Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 AC147560.1-201ENSMUST00000197528 107 ntBASIC2.01□□□□□ -2.09
Scaf1Q5U4C3 Gm24311-201ENSMUST00000082570 104 ntBASIC2.01□□□□□ -2.09
Scaf1Q5U4C3 Gm23038-201ENSMUST00000083873 104 ntBASIC2.01□□□□□ -2.09
Scaf1Q5U4C3 Gm25495-201ENSMUST00000104431 131 ntBASIC2□□□□□ -2.09
Scaf1Q5U4C3 Gm23857-201ENSMUST00000158379 111 ntBASIC2□□□□□ -2.09
Scaf1Q5U4C3 Gm27493-201ENSMUST00000184128 78 ntBASIC2□□□□□ -2.09
Scaf1Q5U4C3 Gm14400-201ENSMUST00000117234 2135 ntBASIC1.99□□□□□ -2.09
Scaf1Q5U4C3 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.99□□□□□ -2.09
Scaf1Q5U4C3 Gm24406-201ENSMUST00000083026 128 ntBASIC1.99□□□□□ -2.09
Scaf1Q5U4C3 Gm26089-201ENSMUST00000157898 107 ntBASIC1.98□□□□□ -2.09
Scaf1Q5U4C3 Gm25166-201ENSMUST00000158909 111 ntBASIC1.98□□□□□ -2.09
Scaf1Q5U4C3 Gm27265-201ENSMUST00000183559 77 ntBASIC1.98□□□□□ -2.09
Scaf1Q5U4C3 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC1.98□□□□□ -2.09
Scaf1Q5U4C3 Gm24221-201ENSMUST00000158833 313 ntBASIC1.97□□□□□ -2.09
Scaf1Q5U4C3 Gm27419-201ENSMUST00000184576 109 ntBASIC1.97□□□□□ -2.09
Scaf1Q5U4C3 Mir7665-201ENSMUST00000184907 63 ntBASIC1.97□□□□□ -2.09
Scaf1Q5U4C3 Gm26202-201ENSMUST00000082910 65 ntBASIC1.97□□□□□ -2.09
Scaf1Q5U4C3 Gm23790-201ENSMUST00000083013 107 ntBASIC1.97□□□□□ -2.09
Scaf1Q5U4C3 Gm23245-201ENSMUST00000083370 135 ntBASIC1.97□□□□□ -2.09
Scaf1Q5U4C3 Gm15115-201ENSMUST00000121145 264 ntBASIC1.96□□□□□ -2.1
Scaf1Q5U4C3 Gm23349-201ENSMUST00000158432 98 ntBASIC1.96□□□□□ -2.1
Scaf1Q5U4C3 Gm24549-201ENSMUST00000158647 139 ntBASIC1.96□□□□□ -2.1
Scaf1Q5U4C3 Gm27297-201ENSMUST00000183395 105 ntBASIC1.96□□□□□ -2.1
Scaf1Q5U4C3 Gm44602-201ENSMUST00000205948 132 ntBASIC1.96□□□□□ -2.1
Scaf1Q5U4C3 Gm23817-201ENSMUST00000158449 104 ntBASIC1.95□□□□□ -2.1
Scaf1Q5U4C3 Mir6351-201ENSMUST00000183826 99 ntBASIC1.95□□□□□ -2.1
Scaf1Q5U4C3 Gm42533-201ENSMUST00000196247 157 ntBASIC1.95□□□□□ -2.1
Scaf1Q5U4C3 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.95□□□□□ -2.1
Scaf1Q5U4C3 Gm25899-201ENSMUST00000082672 141 ntBASIC1.95□□□□□ -2.1
Scaf1Q5U4C3 Gm22950-201ENSMUST00000082776 107 ntBASIC1.95□□□□□ -2.1
Scaf1Q5U4C3 Gm26104-201ENSMUST00000157250 108 ntBASIC1.94□□□□□ -2.1
Scaf1Q5U4C3 Gm23221-201ENSMUST00000158118 93 ntBASIC1.94□□□□□ -2.1
Scaf1Q5U4C3 Gm22770-201ENSMUST00000158368 67 ntBASIC1.94□□□□□ -2.1
