Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Mir7675-201ENSMUST00000184262 58 ntBASIC1.89□□□□□ -2.11
Rnf43Q5NCP0 Mir7241-201ENSMUST00000184532 64 ntBASIC1.89□□□□□ -2.11
Rnf43Q5NCP0 Gm28767-201ENSMUST00000188601 114 ntBASIC1.89□□□□□ -2.11
Rnf43Q5NCP0 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.89□□□□□ -2.11
Rnf43Q5NCP0 Mir544-201ENSMUST00000103813 78 ntBASIC1.88□□□□□ -2.11
Rnf43Q5NCP0 Gm24783-201ENSMUST00000157639 100 ntBASIC1.88□□□□□ -2.11
Rnf43Q5NCP0 Gm22802-201ENSMUST00000175621 89 ntBASIC1.88□□□□□ -2.11
Rnf43Q5NCP0 Gm22544-201ENSMUST00000104349 127 ntBASIC1.87□□□□□ -2.11
Rnf43Q5NCP0 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.87□□□□□ -2.11
Rnf43Q5NCP0 Gm26038-201ENSMUST00000158151 106 ntBASIC1.87□□□□□ -2.11
Rnf43Q5NCP0 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC1.87□□□□□ -2.11
Rnf43Q5NCP0 Mir6995-201ENSMUST00000183658 71 ntBASIC1.87□□□□□ -2.11
Rnf43Q5NCP0 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Rnf43Q5NCP0 Gm22761-201ENSMUST00000102278 96 ntBASIC1.86□□□□□ -2.11
Rnf43Q5NCP0 Gm24396-201ENSMUST00000116905 93 ntBASIC1.86□□□□□ -2.11
Rnf43Q5NCP0 Mir6950-201ENSMUST00000184438 73 ntBASIC1.86□□□□□ -2.11
Rnf43Q5NCP0 Mir509-201ENSMUST00000196089 75 ntBASIC1.86□□□□□ -2.11
Rnf43Q5NCP0 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC1.86□□□□□ -2.11
Rnf43Q5NCP0 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Rnf43Q5NCP0 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.85□□□□□ -2.11
Rnf43Q5NCP0 Gm24406-201ENSMUST00000083026 128 ntBASIC1.85□□□□□ -2.11
Rnf43Q5NCP0 Gm23661-201ENSMUST00000122630 87 ntBASIC1.84□□□□□ -2.11
Rnf43Q5NCP0 Gm15692-201ENSMUST00000152173 352 ntBASIC1.84□□□□□ -2.11
Rnf43Q5NCP0 Gm24648-201ENSMUST00000157111 132 ntBASIC1.84□□□□□ -2.11
Rnf43Q5NCP0 Gm25870-201ENSMUST00000179845 79 ntBASIC1.84□□□□□ -2.11
Rnf43Q5NCP0 Gm38295-201ENSMUST00000191951 151 ntBASIC1.84□□□□□ -2.11
Rnf43Q5NCP0 Gm25629-201ENSMUST00000084001 107 ntBASIC1.84□□□□□ -2.11
Rnf43Q5NCP0 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.83□□□□□ -2.12
Rnf43Q5NCP0 Gm12469-201ENSMUST00000117623 207 ntBASIC1.83□□□□□ -2.12
Rnf43Q5NCP0 Mir3064-201ENSMUST00000175532 67 ntBASIC1.83□□□□□ -2.12
Rnf43Q5NCP0 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Rnf43Q5NCP0 Gm24151-201ENSMUST00000082758 141 ntBASIC1.83□□□□□ -2.12
