Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Mir1933-201ENSMUST00000158930 88 ntBASIC1.59□□□□□ -2.15
Shisa3Q3UPR0 Gm25870-201ENSMUST00000179845 79 ntBASIC1.59□□□□□ -2.15
Shisa3Q3UPR0 Mir7226-201ENSMUST00000184953 60 ntBASIC1.59□□□□□ -2.15
Shisa3Q3UPR0 Gm44396-201ENSMUST00000199843 114 ntBASIC1.59□□□□□ -2.15
Shisa3Q3UPR0 Gm43944-201ENSMUST00000205220 120 ntBASIC1.59□□□□□ -2.15
Shisa3Q3UPR0 Gm23237-201ENSMUST00000104639 92 ntBASIC1.58□□□□□ -2.16
Shisa3Q3UPR0 Gm22030-201ENSMUST00000116942 63 ntBASIC1.58□□□□□ -2.16
Shisa3Q3UPR0 Gm24495-201ENSMUST00000178575 79 ntBASIC1.58□□□□□ -2.16
Shisa3Q3UPR0 Gm22253-201ENSMUST00000179870 79 ntBASIC1.58□□□□□ -2.16
Shisa3Q3UPR0 Gm27420-201ENSMUST00000183823 79 ntBASIC1.58□□□□□ -2.16
Shisa3Q3UPR0 Mir6901-201ENSMUST00000185062 62 ntBASIC1.58□□□□□ -2.16
Shisa3Q3UPR0 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.57□□□□□ -2.16
Shisa3Q3UPR0 Gm25693-201ENSMUST00000175443 85 ntBASIC1.57□□□□□ -2.16
Shisa3Q3UPR0 Gm27511-201ENSMUST00000183502 127 ntBASIC1.57□□□□□ -2.16
Shisa3Q3UPR0 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.57□□□□□ -2.16
Shisa3Q3UPR0 Mir216b-201ENSMUST00000102363 86 ntBASIC1.56□□□□□ -2.16
Shisa3Q3UPR0 Gm24290-201ENSMUST00000157634 96 ntBASIC1.56□□□□□ -2.16
Shisa3Q3UPR0 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.56□□□□□ -2.16
Shisa3Q3UPR0 Gm23301-201ENSMUST00000082713 65 ntBASIC1.56□□□□□ -2.16
Shisa3Q3UPR0 Mir653-201ENSMUST00000102402 85 ntBASIC1.55□□□□□ -2.16
Shisa3Q3UPR0 Gm25541-201ENSMUST00000116888 126 ntBASIC1.55□□□□□ -2.16
Shisa3Q3UPR0 Gm11333-201ENSMUST00000119479 148 ntBASIC1.55□□□□□ -2.16
Shisa3Q3UPR0 U6.1-201ENSMUST00000157443 101 ntBASIC1.55□□□□□ -2.16
Shisa3Q3UPR0 Gm22788-201ENSMUST00000157876 61 ntBASIC1.55□□□□□ -2.16
Shisa3Q3UPR0 Gm23291-201ENSMUST00000175611 78 ntBASIC1.55□□□□□ -2.16
Shisa3Q3UPR0 Gm24202-201ENSMUST00000082948 103 ntBASIC1.55□□□□□ -2.16
Shisa3Q3UPR0 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.55□□□□□ -2.16
Shisa3Q3UPR0 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
Shisa3Q3UPR0 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Shisa3Q3UPR0 AC154506.4-201ENSMUST00000224898 3416 ntBASIC1.54□□□□□ -2.16
Shisa3Q3UPR0 Gm23950-201ENSMUST00000104026 129 ntBASIC1.54□□□□□ -2.16
Shisa3Q3UPR0 Mir3096-201ENSMUST00000116685 71 ntBASIC1.54□□□□□ -2.16
Shisa3Q3UPR0 Gm24262-201ENSMUST00000157431 144 ntBASIC1.54□□□□□ -2.16
