Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm23651-201ENSMUST00000116755 120 ntBASIC0.31□□□□□ -2.36
Brf2Q3UAW9 Gm23986-201ENSMUST00000157144 63 ntBASIC0.31□□□□□ -2.36
Brf2Q3UAW9 Gm24009-201ENSMUST00000157734 93 ntBASIC0.31□□□□□ -2.36
Brf2Q3UAW9 Gm26369-201ENSMUST00000157825 100 ntBASIC0.31□□□□□ -2.36
Brf2Q3UAW9 Gm26285-201ENSMUST00000177923 107 ntBASIC0.31□□□□□ -2.36
Brf2Q3UAW9 Gm44828-201ENSMUST00000203745 106 ntBASIC0.31□□□□□ -2.36
Brf2Q3UAW9 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.31□□□□□ -2.36
Brf2Q3UAW9 AC124687.1-201ENSMUST00000221868 189 ntBASIC0.31□□□□□ -2.36
Brf2Q3UAW9 Gm23622-201ENSMUST00000082460 107 ntBASIC0.31□□□□□ -2.36
Brf2Q3UAW9 Gm23969-201ENSMUST00000083324 74 ntBASIC0.31□□□□□ -2.36
Brf2Q3UAW9 Mir344-201ENSMUST00000083634 95 ntBASIC0.31□□□□□ -2.36
Brf2Q3UAW9 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.3□□□□□ -2.36
Brf2Q3UAW9 Mir3105-201ENSMUST00000175480 85 ntBASIC0.3□□□□□ -2.36
Brf2Q3UAW9 Gm26116-201ENSMUST00000175600 77 ntBASIC0.3□□□□□ -2.36
Brf2Q3UAW9 Gm43324-201ENSMUST00000197482 289 ntBASIC0.3□□□□□ -2.36
Brf2Q3UAW9 Gm10351-201ENSMUST00000087694 125 ntBASIC0.3□□□□□ -2.36
Brf2Q3UAW9 Gm25915-201ENSMUST00000104265 126 ntBASIC0.29□□□□□ -2.36
Brf2Q3UAW9 Gm22842-201ENSMUST00000157709 118 ntBASIC0.29□□□□□ -2.36
Brf2Q3UAW9 Gm45197-201ENSMUST00000205288 151 ntBASIC0.29□□□□□ -2.36
Brf2Q3UAW9 Gm26202-201ENSMUST00000082910 65 ntBASIC0.29□□□□□ -2.36
Brf2Q3UAW9 Gm25629-201ENSMUST00000084001 107 ntBASIC0.29□□□□□ -2.36
Brf2Q3UAW9 Mir216b-201ENSMUST00000102363 86 ntBASIC0.28□□□□□ -2.36
Brf2Q3UAW9 Gm24233-201ENSMUST00000104317 122 ntBASIC0.28□□□□□ -2.36
Brf2Q3UAW9 Gm23321-201ENSMUST00000104465 126 ntBASIC0.28□□□□□ -2.36
Brf2Q3UAW9 Gm12086-201ENSMUST00000120863 228 ntBASIC0.28□□□□□ -2.36
Brf2Q3UAW9 Gm22558-201ENSMUST00000157326 95 ntBASIC0.28□□□□□ -2.36
Brf2Q3UAW9 Gm26152-201ENSMUST00000157427 101 ntBASIC0.28□□□□□ -2.36
Brf2Q3UAW9 Gm22297-201ENSMUST00000083312 106 ntBASIC0.28□□□□□ -2.36
Brf2Q3UAW9 Snord64-201ENSMUST00000104003 67 ntBASIC0.27□□□□□ -2.37
Brf2Q3UAW9 Scarna8-201ENSMUST00000158333 131 ntBASIC0.27□□□□□ -2.37
Brf2Q3UAW9 Gm23384-201ENSMUST00000158593 103 ntBASIC0.27□□□□□ -2.37
Brf2Q3UAW9 Gm27297-201ENSMUST00000183395 105 ntBASIC0.27□□□□□ -2.37
Brf2Q3UAW9 Gm23507-201ENSMUST00000083078 107 ntBASIC0.27□□□□□ -2.37
