Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Mir6390-201ENSMUST00000184405 129 ntBASIC0.79□□□□□ -2.28
Ssbp4Q3U4B1 Gm44301-201ENSMUST00000200362 143 ntBASIC0.79□□□□□ -2.28
Ssbp4Q3U4B1 Gm43944-201ENSMUST00000205220 120 ntBASIC0.79□□□□□ -2.28
Ssbp4Q3U4B1 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.79□□□□□ -2.28
Ssbp4Q3U4B1 Snord60-201ENSMUST00000082834 78 ntBASIC0.79□□□□□ -2.28
Ssbp4Q3U4B1 Mir802-201ENSMUST00000103258 97 ntBASIC0.78□□□□□ -2.28
Ssbp4Q3U4B1 Gm22544-201ENSMUST00000104349 127 ntBASIC0.78□□□□□ -2.28
Ssbp4Q3U4B1 Gm22319-201ENSMUST00000157147 122 ntBASIC0.78□□□□□ -2.28
Ssbp4Q3U4B1 Gm25887-201ENSMUST00000157777 84 ntBASIC0.78□□□□□ -2.28
Ssbp4Q3U4B1 Gm23351-201ENSMUST00000158427 125 ntBASIC0.78□□□□□ -2.28
Ssbp4Q3U4B1 Gm25901-201ENSMUST00000158494 130 ntBASIC0.78□□□□□ -2.28
Ssbp4Q3U4B1 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.78□□□□□ -2.29
Ssbp4Q3U4B1 Gm23881-201ENSMUST00000116872 66 ntBASIC0.77□□□□□ -2.29
Ssbp4Q3U4B1 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.77□□□□□ -2.29
Ssbp4Q3U4B1 Gm25968-201ENSMUST00000157167 100 ntBASIC0.77□□□□□ -2.29
Ssbp4Q3U4B1 Gm25393-201ENSMUST00000157336 285 ntBASIC0.77□□□□□ -2.29
Ssbp4Q3U4B1 Gm24476-201ENSMUST00000157437 131 ntBASIC0.77□□□□□ -2.29
Ssbp4Q3U4B1 Gm26290-201ENSMUST00000158891 145 ntBASIC0.77□□□□□ -2.29
Ssbp4Q3U4B1 Gm22565-201ENSMUST00000175540 69 ntBASIC0.77□□□□□ -2.29
Ssbp4Q3U4B1 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
Ssbp4Q3U4B1 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.77□□□□□ -2.29
Ssbp4Q3U4B1 Mir7-1-201ENSMUST00000083500 108 ntBASIC0.77□□□□□ -2.29
Ssbp4Q3U4B1 Gm22753-201ENSMUST00000083657 107 ntBASIC0.77□□□□□ -2.29
Ssbp4Q3U4B1 Mir764-201ENSMUST00000103259 108 ntBASIC0.76□□□□□ -2.29
Ssbp4Q3U4B1 Gm12469-201ENSMUST00000117623 207 ntBASIC0.76□□□□□ -2.29
Ssbp4Q3U4B1 Gm23601-201ENSMUST00000157259 131 ntBASIC0.76□□□□□ -2.29
Ssbp4Q3U4B1 Gm25370-201ENSMUST00000158159 94 ntBASIC0.76□□□□□ -2.29
Ssbp4Q3U4B1 Gm22089-201ENSMUST00000158336 102 ntBASIC0.76□□□□□ -2.29
Ssbp4Q3U4B1 Mir3079-201ENSMUST00000175428 90 ntBASIC0.76□□□□□ -2.29
Ssbp4Q3U4B1 Mir6380-201ENSMUST00000184334 81 ntBASIC0.76□□□□□ -2.29
Ssbp4Q3U4B1 Gm38323-201ENSMUST00000192450 210 ntBASIC0.76□□□□□ -2.29
Ssbp4Q3U4B1 Gm42533-201ENSMUST00000196247 157 ntBASIC0.76□□□□□ -2.29
Ssbp4Q3U4B1 Mir1a-1-201ENSMUST00000093635 77 ntBASIC0.76□□□□□ -2.29