Rnf43Q5NCP0 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Rnf43Q5NCP0 Gm23881-201ENSMUST00000116872 66 ntBASIC1.82□□□□□ -2.12
Rnf43Q5NCP0 Mup-ps5-201ENSMUST00000118667 99 ntBASIC1.82□□□□□ -2.12
Rnf43Q5NCP0 Gm27544-201ENSMUST00000185069 155 ntBASIC1.82□□□□□ -2.12
Rnf43Q5NCP0 Gm28794-201ENSMUST00000185276 136 ntBASIC1.82□□□□□ -2.12
Rnf43Q5NCP0 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.82□□□□□ -2.12
Rnf43Q5NCP0 Gm43927-201ENSMUST00000204599 117 ntBASIC1.82□□□□□ -2.12
Rnf43Q5NCP0 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.82□□□□□ -2.12
Rnf43Q5NCP0 Snord60-201ENSMUST00000082834 78 ntBASIC1.82□□□□□ -2.12
Rnf43Q5NCP0 Mir148b-201ENSMUST00000083626 97 ntBASIC1.82□□□□□ -2.12
Rnf43Q5NCP0 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Rnf43Q5NCP0 Gm25068-201ENSMUST00000103895 110 ntBASIC1.81□□□□□ -2.12
Rnf43Q5NCP0 Gm23106-201ENSMUST00000157554 101 ntBASIC1.81□□□□□ -2.12
Rnf43Q5NCP0 Gm25552-201ENSMUST00000158081 91 ntBASIC1.81□□□□□ -2.12
Rnf43Q5NCP0 Gm44384-201ENSMUST00000200208 114 ntBASIC1.81□□□□□ -2.12
Rnf43Q5NCP0 Gm25650-201ENSMUST00000083784 162 ntBASIC1.81□□□□□ -2.12
Rnf43Q5NCP0 Gm25056-201ENSMUST00000157372 62 ntBASIC1.8□□□□□ -2.12
Rnf43Q5NCP0 Gm24728-201ENSMUST00000158226 125 ntBASIC1.8□□□□□ -2.12
Rnf43Q5NCP0 Gm25958-201ENSMUST00000175114 71 ntBASIC1.8□□□□□ -2.12
Rnf43Q5NCP0 Gm22887-201ENSMUST00000178586 107 ntBASIC1.8□□□□□ -2.12
Rnf43Q5NCP0 Gm23714-201ENSMUST00000179259 105 ntBASIC1.8□□□□□ -2.12
Rnf43Q5NCP0 Gm27511-201ENSMUST00000183502 127 ntBASIC1.8□□□□□ -2.12
Rnf43Q5NCP0 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Rnf43Q5NCP0 Gm25619-201ENSMUST00000122621 104 ntBASIC1.79□□□□□ -2.12
Rnf43Q5NCP0 Gm25622-201ENSMUST00000157217 104 ntBASIC1.79□□□□□ -2.12
Rnf43Q5NCP0 Gm24547-201ENSMUST00000158649 149 ntBASIC1.79□□□□□ -2.12
Rnf43Q5NCP0 Gm22413-201ENSMUST00000175465 85 ntBASIC1.79□□□□□ -2.12
Rnf43Q5NCP0 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.78□□□□□ -2.12
Rnf43Q5NCP0 Gm24009-201ENSMUST00000157734 93 ntBASIC1.78□□□□□ -2.12
Rnf43Q5NCP0 Gm22164-201ENSMUST00000158413 106 ntBASIC1.78□□□□□ -2.12
Rnf43Q5NCP0 Gm24221-201ENSMUST00000158833 313 ntBASIC1.78□□□□□ -2.12
Rnf43Q5NCP0 Gm24494-201ENSMUST00000083804 81 ntBASIC1.78□□□□□ -2.12
Rnf43Q5NCP0 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
Rnf43Q5NCP0 Gm25609-201ENSMUST00000104019 104 ntBASIC1.77□□□□□ -2.13
Rnf43Q5NCP0 Gm26359-201ENSMUST00000158873 101 ntBASIC1.77□□□□□ -2.13