Scaf1Q5U4C3 Gm23369-201ENSMUST00000175406 105 ntBASIC1.94□□□□□ -2.1
Scaf1Q5U4C3 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Scaf1Q5U4C3 Gm22672-201ENSMUST00000104414 134 ntBASIC1.93□□□□□ -2.1
Scaf1Q5U4C3 Gm25968-201ENSMUST00000157167 100 ntBASIC1.93□□□□□ -2.1
Scaf1Q5U4C3 Gm25600-201ENSMUST00000158357 106 ntBASIC1.93□□□□□ -2.1
Scaf1Q5U4C3 Mir3079-201ENSMUST00000175428 90 ntBASIC1.93□□□□□ -2.1
Scaf1Q5U4C3 Gm25449-201ENSMUST00000179389 79 ntBASIC1.93□□□□□ -2.1
Scaf1Q5U4C3 Gm23410-201ENSMUST00000179967 107 ntBASIC1.93□□□□□ -2.1
Scaf1Q5U4C3 Gm45197-201ENSMUST00000205288 151 ntBASIC1.93□□□□□ -2.1
Scaf1Q5U4C3 AC116319.1-201ENSMUST00000227765 222 ntBASIC1.93□□□□□ -2.1
Scaf1Q5U4C3 Gm22505-201ENSMUST00000082956 108 ntBASIC1.93□□□□□ -2.1
Scaf1Q5U4C3 Gm22363-201ENSMUST00000083100 108 ntBASIC1.93□□□□□ -2.1
Scaf1Q5U4C3 Gm23814-201ENSMUST00000083230 102 ntBASIC1.93□□□□□ -2.1
Scaf1Q5U4C3 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Scaf1Q5U4C3 Snord69-201ENSMUST00000104024 80 ntBASIC1.92□□□□□ -2.1
Scaf1Q5U4C3 Gm23482-201ENSMUST00000104172 122 ntBASIC1.92□□□□□ -2.1
Scaf1Q5U4C3 Gm24399-201ENSMUST00000157869 74 ntBASIC1.92□□□□□ -2.1
Scaf1Q5U4C3 Gm24252-201ENSMUST00000083700 132 ntBASIC1.92□□□□□ -2.1
Scaf1Q5U4C3 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.92□□□□□ -2.1
Scaf1Q5U4C3 Gm24290-201ENSMUST00000157634 96 ntBASIC1.91□□□□□ -2.1
Scaf1Q5U4C3 Gm25693-201ENSMUST00000175443 85 ntBASIC1.91□□□□□ -2.1
Scaf1Q5U4C3 Mir448-201ENSMUST00000083516 112 ntBASIC1.91□□□□□ -2.1
Scaf1Q5U4C3 Mir200b-201ENSMUST00000083615 70 ntBASIC1.91□□□□□ -2.1
Scaf1Q5U4C3 Mir500-201ENSMUST00000093600 92 ntBASIC1.91□□□□□ -2.1
Scaf1Q5U4C3 Gm22544-201ENSMUST00000104349 127 ntBASIC1.9□□□□□ -2.11
Scaf1Q5U4C3 Gm25496-201ENSMUST00000104430 120 ntBASIC1.9□□□□□ -2.11
Scaf1Q5U4C3 Gm23917-201ENSMUST00000175256 98 ntBASIC1.9□□□□□ -2.11
Scaf1Q5U4C3 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Scaf1Q5U4C3 Gm26082-201ENSMUST00000104070 127 ntBASIC1.89□□□□□ -2.11
Scaf1Q5U4C3 Gm22673-201ENSMUST00000104415 131 ntBASIC1.89□□□□□ -2.11
Scaf1Q5U4C3 Gm22030-201ENSMUST00000116942 63 ntBASIC1.89□□□□□ -2.11
Scaf1Q5U4C3 Gm6272-201ENSMUST00000121256 171 ntBASIC1.89□□□□□ -2.11
Scaf1Q5U4C3 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.89□□□□□ -2.11
Scaf1Q5U4C3 Gm22559-201ENSMUST00000157329 134 ntBASIC1.89□□□□□ -2.11