Ssbp4Q3U4B1 Gm23065-201ENSMUST00000158236 130 ntBASIC0.75□□□□□ -2.29
Ssbp4Q3U4B1 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
Ssbp4Q3U4B1 Gm36956-201ENSMUST00000193830 214 ntBASIC0.75□□□□□ -2.29
Ssbp4Q3U4B1 Gm44469-201ENSMUST00000198558 79 ntBASIC0.75□□□□□ -2.29
Ssbp4Q3U4B1 Gm44488-201ENSMUST00000199467 119 ntBASIC0.75□□□□□ -2.29
Ssbp4Q3U4B1 Gm43977-201ENSMUST00000203970 189 ntBASIC0.75□□□□□ -2.29
Ssbp4Q3U4B1 Mir30a-201ENSMUST00000083471 71 ntBASIC0.75□□□□□ -2.29
Ssbp4Q3U4B1 Gm22466-201ENSMUST00000175278 69 ntBASIC0.74□□□□□ -2.29
Ssbp4Q3U4B1 Gm27993-201ENSMUST00000184362 85 ntBASIC0.74□□□□□ -2.29
Ssbp4Q3U4B1 Mir6394-201ENSMUST00000184738 99 ntBASIC0.74□□□□□ -2.29
Ssbp4Q3U4B1 Gm27587-201ENSMUST00000185116 163 ntBASIC0.74□□□□□ -2.29
Ssbp4Q3U4B1 Gm42506-201ENSMUST00000202009 150 ntBASIC0.74□□□□□ -2.29
Ssbp4Q3U4B1 Gm25899-201ENSMUST00000082672 141 ntBASIC0.74□□□□□ -2.29
Ssbp4Q3U4B1 Gm24524-201ENSMUST00000082925 170 ntBASIC0.74□□□□□ -2.29
Ssbp4Q3U4B1 Gm26369-201ENSMUST00000157825 100 ntBASIC0.73□□□□□ -2.29
Ssbp4Q3U4B1 Gm10548-202ENSMUST00000165672 272 ntBASIC0.73□□□□□ -2.29
Ssbp4Q3U4B1 Snord80-201ENSMUST00000083801 81 ntBASIC0.73□□□□□ -2.29
Ssbp4Q3U4B1 Mir500-201ENSMUST00000093600 92 ntBASIC0.73□□□□□ -2.29
Ssbp4Q3U4B1 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC0.72□□□□□ -2.29
Ssbp4Q3U4B1 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
Ssbp4Q3U4B1 Gm26253-201ENSMUST00000122493 103 ntBASIC0.72□□□□□ -2.29
Ssbp4Q3U4B1 Gm23857-201ENSMUST00000158379 111 ntBASIC0.72□□□□□ -2.29
Ssbp4Q3U4B1 Gm24549-201ENSMUST00000158647 139 ntBASIC0.72□□□□□ -2.29
Ssbp4Q3U4B1 Gm27974-201ENSMUST00000183415 105 ntBASIC0.72□□□□□ -2.29
Ssbp4Q3U4B1 Gm24527-201ENSMUST00000082920 107 ntBASIC0.72□□□□□ -2.29
Ssbp4Q3U4B1 Gm23244-201ENSMUST00000083375 92 ntBASIC0.72□□□□□ -2.29
Ssbp4Q3U4B1 Snord69-201ENSMUST00000104024 80 ntBASIC0.71□□□□□ -2.3
Ssbp4Q3U4B1 Gm6272-201ENSMUST00000121256 171 ntBASIC0.71□□□□□ -2.3
Ssbp4Q3U4B1 Gm25166-201ENSMUST00000158909 111 ntBASIC0.71□□□□□ -2.3
Ssbp4Q3U4B1 Gm26158-201ENSMUST00000158973 119 ntBASIC0.71□□□□□ -2.3
Ssbp4Q3U4B1 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.71□□□□□ -2.3
Ssbp4Q3U4B1 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.71□□□□□ -2.3
Ssbp4Q3U4B1 Gm23301-201ENSMUST00000082713 65 ntBASIC0.71□□□□□ -2.3