Shisa3Q3UPR0 Gm22551-201ENSMUST00000157795 103 ntBASIC1.54□□□□□ -2.16
Shisa3Q3UPR0 AC116319.1-201ENSMUST00000227765 222 ntBASIC1.54□□□□□ -2.16
Shisa3Q3UPR0 Gm23130-201ENSMUST00000104252 74 ntBASIC1.53□□□□□ -2.16
Shisa3Q3UPR0 Gm25622-201ENSMUST00000157217 104 ntBASIC1.53□□□□□ -2.16
Shisa3Q3UPR0 Gm22541-201ENSMUST00000158165 127 ntBASIC1.53□□□□□ -2.16
Shisa3Q3UPR0 Gm22466-201ENSMUST00000175278 69 ntBASIC1.53□□□□□ -2.16
Shisa3Q3UPR0 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.53□□□□□ -2.16
Shisa3Q3UPR0 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Shisa3Q3UPR0 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.53□□□□□ -2.16
Shisa3Q3UPR0 Gm23570-201ENSMUST00000083029 104 ntBASIC1.53□□□□□ -2.16
Shisa3Q3UPR0 Gm23951-201ENSMUST00000104029 132 ntBASIC1.52□□□□□ -2.17
Shisa3Q3UPR0 Gm22386-201ENSMUST00000158192 129 ntBASIC1.52□□□□□ -2.17
Shisa3Q3UPR0 Gm25936-201ENSMUST00000179952 114 ntBASIC1.52□□□□□ -2.17
Shisa3Q3UPR0 Mir6406-201ENSMUST00000183592 120 ntBASIC1.52□□□□□ -2.17
Shisa3Q3UPR0 Gm24271-201ENSMUST00000102327 111 ntBASIC1.51□□□□□ -2.17
Shisa3Q3UPR0 Gm23203-201ENSMUST00000104374 107 ntBASIC1.51□□□□□ -2.17
Shisa3Q3UPR0 Gm23109-201ENSMUST00000116867 126 ntBASIC1.5□□□□□ -2.17
Shisa3Q3UPR0 Gm23761-201ENSMUST00000158347 104 ntBASIC1.5□□□□□ -2.17
Shisa3Q3UPR0 Gm25160-201ENSMUST00000158914 102 ntBASIC1.5□□□□□ -2.17
Shisa3Q3UPR0 Mir6351-201ENSMUST00000183826 99 ntBASIC1.5□□□□□ -2.17
Shisa3Q3UPR0 Mir8090-201ENSMUST00000185078 136 ntBASIC1.5□□□□□ -2.17
Shisa3Q3UPR0 Gm43907-201ENSMUST00000203128 117 ntBASIC1.5□□□□□ -2.17
Shisa3Q3UPR0 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.5□□□□□ -2.17
Shisa3Q3UPR0 Gm26224-201ENSMUST00000082506 80 ntBASIC1.5□□□□□ -2.17
Shisa3Q3UPR0 Mir30a-201ENSMUST00000083471 71 ntBASIC1.5□□□□□ -2.17
Shisa3Q3UPR0 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Shisa3Q3UPR0 Snord69-201ENSMUST00000104024 80 ntBASIC1.49□□□□□ -2.17
Shisa3Q3UPR0 Mir669n-201ENSMUST00000158636 54 ntBASIC1.49□□□□□ -2.17
Shisa3Q3UPR0 Gm25366-201ENSMUST00000158845 124 ntBASIC1.49□□□□□ -2.17
Shisa3Q3UPR0 Gm26499-201ENSMUST00000178544 79 ntBASIC1.49□□□□□ -2.17
Shisa3Q3UPR0 Gm26096-201ENSMUST00000179084 79 ntBASIC1.49□□□□□ -2.17
Shisa3Q3UPR0 Mir7017-201ENSMUST00000184894 62 ntBASIC1.49□□□□□ -2.17
Shisa3Q3UPR0 Gm43512-201ENSMUST00000198495 176 ntBASIC1.49□□□□□ -2.17
Shisa3Q3UPR0 Gm23376-201ENSMUST00000082938 160 ntBASIC1.49□□□□□ -2.17
