Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm23237-201ENSMUST00000104639 92 ntBASIC1.85□□□□□ -2.11
Col6a1Q04857 Gm26478-201ENSMUST00000122611 133 ntBASIC1.85□□□□□ -2.11
Col6a1Q04857 Gm24262-201ENSMUST00000157431 144 ntBASIC1.85□□□□□ -2.11
Col6a1Q04857 Gm22522-201ENSMUST00000158271 151 ntBASIC1.85□□□□□ -2.11
Col6a1Q04857 Gm24677-201ENSMUST00000158755 150 ntBASIC1.85□□□□□ -2.11
Col6a1Q04857 Gm23293-201ENSMUST00000082552 104 ntBASIC1.85□□□□□ -2.11
Col6a1Q04857 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Col6a1Q04857 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.84□□□□□ -2.11
Col6a1Q04857 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC1.84□□□□□ -2.11
Col6a1Q04857 Gm24728-201ENSMUST00000158226 125 ntBASIC1.84□□□□□ -2.11
Col6a1Q04857 Gm25958-201ENSMUST00000175114 71 ntBASIC1.84□□□□□ -2.11
Col6a1Q04857 Gm22929-201ENSMUST00000175517 107 ntBASIC1.84□□□□□ -2.11
Col6a1Q04857 Gm25936-201ENSMUST00000179952 114 ntBASIC1.84□□□□□ -2.11
Col6a1Q04857 Mir320-201ENSMUST00000083594 82 ntBASIC1.84□□□□□ -2.11
Col6a1Q04857 Gm25650-201ENSMUST00000083784 162 ntBASIC1.84□□□□□ -2.11
Col6a1Q04857 Mir544-201ENSMUST00000103813 78 ntBASIC1.83□□□□□ -2.12
Col6a1Q04857 Gm26301-201ENSMUST00000104813 95 ntBASIC1.83□□□□□ -2.12
Col6a1Q04857 Gm12469-201ENSMUST00000117623 207 ntBASIC1.83□□□□□ -2.12
Col6a1Q04857 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.83□□□□□ -2.12
Col6a1Q04857 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.83□□□□□ -2.12
Col6a1Q04857 Mir6962-201ENSMUST00000199512 63 ntBASIC1.83□□□□□ -2.12
Col6a1Q04857 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC1.83□□□□□ -2.12
Col6a1Q04857 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Col6a1Q04857 Gm25541-201ENSMUST00000116888 126 ntBASIC1.82□□□□□ -2.12
Col6a1Q04857 Gm23106-201ENSMUST00000157554 101 ntBASIC1.82□□□□□ -2.12
Col6a1Q04857 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC1.82□□□□□ -2.12
Col6a1Q04857 Gm25740-201ENSMUST00000180247 107 ntBASIC1.82□□□□□ -2.12
Col6a1Q04857 Gm43038-201ENSMUST00000202359 88 ntBASIC1.82□□□□□ -2.12
Col6a1Q04857 AC122335.1-201ENSMUST00000217587 175 ntBASIC1.82□□□□□ -2.12
Col6a1Q04857 Snord1a-201ENSMUST00000083160 74 ntBASIC1.82□□□□□ -2.12
Col6a1Q04857 Gm24342-201ENSMUST00000103907 104 ntBASIC1.81□□□□□ -2.12
Col6a1Q04857 Gm23482-201ENSMUST00000104172 122 ntBASIC1.81□□□□□ -2.12
Col6a1Q04857 Gm15115-201ENSMUST00000121145 264 ntBASIC1.81□□□□□ -2.12
Col6a1Q04857 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Col6a1Q04857 Mir6394-201ENSMUST00000184738 99 ntBASIC1.81□□□□□ -2.12
Col6a1Q04857 Gm28435-201ENSMUST00000185496 108 ntBASIC1.81□□□□□ -2.12
Col6a1Q04857 Gm29047-201ENSMUST00000189816 108 ntBASIC1.81□□□□□ -2.12
Col6a1Q04857 Gm44602-201ENSMUST00000205948 132 ntBASIC1.81□□□□□ -2.12
Col6a1Q04857 Gm25798-201ENSMUST00000082641 107 ntBASIC1.81□□□□□ -2.12
Col6a1Q04857 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
Col6a1Q04857 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.8□□□□□ -2.12
Col6a1Q04857 Gm25496-201ENSMUST00000104430 120 ntBASIC1.8□□□□□ -2.12
Col6a1Q04857 Gm23881-201ENSMUST00000116872 66 ntBASIC1.8□□□□□ -2.12
Col6a1Q04857 Gm23347-201ENSMUST00000083823 82 ntBASIC1.8□□□□□ -2.12
Col6a1Q04857 Gm24162-201ENSMUST00000093665 102 ntBASIC1.8□□□□□ -2.12
Col6a1Q04857 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.79□□□□□ -2.12
Col6a1Q04857 Mir653-201ENSMUST00000102402 85 ntBASIC1.79□□□□□ -2.12
Col6a1Q04857 Gm24183-201ENSMUST00000122572 93 ntBASIC1.79□□□□□ -2.12
Col6a1Q04857 Gm26181-201ENSMUST00000157687 106 ntBASIC1.79□□□□□ -2.12
Col6a1Q04857 Gm26038-201ENSMUST00000158151 106 ntBASIC1.79□□□□□ -2.12