Ssbp4Q3U4B1 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
Ssbp4Q3U4B1 Gm24650-201ENSMUST00000157105 103 ntBASIC0.7□□□□□ -2.3
Ssbp4Q3U4B1 Gm22503-201ENSMUST00000158983 115 ntBASIC0.7□□□□□ -2.3
Ssbp4Q3U4B1 Mir15a-201ENSMUST00000175266 84 ntBASIC0.7□□□□□ -2.3
Ssbp4Q3U4B1 Mir6985-201ENSMUST00000184641 61 ntBASIC0.7□□□□□ -2.3
Ssbp4Q3U4B1 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
Ssbp4Q3U4B1 AC166341.8-201ENSMUST00000221267 108 ntBASIC0.7□□□□□ -2.3
Ssbp4Q3U4B1 Gm25629-201ENSMUST00000084001 107 ntBASIC0.7□□□□□ -2.3
Ssbp4Q3U4B1 Gm22770-201ENSMUST00000158368 67 ntBASIC0.69□□□□□ -2.3
Ssbp4Q3U4B1 Gm23853-201ENSMUST00000158375 104 ntBASIC0.69□□□□□ -2.3
Ssbp4Q3U4B1 Gm20386-201ENSMUST00000174010 132 ntBASIC0.69□□□□□ -2.3
Ssbp4Q3U4B1 Gm44458-201ENSMUST00000196594 143 ntBASIC0.69□□□□□ -2.3
Ssbp4Q3U4B1 Gm24099-201ENSMUST00000083384 107 ntBASIC0.69□□□□□ -2.3
Ssbp4Q3U4B1 Gm22786-201ENSMUST00000104086 122 ntBASIC0.68□□□□□ -2.3
Ssbp4Q3U4B1 Gm14884-201ENSMUST00000120456 196 ntBASIC0.68□□□□□ -2.3
Ssbp4Q3U4B1 Gm16265-201ENSMUST00000134558 108 ntBASIC0.68□□□□□ -2.3
Ssbp4Q3U4B1 Gm23917-201ENSMUST00000175256 98 ntBASIC0.68□□□□□ -2.3
Ssbp4Q3U4B1 Gm38113-201ENSMUST00000193704 201 ntBASIC0.68□□□□□ -2.3
Ssbp4Q3U4B1 Gm44602-201ENSMUST00000205948 132 ntBASIC0.68□□□□□ -2.3
Ssbp4Q3U4B1 Gm11694-201ENSMUST00000118637 159 ntBASIC0.67□□□□□ -2.3
Ssbp4Q3U4B1 Gm24290-201ENSMUST00000157634 96 ntBASIC0.67□□□□□ -2.3
Ssbp4Q3U4B1 Gm22706-201ENSMUST00000157907 112 ntBASIC0.67□□□□□ -2.3
Ssbp4Q3U4B1 Gm25600-201ENSMUST00000158357 106 ntBASIC0.67□□□□□ -2.3
Ssbp4Q3U4B1 Gm24129-201ENSMUST00000158537 97 ntBASIC0.67□□□□□ -2.3
Ssbp4Q3U4B1 Gm25693-201ENSMUST00000175443 85 ntBASIC0.67□□□□□ -2.3
Ssbp4Q3U4B1 DQ267101-201ENSMUST00000082562 73 ntBASIC0.67□□□□□ -2.3
Ssbp4Q3U4B1 Gm26062-201ENSMUST00000083379 107 ntBASIC0.67□□□□□ -2.3
Ssbp4Q3U4B1 Mir33-201ENSMUST00000083531 69 ntBASIC0.67□□□□□ -2.3
Ssbp4Q3U4B1 Mir344-201ENSMUST00000083634 95 ntBASIC0.67□□□□□ -2.3
Ssbp4Q3U4B1 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
Ssbp4Q3U4B1 Gm22689-201ENSMUST00000102452 110 ntBASIC0.66□□□□□ -2.3
Ssbp4Q3U4B1 Gm23482-201ENSMUST00000104172 122 ntBASIC0.66□□□□□ -2.3
Ssbp4Q3U4B1 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.66□□□□□ -2.3
Ssbp4Q3U4B1 Gm24399-201ENSMUST00000157869 74 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 194.8 ms