Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Trbv25-201ENSMUST00000194700 273 ntBASIC0.72□□□□□ -2.29
NcanP55066 Mir695-201ENSMUST00000102261 109 ntBASIC0.71□□□□□ -2.3
NcanP55066 Gm23881-201ENSMUST00000116872 66 ntBASIC0.71□□□□□ -2.3
NcanP55066 Gm24894-201ENSMUST00000122744 118 ntBASIC0.71□□□□□ -2.3
NcanP55066 Mir6364-201ENSMUST00000183396 86 ntBASIC0.71□□□□□ -2.3
NcanP55066 Mir21c-201ENSMUST00000184910 78 ntBASIC0.71□□□□□ -2.3
NcanP55066 Gm44211-201ENSMUST00000204867 145 ntBASIC0.71□□□□□ -2.3
NcanP55066 Mir500-201ENSMUST00000093600 92 ntBASIC0.71□□□□□ -2.3
NcanP55066 Gm25544-201ENSMUST00000122676 120 ntBASIC0.7□□□□□ -2.3
NcanP55066 Gm24649-201ENSMUST00000157106 134 ntBASIC0.7□□□□□ -2.3
NcanP55066 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
NcanP55066 Gm24527-201ENSMUST00000082920 107 ntBASIC0.7□□□□□ -2.3
NcanP55066 Gm23507-201ENSMUST00000083078 107 ntBASIC0.7□□□□□ -2.3
NcanP55066 Gm26338-201ENSMUST00000102372 110 ntBASIC0.69□□□□□ -2.3
NcanP55066 Gm23654-201ENSMUST00000116758 126 ntBASIC0.69□□□□□ -2.3
NcanP55066 Gm25680-201ENSMUST00000116917 126 ntBASIC0.69□□□□□ -2.3
NcanP55066 Gm22635-201ENSMUST00000116962 126 ntBASIC0.69□□□□□ -2.3
NcanP55066 Gm22638-201ENSMUST00000179674 107 ntBASIC0.69□□□□□ -2.3
NcanP55066 Gm36956-201ENSMUST00000193830 214 ntBASIC0.69□□□□□ -2.3
NcanP55066 AC124687.1-201ENSMUST00000221868 189 ntBASIC0.69□□□□□ -2.3
NcanP55066 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
NcanP55066 Snord69-201ENSMUST00000104024 80 ntBASIC0.68□□□□□ -2.3
NcanP55066 Snord78-201ENSMUST00000104032 66 ntBASIC0.68□□□□□ -2.3
NcanP55066 Gm22786-201ENSMUST00000104086 122 ntBASIC0.68□□□□□ -2.3
NcanP55066 Mir1191-201ENSMUST00000116883 120 ntBASIC0.68□□□□□ -2.3
NcanP55066 Gm12086-201ENSMUST00000120863 228 ntBASIC0.68□□□□□ -2.3
NcanP55066 Gm22962-201ENSMUST00000157962 73 ntBASIC0.68□□□□□ -2.3
NcanP55066 Gm22089-201ENSMUST00000158336 102 ntBASIC0.68□□□□□ -2.3
NcanP55066 Gm23853-201ENSMUST00000158375 104 ntBASIC0.68□□□□□ -2.3
NcanP55066 Gm37796-201ENSMUST00000195327 134 ntBASIC0.68□□□□□ -2.3
NcanP55066 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.68□□□□□ -2.3
NcanP55066 Gm22753-201ENSMUST00000083657 107 ntBASIC0.68□□□□□ -2.3
NcanP55066 Gm24586-201ENSMUST00000116695 89 ntBASIC0.67□□□□□ -2.3
NcanP55066 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.67□□□□□ -2.3
NcanP55066 Gm23601-201ENSMUST00000157259 131 ntBASIC0.67□□□□□ -2.3
NcanP55066 Gm24549-201ENSMUST00000158647 139 ntBASIC0.67□□□□□ -2.3
NcanP55066 Gm24223-201ENSMUST00000158827 90 ntBASIC0.67□□□□□ -2.3
NcanP55066 Gm10548-202ENSMUST00000165672 272 ntBASIC0.67□□□□□ -2.3
NcanP55066 Gm22466-201ENSMUST00000175278 69 ntBASIC0.67□□□□□ -2.3
NcanP55066 Gm26236-201ENSMUST00000175536 137 ntBASIC0.67□□□□□ -2.3
NcanP55066 Gm25646-201ENSMUST00000178527 79 ntBASIC0.67□□□□□ -2.3
NcanP55066 Gm28270-201ENSMUST00000188550 109 ntBASIC0.67□□□□□ -2.3
NcanP55066 Gm28328-201ENSMUST00000188869 109 ntBASIC0.67□□□□□ -2.3
NcanP55066 Mir362-201ENSMUST00000093592 65 ntBASIC0.67□□□□□ -2.3
NcanP55066 Gm22031-201ENSMUST00000116945 126 ntBASIC0.66□□□□□ -2.3
NcanP55066 Gm26290-201ENSMUST00000158891 145 ntBASIC0.66□□□□□ -2.3
NcanP55066 Gm26398-201ENSMUST00000179015 127 ntBASIC0.66□□□□□ -2.3
NcanP55066 Gm44488-201ENSMUST00000199467 119 ntBASIC0.66□□□□□ -2.3
NcanP55066 Gm25753-201ENSMUST00000116792 121 ntBASIC0.65□□□□□ -2.31
NcanP55066 Gm12469-201ENSMUST00000117623 207 ntBASIC0.65□□□□□ -2.31