Shisa3Q3UPR0 Mir758-201ENSMUST00000103260 81 ntBASIC1.48□□□□□ -2.17
Shisa3Q3UPR0 Gm25609-201ENSMUST00000104019 104 ntBASIC1.48□□□□□ -2.17
Shisa3Q3UPR0 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1.48□□□□□ -2.17
Shisa3Q3UPR0 Mir1197-201ENSMUST00000117037 120 ntBASIC1.48□□□□□ -2.17
Shisa3Q3UPR0 Gm22100-201ENSMUST00000157926 63 ntBASIC1.48□□□□□ -2.17
Shisa3Q3UPR0 Gm27248-201ENSMUST00000184004 166 ntBASIC1.48□□□□□ -2.17
Shisa3Q3UPR0 Mir7026-201ENSMUST00000184384 67 ntBASIC1.48□□□□□ -2.17
Shisa3Q3UPR0 Mir7678-201ENSMUST00000185076 71 ntBASIC1.48□□□□□ -2.17
Shisa3Q3UPR0 Gm6293-201ENSMUST00000050339 195 ntBASIC1.48□□□□□ -2.17
Shisa3Q3UPR0 mt-Tl2-201ENSMUST00000082417 71 ntBASIC1.48□□□□□ -2.17
Shisa3Q3UPR0 Snora75-201ENSMUST00000082903 133 ntBASIC1.48□□□□□ -2.17
Shisa3Q3UPR0 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Shisa3Q3UPR0 Gm25416-201ENSMUST00000104221 107 ntBASIC1.47□□□□□ -2.17
Shisa3Q3UPR0 Gm6985-201ENSMUST00000121255 271 ntBASIC1.47□□□□□ -2.17
Shisa3Q3UPR0 Gm22603-201ENSMUST00000157603 96 ntBASIC1.47□□□□□ -2.17
Shisa3Q3UPR0 Gm24808-201ENSMUST00000157993 118 ntBASIC1.47□□□□□ -2.17
Shisa3Q3UPR0 Gm24549-201ENSMUST00000158647 139 ntBASIC1.47□□□□□ -2.17
Shisa3Q3UPR0 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.47□□□□□ -2.17
Shisa3Q3UPR0 Gm38323-201ENSMUST00000192450 210 ntBASIC1.47□□□□□ -2.17
Shisa3Q3UPR0 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.47□□□□□ -2.17
Shisa3Q3UPR0 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Shisa3Q3UPR0 Gm24177-201ENSMUST00000158927 131 ntBASIC1.46□□□□□ -2.18
Shisa3Q3UPR0 Gm24174-201ENSMUST00000158933 111 ntBASIC1.46□□□□□ -2.18
Shisa3Q3UPR0 Gm22095-201ENSMUST00000158984 150 ntBASIC1.46□□□□□ -2.18
Shisa3Q3UPR0 Gm22723-201ENSMUST00000083820 129 ntBASIC1.46□□□□□ -2.18
Shisa3Q3UPR0 Gm25991-201ENSMUST00000102439 99 ntBASIC1.45□□□□□ -2.18
Shisa3Q3UPR0 Gm23991-201ENSMUST00000117033 93 ntBASIC1.45□□□□□ -2.18
Shisa3Q3UPR0 Gm18433-201ENSMUST00000192747 197 ntBASIC1.45□□□□□ -2.18
Shisa3Q3UPR0 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.45□□□□□ -2.18
Shisa3Q3UPR0 Gm24165-201ENSMUST00000082718 128 ntBASIC1.45□□□□□ -2.18
Shisa3Q3UPR0 Mir377-201ENSMUST00000083504 68 ntBASIC1.45□□□□□ -2.18
Shisa3Q3UPR0 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Shisa3Q3UPR0 Mir873a-201ENSMUST00000104863 77 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 167.8 ms