Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm25787-201ENSMUST00000104709 92 ntBASIC0.23□□□□□ -2.37
Ctr9Q62018 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.23□□□□□ -2.37
Ctr9Q62018 Gm24009-201ENSMUST00000157734 93 ntBASIC0.23□□□□□ -2.37
Ctr9Q62018 AC124687.1-201ENSMUST00000221868 189 ntBASIC0.23□□□□□ -2.37
Ctr9Q62018 Gm22303-201ENSMUST00000082686 122 ntBASIC0.23□□□□□ -2.37
Ctr9Q62018 Scarna8-201ENSMUST00000158333 131 ntBASIC0.22□□□□□ -2.37
Ctr9Q62018 Gm17528-201ENSMUST00000171026 239 ntBASIC0.22□□□□□ -2.37
Ctr9Q62018 Mir6896-201ENSMUST00000198033 73 ntBASIC0.22□□□□□ -2.37
Ctr9Q62018 AC165138.1-201ENSMUST00000226984 270 ntBASIC0.22□□□□□ -2.37
Ctr9Q62018 Gm24524-201ENSMUST00000082925 170 ntBASIC0.22□□□□□ -2.37
Ctr9Q62018 Gm22652-201ENSMUST00000083207 131 ntBASIC0.22□□□□□ -2.37
Ctr9Q62018 Mir466b-3-201ENSMUST00000103806 81 ntBASIC0.21□□□□□ -2.38
Ctr9Q62018 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC0.21□□□□□ -2.38
Ctr9Q62018 Gm22089-201ENSMUST00000158336 102 ntBASIC0.21□□□□□ -2.38
Ctr9Q62018 Gm22708-201ENSMUST00000158987 103 ntBASIC0.21□□□□□ -2.38
Ctr9Q62018 Gm25071-201ENSMUST00000175232 70 ntBASIC0.21□□□□□ -2.38
Ctr9Q62018 Mir1a-1-201ENSMUST00000093635 77 ntBASIC0.21□□□□□ -2.38
Ctr9Q62018 Gm22772-201ENSMUST00000104451 121 ntBASIC0.2□□□□□ -2.38
Ctr9Q62018 Gm24833-201ENSMUST00000116775 120 ntBASIC0.2□□□□□ -2.38
Ctr9Q62018 Gm24649-201ENSMUST00000157106 134 ntBASIC0.2□□□□□ -2.38
Ctr9Q62018 AC164561.1-201ENSMUST00000220414 115 ntBASIC0.2□□□□□ -2.38
Ctr9Q62018 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
Ctr9Q62018 Gm23708-201ENSMUST00000104367 123 ntBASIC0.19□□□□□ -2.38
Ctr9Q62018 Gm24555-201ENSMUST00000104548 124 ntBASIC0.19□□□□□ -2.38
Ctr9Q62018 Mir3108-201ENSMUST00000175500 79 ntBASIC0.19□□□□□ -2.38
Ctr9Q62018 Gm26337-201ENSMUST00000178000 79 ntBASIC0.19□□□□□ -2.38
Ctr9Q62018 Mir6365-201ENSMUST00000183990 101 ntBASIC0.19□□□□□ -2.38
Ctr9Q62018 Gm23140-201ENSMUST00000082487 107 ntBASIC0.19□□□□□ -2.38
Ctr9Q62018 Mir802-201ENSMUST00000103258 97 ntBASIC0.18□□□□□ -2.38
Ctr9Q62018 Gm25623-201ENSMUST00000157216 108 ntBASIC0.18□□□□□ -2.38
Ctr9Q62018 Gm23351-201ENSMUST00000158427 125 ntBASIC0.18□□□□□ -2.38
Ctr9Q62018 Gm24772-201ENSMUST00000158507 110 ntBASIC0.18□□□□□ -2.38
Ctr9Q62018 Gm38295-201ENSMUST00000191951 151 ntBASIC0.18□□□□□ -2.38