Scaf1Q5U4C3 Gm22541-201ENSMUST00000158165 127 ntBASIC1.89□□□□□ -2.11
Scaf1Q5U4C3 Mir3098-201ENSMUST00000175416 87 ntBASIC1.89□□□□□ -2.11
Scaf1Q5U4C3 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Scaf1Q5U4C3 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Scaf1Q5U4C3 Gm23652-201ENSMUST00000116752 107 ntBASIC1.88□□□□□ -2.11
Scaf1Q5U4C3 Gm23661-201ENSMUST00000122630 87 ntBASIC1.88□□□□□ -2.11
Scaf1Q5U4C3 Gm24648-201ENSMUST00000157111 132 ntBASIC1.88□□□□□ -2.11
Scaf1Q5U4C3 Gm24009-201ENSMUST00000157734 93 ntBASIC1.88□□□□□ -2.11
Scaf1Q5U4C3 Gm23261-201ENSMUST00000158316 136 ntBASIC1.88□□□□□ -2.11
Scaf1Q5U4C3 Gm23122-201ENSMUST00000157645 103 ntBASIC1.87□□□□□ -2.11
Scaf1Q5U4C3 Mir6240-201ENSMUST00000184281 117 ntBASIC1.87□□□□□ -2.11
Scaf1Q5U4C3 Mir101a-201ENSMUST00000083517 83 ntBASIC1.87□□□□□ -2.11
Scaf1Q5U4C3 Mir343-201ENSMUST00000102360 75 ntBASIC1.86□□□□□ -2.11
Scaf1Q5U4C3 Gm23336-201ENSMUST00000117023 123 ntBASIC1.86□□□□□ -2.11
Scaf1Q5U4C3 Gm23558-201ENSMUST00000157823 80 ntBASIC1.86□□□□□ -2.11
Scaf1Q5U4C3 Gm23853-201ENSMUST00000158375 104 ntBASIC1.86□□□□□ -2.11
Scaf1Q5U4C3 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
Scaf1Q5U4C3 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.86□□□□□ -2.11
Scaf1Q5U4C3 Gm25974-201ENSMUST00000158701 94 ntBASIC1.85□□□□□ -2.11
Scaf1Q5U4C3 Mir3968-201ENSMUST00000175355 100 ntBASIC1.85□□□□□ -2.11
Scaf1Q5U4C3 Mir6237-201ENSMUST00000183808 91 ntBASIC1.85□□□□□ -2.11
Scaf1Q5U4C3 Gm43206-201ENSMUST00000197990 114 ntBASIC1.85□□□□□ -2.11
Scaf1Q5U4C3 CT571266.1-201ENSMUST00000222859 153 ntBASIC1.85□□□□□ -2.11
Scaf1Q5U4C3 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC1.85□□□□□ -2.11
Scaf1Q5U4C3 Gm23347-201ENSMUST00000083823 82 ntBASIC1.85□□□□□ -2.11
Scaf1Q5U4C3 Gm26051-201ENSMUST00000104642 93 ntBASIC1.84□□□□□ -2.11
Scaf1Q5U4C3 Gm22033-201ENSMUST00000116947 90 ntBASIC1.84□□□□□ -2.11
Scaf1Q5U4C3 Gm11857-201ENSMUST00000119817 324 ntBASIC1.84□□□□□ -2.11
Scaf1Q5U4C3 Gm25056-201ENSMUST00000157372 62 ntBASIC1.84□□□□□ -2.11
Scaf1Q5U4C3 Mir6962-201ENSMUST00000199512 63 ntBASIC1.84□□□□□ -2.11
Scaf1Q5U4C3 Gm22729-201ENSMUST00000158088 129 ntBASIC1.83□□□□□ -2.12
Scaf1Q5U4C3 Gm25635-201ENSMUST00000082675 131 ntBASIC1.83□□□□□ -2.12
Scaf1Q5U4C3 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.82□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 159.2 ms