084 79 ntBASIC1.56□□□□□ -2.16
Trim28Q62318 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.56□□□□□ -2.16
Trim28Q62318 Gm25705-201ENSMUST00000083119 104 ntBASIC1.56□□□□□ -2.16
Trim28Q62318 Mir29a-201ENSMUST00000083676 88 ntBASIC1.56□□□□□ -2.16
Trim28Q62318 Gm25992-201ENSMUST00000102437 109 ntBASIC1.55□□□□□ -2.16
Trim28Q62318 Gm26133-201ENSMUST00000157363 100 ntBASIC1.55□□□□□ -2.16
Trim28Q62318 Gm23726-201ENSMUST00000178937 67 ntBASIC1.55□□□□□ -2.16
Trim28Q62318 Mir509-201ENSMUST00000196089 75 ntBASIC1.55□□□□□ -2.16
Trim28Q62318 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Trim28Q62318 Gm25759-201ENSMUST00000103988 129 ntBASIC1.54□□□□□ -2.16
Trim28Q62318 Gm23881-201ENSMUST00000116872 66 ntBASIC1.54□□□□□ -2.16
Trim28Q62318 Gm22887-201ENSMUST00000178586 107 ntBASIC1.54□□□□□ -2.16
Trim28Q62318 Mir196b-201ENSMUST00000083509 85 ntBASIC1.54□□□□□ -2.16
Trim28Q62318 Gm26038-201ENSMUST00000158151 106 ntBASIC1.53□□□□□ -2.16
Trim28Q62318 Mir7675-201ENSMUST00000184262 58 ntBASIC1.53□□□□□ -2.16
Trim28Q62318 Mir7059-201ENSMUST00000184825 59 ntBASIC1.53□□□□□ -2.16
Trim28Q62318 Gm28862-201ENSMUST00000188246 163 ntBASIC1.53□□□□□ -2.16
Trim28Q62318 Gm28767-201ENSMUST00000188601 114 ntBASIC1.53□□□□□ -2.16
Trim28Q62318 Mup-ps5-201ENSMUST00000118667 99 ntBASIC1.52□□□□□ -2.17
Trim28Q62318 Gm22485-201ENSMUST00000157990 109 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 156.9 ms