Brf2Q3UAW9 Mir670-201ENSMUST00000102380 100 ntBASIC0.26□□□□□ -2.37
Brf2Q3UAW9 Gm24342-201ENSMUST00000103907 104 ntBASIC0.26□□□□□ -2.37
Brf2Q3UAW9 Gm22149-201ENSMUST00000104442 136 ntBASIC0.26□□□□□ -2.37
Brf2Q3UAW9 Gm23065-201ENSMUST00000158236 130 ntBASIC0.26□□□□□ -2.37
Brf2Q3UAW9 Gm26498-201ENSMUST00000177799 79 ntBASIC0.26□□□□□ -2.37
Brf2Q3UAW9 Gm26230-201ENSMUST00000180141 79 ntBASIC0.26□□□□□ -2.37
Brf2Q3UAW9 Gm42845-201ENSMUST00000197766 105 ntBASIC0.26□□□□□ -2.37
Brf2Q3UAW9 Mir1a-1-201ENSMUST00000093635 77 ntBASIC0.26□□□□□ -2.37
Brf2Q3UAW9 Gm22788-201ENSMUST00000157876 61 ntBASIC0.25□□□□□ -2.37
Brf2Q3UAW9 Gm27717-201ENSMUST00000183933 151 ntBASIC0.25□□□□□ -2.37
Brf2Q3UAW9 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
Brf2Q3UAW9 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.25□□□□□ -2.37
Brf2Q3UAW9 mt-Tt-201ENSMUST00000082422 67 ntBASIC0.25□□□□□ -2.37
Brf2Q3UAW9 Gm22303-201ENSMUST00000082686 122 ntBASIC0.25□□□□□ -2.37
Brf2Q3UAW9 Gm24833-201ENSMUST00000116775 120 ntBASIC0.24□□□□□ -2.37
Brf2Q3UAW9 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC0.24□□□□□ -2.37
Brf2Q3UAW9 Gm38295-201ENSMUST00000191951 151 ntBASIC0.24□□□□□ -2.37
Brf2Q3UAW9 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
Brf2Q3UAW9 Gm22652-201ENSMUST00000083207 131 ntBASIC0.24□□□□□ -2.37
Brf2Q3UAW9 Gm22089-201ENSMUST00000158336 102 ntBASIC0.23□□□□□ -2.37
Brf2Q3UAW9 Gm22503-201ENSMUST00000158983 115 ntBASIC0.23□□□□□ -2.37
Brf2Q3UAW9 Gm45429-201ENSMUST00000209527 172 ntBASIC0.23□□□□□ -2.37
Brf2Q3UAW9 Gm25408-201ENSMUST00000104104 133 ntBASIC0.22□□□□□ -2.37
Brf2Q3UAW9 Gm23654-201ENSMUST00000116758 126 ntBASIC0.22□□□□□ -2.37
Brf2Q3UAW9 Gm24399-201ENSMUST00000157869 74 ntBASIC0.22□□□□□ -2.37
Brf2Q3UAW9 Mir3108-201ENSMUST00000175500 79 ntBASIC0.22□□□□□ -2.37
Brf2Q3UAW9 Mir6365-201ENSMUST00000183990 101 ntBASIC0.22□□□□□ -2.37
Brf2Q3UAW9 Gm28270-201ENSMUST00000188550 109 ntBASIC0.22□□□□□ -2.37
Brf2Q3UAW9 Gm28328-201ENSMUST00000188869 109 ntBASIC0.22□□□□□ -2.37
Brf2Q3UAW9 Gm25635-201ENSMUST00000082675 131 ntBASIC0.22□□□□□ -2.37
Brf2Q3UAW9 Gm23678-201ENSMUST00000083157 107 ntBASIC0.22□□□□□ -2.37
Brf2Q3UAW9 Snord80-201ENSMUST00000083801 81 ntBASIC0.22□□□□□ -2.37
Brf2Q3UAW9 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC0.21□□□□□ -2.38
Brf2Q3UAW9 Gm22319-201ENSMUST00000157147 122 ntBASIC0.21□□□□□ -2.38