Rnf43Q5NCP0 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
Rnf43Q5NCP0 Gm25756-201ENSMUST00000103990 136 ntBASIC1.76□□□□□ -2.13
Rnf43Q5NCP0 Gm26029-201ENSMUST00000158659 132 ntBASIC1.76□□□□□ -2.13
Rnf43Q5NCP0 Gm23477-201ENSMUST00000158882 128 ntBASIC1.76□□□□□ -2.13
Rnf43Q5NCP0 Gm24331-201ENSMUST00000175099 67 ntBASIC1.76□□□□□ -2.13
Rnf43Q5NCP0 Gm23801-201ENSMUST00000175561 67 ntBASIC1.76□□□□□ -2.13
Rnf43Q5NCP0 Gm24485-201ENSMUST00000178283 67 ntBASIC1.76□□□□□ -2.13
Rnf43Q5NCP0 Gm22753-201ENSMUST00000083657 107 ntBASIC1.76□□□□□ -2.13
Rnf43Q5NCP0 Gm22785-201ENSMUST00000104087 132 ntBASIC1.75□□□□□ -2.13
Rnf43Q5NCP0 Gm25279-201ENSMUST00000122608 133 ntBASIC1.75□□□□□ -2.13
Rnf43Q5NCP0 Gm24915-201ENSMUST00000157288 78 ntBASIC1.75□□□□□ -2.13
Rnf43Q5NCP0 Gm25663-201ENSMUST00000157698 135 ntBASIC1.75□□□□□ -2.13
Rnf43Q5NCP0 Gm23856-201ENSMUST00000158380 99 ntBASIC1.75□□□□□ -2.13
Rnf43Q5NCP0 Gm23967-201ENSMUST00000175062 78 ntBASIC1.75□□□□□ -2.13
Rnf43Q5NCP0 Gm23267-201ENSMUST00000178490 132 ntBASIC1.75□□□□□ -2.13
Rnf43Q5NCP0 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.75□□□□□ -2.13
Rnf43Q5NCP0 Gm18433-201ENSMUST00000192747 197 ntBASIC1.75□□□□□ -2.13
Rnf43Q5NCP0 U6.1-201ENSMUST00000157443 101 ntBASIC1.74□□□□□ -2.13
Rnf43Q5NCP0 Gm25600-201ENSMUST00000158357 106 ntBASIC1.74□□□□□ -2.13
Rnf43Q5NCP0 Gm23857-201ENSMUST00000158379 111 ntBASIC1.74□□□□□ -2.13
Rnf43Q5NCP0 Gm26158-201ENSMUST00000158973 119 ntBASIC1.74□□□□□ -2.13
Rnf43Q5NCP0 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.74□□□□□ -2.13
Rnf43Q5NCP0 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Rnf43Q5NCP0 Gm24379-201ENSMUST00000122695 86 ntBASIC1.73□□□□□ -2.13
Rnf43Q5NCP0 Gm24902-201ENSMUST00000158126 123 ntBASIC1.73□□□□□ -2.13
Rnf43Q5NCP0 Gm24165-201ENSMUST00000082718 128 ntBASIC1.73□□□□□ -2.13
Rnf43Q5NCP0 Gm22809-201ENSMUST00000082743 156 ntBASIC1.73□□□□□ -2.13
Rnf43Q5NCP0 Mir709-201ENSMUST00000102190 88 ntBASIC1.72□□□□□ -2.13
Rnf43Q5NCP0 Gm25991-201ENSMUST00000102439 99 ntBASIC1.72□□□□□ -2.13
Rnf43Q5NCP0 Mir3096-201ENSMUST00000116685 71 ntBASIC1.72□□□□□ -2.13
Rnf43Q5NCP0 Gm24129-201ENSMUST00000158537 97 ntBASIC1.72□□□□□ -2.13
Rnf43Q5NCP0 Gm25974-201ENSMUST00000158701 94 ntBASIC1.72□□□□□ -2.13
Rnf43Q5NCP0 Gm27297-201ENSMUST00000183395 105 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 153.8 ms