Ctr9Q62018 Gm2077-201ENSMUST00000195017 319 ntBASIC0.18□□□□□ -2.38
Ctr9Q62018 Gm43927-201ENSMUST00000204599 117 ntBASIC0.18□□□□□ -2.38
Ctr9Q62018 Gm22788-201ENSMUST00000157876 61 ntBASIC0.17□□□□□ -2.38
Ctr9Q62018 Gm23821-201ENSMUST00000158738 106 ntBASIC0.17□□□□□ -2.38
Ctr9Q62018 Gm23922-201ENSMUST00000178792 79 ntBASIC0.17□□□□□ -2.38
Ctr9Q62018 Gm24657-201ENSMUST00000180085 79 ntBASIC0.17□□□□□ -2.38
Ctr9Q62018 Gm22996-201ENSMUST00000180236 79 ntBASIC0.17□□□□□ -2.38
Ctr9Q62018 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
Ctr9Q62018 Gm23239-201ENSMUST00000083006 181 ntBASIC0.17□□□□□ -2.38
Ctr9Q62018 Gm25056-201ENSMUST00000157372 62 ntBASIC0.16□□□□□ -2.38
Ctr9Q62018 Gm24842-201ENSMUST00000158681 54 ntBASIC0.16□□□□□ -2.38
Ctr9Q62018 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC0.16□□□□□ -2.38
Ctr9Q62018 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC0.16□□□□□ -2.38
Ctr9Q62018 Gm23651-201ENSMUST00000116755 120 ntBASIC0.15□□□□□ -2.39
Ctr9Q62018 Gm23601-201ENSMUST00000157259 131 ntBASIC0.15□□□□□ -2.39
Ctr9Q62018 Gm26291-201ENSMUST00000158889 137 ntBASIC0.15□□□□□ -2.39
Ctr9Q62018 Mir3473d-201ENSMUST00000175346 81 ntBASIC0.15□□□□□ -2.39
Ctr9Q62018 Gm28001-201ENSMUST00000183561 117 ntBASIC0.15□□□□□ -2.39
Ctr9Q62018 Gm27980-201ENSMUST00000184094 169 ntBASIC0.15□□□□□ -2.39
Ctr9Q62018 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.15□□□□□ -2.39
Ctr9Q62018 Snord64-201ENSMUST00000104003 67 ntBASIC0.14□□□□□ -2.39
Ctr9Q62018 Gm26369-201ENSMUST00000157825 100 ntBASIC0.14□□□□□ -2.39
Ctr9Q62018 Gm24399-201ENSMUST00000157869 74 ntBASIC0.14□□□□□ -2.39
Ctr9Q62018 Gm24073-201ENSMUST00000158177 106 ntBASIC0.14□□□□□ -2.39
Ctr9Q62018 Gm26498-201ENSMUST00000177799 79 ntBASIC0.14□□□□□ -2.39
Ctr9Q62018 Gm26230-201ENSMUST00000180141 79 ntBASIC0.14□□□□□ -2.39
Ctr9Q62018 Gm44327-201ENSMUST00000200068 117 ntBASIC0.14□□□□□ -2.39
Ctr9Q62018 Gm45197-201ENSMUST00000205288 151 ntBASIC0.14□□□□□ -2.39
Ctr9Q62018 Gm44859-201ENSMUST00000207831 94 ntBASIC0.14□□□□□ -2.39
Ctr9Q62018 Gm23900-201ENSMUST00000157569 108 ntBASIC0.13□□□□□ -2.39
Ctr9Q62018 Gm23065-201ENSMUST00000158236 130 ntBASIC0.13□□□□□ -2.39
Ctr9Q62018 Gm22638-201ENSMUST00000179674 107 ntBASIC0.13□□□□□ -2.39
Ctr9Q62018 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.13□□□□□ -2.39