Brf2Q3UAW9 Gm10813-201ENSMUST00000099936 90 ntBASIC0.21□□□□□ -2.38
Brf2Q3UAW9 Gm22031-201ENSMUST00000116945 126 ntBASIC0.2□□□□□ -2.38
Brf2Q3UAW9 Gm44327-201ENSMUST00000200068 117 ntBASIC0.2□□□□□ -2.38
Brf2Q3UAW9 Gm43927-201ENSMUST00000204599 117 ntBASIC0.2□□□□□ -2.38
Brf2Q3UAW9 Snord78-201ENSMUST00000104032 66 ntBASIC0.19□□□□□ -2.38
Brf2Q3UAW9 Gm23708-201ENSMUST00000104367 123 ntBASIC0.19□□□□□ -2.38
Brf2Q3UAW9 Gm23601-201ENSMUST00000157259 131 ntBASIC0.19□□□□□ -2.38
Brf2Q3UAW9 Gm23900-201ENSMUST00000157569 108 ntBASIC0.19□□□□□ -2.38
Brf2Q3UAW9 Gm24686-201ENSMUST00000157755 93 ntBASIC0.19□□□□□ -2.38
Brf2Q3UAW9 Gm25887-201ENSMUST00000157777 84 ntBASIC0.19□□□□□ -2.38
Brf2Q3UAW9 Gm25006-201ENSMUST00000083813 107 ntBASIC0.19□□□□□ -2.38
Brf2Q3UAW9 Gm25416-201ENSMUST00000104221 107 ntBASIC0.18□□□□□ -2.38
Brf2Q3UAW9 Gm26133-201ENSMUST00000157363 100 ntBASIC0.18□□□□□ -2.38
Brf2Q3UAW9 Gm25014-201ENSMUST00000158401 103 ntBASIC0.18□□□□□ -2.38
Brf2Q3UAW9 Mir3473d-201ENSMUST00000175346 81 ntBASIC0.18□□□□□ -2.38
Brf2Q3UAW9 Mir8116-201ENSMUST00000184134 97 ntBASIC0.18□□□□□ -2.38
Brf2Q3UAW9 Gm23126-201ENSMUST00000104260 134 ntBASIC0.17□□□□□ -2.38
Brf2Q3UAW9 Gm24648-201ENSMUST00000157111 132 ntBASIC0.17□□□□□ -2.38
Brf2Q3UAW9 Gm28001-201ENSMUST00000183561 117 ntBASIC0.17□□□□□ -2.38
Brf2Q3UAW9 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.17□□□□□ -2.38
Brf2Q3UAW9 mt-Tc-201ENSMUST00000082400 66 ntBASIC0.17□□□□□ -2.38
Brf2Q3UAW9 Gm24208-201ENSMUST00000082783 135 ntBASIC0.17□□□□□ -2.38
Brf2Q3UAW9 Gm26062-201ENSMUST00000083379 107 ntBASIC0.17□□□□□ -2.38
Brf2Q3UAW9 Mir710-201ENSMUST00000102088 110 ntBASIC0.16□□□□□ -2.38
Brf2Q3UAW9 Gm25370-201ENSMUST00000158159 94 ntBASIC0.16□□□□□ -2.38
Brf2Q3UAW9 Gm23821-201ENSMUST00000158738 106 ntBASIC0.16□□□□□ -2.38
Brf2Q3UAW9 Gm25952-201ENSMUST00000175329 74 ntBASIC0.16□□□□□ -2.38
Brf2Q3UAW9 Gm25618-201ENSMUST00000179484 107 ntBASIC0.16□□□□□ -2.38
Brf2Q3UAW9 Gm26712-201ENSMUST00000180813 217 ntBASIC0.16□□□□□ -2.38
Brf2Q3UAW9 Gm43907-201ENSMUST00000203128 117 ntBASIC0.16□□□□□ -2.38
Brf2Q3UAW9 Mir18-201ENSMUST00000083469 96 ntBASIC0.16□□□□□ -2.38
Brf2Q3UAW9 Gm23344-201ENSMUST00000083818 68 ntBASIC0.16□□□□□ -2.38
Brf2Q3UAW9 Gm24468-201ENSMUST00000104489 104 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 76,532 protein–RNA pairs in 146.1 ms