Col6a1Q04857 Gm23761-201ENSMUST00000158347 104 ntBASIC1.79□□□□□ -2.12
Col6a1Q04857 Gm25901-201ENSMUST00000158494 130 ntBASIC1.79□□□□□ -2.12
Col6a1Q04857 Gm24495-201ENSMUST00000178575 79 ntBASIC1.79□□□□□ -2.12
Col6a1Q04857 Gm22253-201ENSMUST00000179870 79 ntBASIC1.79□□□□□ -2.12
Col6a1Q04857 Mir7059-201ENSMUST00000184825 59 ntBASIC1.79□□□□□ -2.12
Col6a1Q04857 Mir448-201ENSMUST00000083516 112 ntBASIC1.79□□□□□ -2.12
Col6a1Q04857 AC154506.4-201ENSMUST00000224898 3416 ntBASIC1.78□□□□□ -2.12
Col6a1Q04857 Gm25417-201ENSMUST00000104212 131 ntBASIC1.78□□□□□ -2.12
Col6a1Q04857 Gm24648-201ENSMUST00000157111 132 ntBASIC1.78□□□□□ -2.12
Col6a1Q04857 Gm24686-201ENSMUST00000157755 93 ntBASIC1.78□□□□□ -2.12
Col6a1Q04857 Mir7052-201ENSMUST00000184821 65 ntBASIC1.78□□□□□ -2.12
Col6a1Q04857 AC157602.1-201ENSMUST00000197446 105 ntBASIC1.78□□□□□ -2.12
Col6a1Q04857 Gm44469-201ENSMUST00000198558 79 ntBASIC1.78□□□□□ -2.12
Col6a1Q04857 Mir29a-201ENSMUST00000083676 88 ntBASIC1.78□□□□□ -2.12
Col6a1Q04857 Gm25322-201ENSMUST00000122556 104 ntBASIC1.77□□□□□ -2.13
Col6a1Q04857 Gm24154-201ENSMUST00000175261 130 ntBASIC1.77□□□□□ -2.13
Col6a1Q04857 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.77□□□□□ -2.13
Col6a1Q04857 Gm22809-201ENSMUST00000082743 156 ntBASIC1.77□□□□□ -2.13
Col6a1Q04857 Gm23203-201ENSMUST00000104374 107 ntBASIC1.76□□□□□ -2.13
Col6a1Q04857 Gm24988-201ENSMUST00000104460 121 ntBASIC1.76□□□□□ -2.13
Col6a1Q04857 Gm23336-201ENSMUST00000117023 123 ntBASIC1.76□□□□□ -2.13
Col6a1Q04857 Mir7675-201ENSMUST00000184262 58 ntBASIC1.76□□□□□ -2.13
Col6a1Q04857 Mir709-201ENSMUST00000102190 88 ntBASIC1.75□□□□□ -2.13
Col6a1Q04857 Gm24868-201ENSMUST00000157265 136 ntBASIC1.75□□□□□ -2.13
Col6a1Q04857 Gm23329-201ENSMUST00000157415 108 ntBASIC1.75□□□□□ -2.13
Col6a1Q04857 Gm24199-201ENSMUST00000157808 136 ntBASIC1.75□□□□□ -2.13
Col6a1Q04857 Gm24077-201ENSMUST00000158183 136 ntBASIC1.75□□□□□ -2.13
Col6a1Q04857 Gm22386-201ENSMUST00000158192 129 ntBASIC1.75□□□□□ -2.13
Col6a1Q04857 Gm24129-201ENSMUST00000158537 97 ntBASIC1.75□□□□□ -2.13
Col6a1Q04857 Mir3098-201ENSMUST00000175416 87 ntBASIC1.75□□□□□ -2.13
Col6a1Q04857 Mir1954-201ENSMUST00000175595 86 ntBASIC1.75□□□□□ -2.13
Col6a1Q04857 Gm28383-201ENSMUST00000187563 139 ntBASIC1.75□□□□□ -2.13
Col6a1Q04857 Gm44948-201ENSMUST00000209050 149 ntBASIC1.75□□□□□ -2.13
Col6a1Q04857 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Col6a1Q04857 Mir343-201ENSMUST00000102360 75 ntBASIC1.74□□□□□ -2.13
Col6a1Q04857 Gm22544-201ENSMUST00000104349 127 ntBASIC1.74□□□□□ -2.13
Col6a1Q04857 Mup-ps5-201ENSMUST00000118667 99 ntBASIC1.74□□□□□ -2.13
Col6a1Q04857 Gm25663-201ENSMUST00000157698 135 ntBASIC1.74□□□□□ -2.13
Col6a1Q04857 Gm22801-201ENSMUST00000175624 84 ntBASIC1.74□□□□□ -2.13
Col6a1Q04857 Gm24588-201ENSMUST00000116696 83 ntBASIC1.73□□□□□ -2.13
Col6a1Q04857 n-R5s70-201ENSMUST00000122650 116 ntBASIC1.73□□□□□ -2.13
Col6a1Q04857 Gm25056-201ENSMUST00000157372 62 ntBASIC1.73□□□□□ -2.13
Col6a1Q04857 Gm24064-201ENSMUST00000157486 106 ntBASIC1.73□□□□□ -2.13
Col6a1Q04857 Gm27297-201ENSMUST00000183395 105 ntBASIC1.73□□□□□ -2.13
Col6a1Q04857 Mir6985-201ENSMUST00000184641 61 ntBASIC1.73□□□□□ -2.13
Col6a1Q04857 Mir509-201ENSMUST00000196089 75 ntBASIC1.73□□□□□ -2.13
Col6a1Q04857 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.73□□□□□ -2.13
Col6a1Q04857 Gm26207-201ENSMUST00000082909 104 ntBASIC1.73□□□□□ -2.13
Col6a1Q04857 Mir1197-201ENSMUST00000117037 120 ntBASIC1.72□□□□□ -2.13
Col6a1Q04857 Gm11333-201ENSMUST00000119479 148 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 184.4 ms