Ctr9Q62018 mt-Tc-201ENSMUST00000082400 66 ntBASIC0.13□□□□□ -2.39
Ctr9Q62018 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
Ctr9Q62018 Snord78-201ENSMUST00000104032 66 ntBASIC0.12□□□□□ -2.39
Ctr9Q62018 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.12□□□□□ -2.39
Ctr9Q62018 Gm22196-201ENSMUST00000116865 109 ntBASIC0.12□□□□□ -2.39
Ctr9Q62018 Gm24001-201ENSMUST00000158463 85 ntBASIC0.12□□□□□ -2.39
Ctr9Q62018 Gm25952-201ENSMUST00000175329 74 ntBASIC0.12□□□□□ -2.39
Ctr9Q62018 Gm27851-201ENSMUST00000183529 63 ntBASIC0.12□□□□□ -2.39
Ctr9Q62018 Gm23507-201ENSMUST00000083078 107 ntBASIC0.12□□□□□ -2.39
Ctr9Q62018 Gm23654-201ENSMUST00000116758 126 ntBASIC0.11□□□□□ -2.39
Ctr9Q62018 Gm23986-201ENSMUST00000157144 63 ntBASIC0.11□□□□□ -2.39
Ctr9Q62018 Gm26133-201ENSMUST00000157363 100 ntBASIC0.11□□□□□ -2.39
Ctr9Q62018 Gm25247-201ENSMUST00000175475 90 ntBASIC0.11□□□□□ -2.39
Ctr9Q62018 Mir8107-201ENSMUST00000184024 117 ntBASIC0.11□□□□□ -2.39
Ctr9Q62018 Gm42845-201ENSMUST00000197766 105 ntBASIC0.11□□□□□ -2.39
Ctr9Q62018 Snord95-201ENSMUST00000082846 68 ntBASIC0.11□□□□□ -2.39
Ctr9Q62018 Gm25006-201ENSMUST00000083813 107 ntBASIC0.11□□□□□ -2.39
Ctr9Q62018 Gm10351-201ENSMUST00000087694 125 ntBASIC0.11□□□□□ -2.39
Ctr9Q62018 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC0.1□□□□□ -2.39
Ctr9Q62018 Gm38298-201ENSMUST00000193578 118 ntBASIC0.1□□□□□ -2.39
Ctr9Q62018 Gm44803-201ENSMUST00000204384 156 ntBASIC0.1□□□□□ -2.39
Ctr9Q62018 Gm22981-201ENSMUST00000082611 75 ntBASIC0.1□□□□□ -2.39
Ctr9Q62018 Gm25635-201ENSMUST00000082675 131 ntBASIC0.1□□□□□ -2.39
Ctr9Q62018 Snord80-201ENSMUST00000083801 81 ntBASIC0.1□□□□□ -2.39
Ctr9Q62018 Gm24686-201ENSMUST00000157755 93 ntBASIC0.09□□□□□ -2.4
Ctr9Q62018 Gm25370-201ENSMUST00000158159 94 ntBASIC0.09□□□□□ -2.4
Ctr9Q62018 Gm25014-201ENSMUST00000158401 103 ntBASIC0.09□□□□□ -2.4
Ctr9Q62018 Gm22297-201ENSMUST00000083312 106 ntBASIC0.09□□□□□ -2.4
Ctr9Q62018 Mir18-201ENSMUST00000083469 96 ntBASIC0.09□□□□□ -2.4
Ctr9Q62018 Gm22336-201ENSMUST00000157719 107 ntBASIC0.08□□□□□ -2.4
Ctr9Q62018 Gm22088-201ENSMUST00000158341 117 ntBASIC0.08□□□□□ -2.4
Ctr9Q62018 Gm23761-201ENSMUST00000158347 104 ntBASIC0.08□□□□□ -2.4
Ctr9Q62018 Mir3967-201ENSMUST00000198710 68 ntBASIC0.08□□□□□ -2.4
Ctr9Q62018 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 242.2 ms