NcanP55066 Gm23857-201ENSMUST00000158379 111 ntBASIC0.65□□□□□ -2.31
NcanP55066 Gm24678-201ENSMUST00000158756 104 ntBASIC0.65□□□□□ -2.31
NcanP55066 Gm44469-201ENSMUST00000198558 79 ntBASIC0.65□□□□□ -2.31
NcanP55066 Gm45429-201ENSMUST00000209527 172 ntBASIC0.65□□□□□ -2.31
NcanP55066 Gm22509-201ENSMUST00000082775 107 ntBASIC0.65□□□□□ -2.31
NcanP55066 Gm26054-201ENSMUST00000083037 107 ntBASIC0.65□□□□□ -2.31
NcanP55066 Gm25138-201ENSMUST00000083248 136 ntBASIC0.65□□□□□ -2.31
NcanP55066 Gm24492-201ENSMUST00000083798 107 ntBASIC0.65□□□□□ -2.31
NcanP55066 Gm23203-201ENSMUST00000104374 107 ntBASIC0.64□□□□□ -2.31
NcanP55066 Gm23351-201ENSMUST00000158427 125 ntBASIC0.64□□□□□ -2.31
NcanP55066 Gm24500-201ENSMUST00000158447 124 ntBASIC0.64□□□□□ -2.31
NcanP55066 Gm23416-201ENSMUST00000175520 95 ntBASIC0.64□□□□□ -2.31
NcanP55066 Gm28435-201ENSMUST00000185496 108 ntBASIC0.64□□□□□ -2.31
NcanP55066 Gm43324-201ENSMUST00000197482 289 ntBASIC0.64□□□□□ -2.31
NcanP55066 Gm25899-201ENSMUST00000082672 141 ntBASIC0.64□□□□□ -2.31
NcanP55066 Gm22055-201ENSMUST00000083388 107 ntBASIC0.64□□□□□ -2.31
NcanP55066 Mir369-201ENSMUST00000083627 79 ntBASIC0.64□□□□□ -2.31
NcanP55066 Snord33-201ENSMUST00000083694 84 ntBASIC0.64□□□□□ -2.31
NcanP55066 Gm22828-201ENSMUST00000083768 107 ntBASIC0.64□□□□□ -2.31
NcanP55066 Mir466-201ENSMUST00000093591 73 ntBASIC0.64□□□□□ -2.31
NcanP55066 Mir1a-1-201ENSMUST00000093635 77 ntBASIC0.64□□□□□ -2.31
NcanP55066 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.63□□□□□ -2.31
NcanP55066 Gm24947-201ENSMUST00000158334 110 ntBASIC0.63□□□□□ -2.31
NcanP55066 Gm25978-201ENSMUST00000158698 90 ntBASIC0.63□□□□□ -2.31
NcanP55066 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.63□□□□□ -2.31
NcanP55066 Gm23917-201ENSMUST00000175256 98 ntBASIC0.63□□□□□ -2.31
NcanP55066 Gm27993-201ENSMUST00000184362 85 ntBASIC0.63□□□□□ -2.31
NcanP55066 Gm24148-201ENSMUST00000082762 80 ntBASIC0.63□□□□□ -2.31
NcanP55066 Mir802-201ENSMUST00000103258 97 ntBASIC0.62□□□□□ -2.31
NcanP55066 Mir764-201ENSMUST00000103259 108 ntBASIC0.62□□□□□ -2.31
NcanP55066 Gm23672-201ENSMUST00000157471 107 ntBASIC0.62□□□□□ -2.31
NcanP55066 Gm24129-201ENSMUST00000158537 97 ntBASIC0.62□□□□□ -2.31
NcanP55066 Gm26158-201ENSMUST00000158973 119 ntBASIC0.62□□□□□ -2.31
NcanP55066 Gm42844-201ENSMUST00000200355 112 ntBASIC0.62□□□□□ -2.31
NcanP55066 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.62□□□□□ -2.31
NcanP55066 Gm25684-201ENSMUST00000083941 107 ntBASIC0.62□□□□□ -2.31
NcanP55066 Gm25089-201ENSMUST00000102015 79 ntBASIC0.61□□□□□ -2.31
NcanP55066 Gm24468-201ENSMUST00000104489 104 ntBASIC0.61□□□□□ -2.31
NcanP55066 Gm23986-201ENSMUST00000157144 63 ntBASIC0.61□□□□□ -2.31
NcanP55066 Gm23384-201ENSMUST00000158593 103 ntBASIC0.61□□□□□ -2.31
NcanP55066 Gm25840-201ENSMUST00000177821 79 ntBASIC0.61□□□□□ -2.31
NcanP55066 Gm24952-201ENSMUST00000177909 79 ntBASIC0.61□□□□□ -2.31
NcanP55066 Gm23682-201ENSMUST00000178146 79 ntBASIC0.61□□□□□ -2.31
NcanP55066 Gm24652-201ENSMUST00000178223 79 ntBASIC0.61□□□□□ -2.31
NcanP55066 Gm22629-201ENSMUST00000178272 79 ntBASIC0.61□□□□□ -2.31
NcanP55066 Gm24021-201ENSMUST00000178435 79 ntBASIC0.61□□□□□ -2.31
NcanP55066 Gm22274-201ENSMUST00000178441 79 ntBASIC0.61□□□□□ -2.31
NcanP55066 Gm22050-201ENSMUST00000178442 79 ntBASIC0.61□□□□□ -2.31
NcanP55066 Gm22070-201ENSMUST00000178475 107 ntBASIC0.61□□□□□ -2.31
NcanP55066 Gm23688-201ENSMUST00000178502 79 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 166 ms