Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.57□□□□□ -2.16
Rfx1P48377 Gm22149-201ENSMUST00000104442 136 ntBASIC1.57□□□□□ -2.16
Rfx1P48377 Snord13-201ENSMUST00000157627 104 ntBASIC1.57□□□□□ -2.16
Rfx1P48377 Gm26089-201ENSMUST00000157898 107 ntBASIC1.57□□□□□ -2.16
Rfx1P48377 Gm22770-201ENSMUST00000158368 67 ntBASIC1.57□□□□□ -2.16
Rfx1P48377 Gm27297-201ENSMUST00000183395 105 ntBASIC1.57□□□□□ -2.16
Rfx1P48377 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Rfx1P48377 Gm23790-201ENSMUST00000083013 107 ntBASIC1.57□□□□□ -2.16
Rfx1P48377 Gm23122-201ENSMUST00000157645 103 ntBASIC1.56□□□□□ -2.16
Rfx1P48377 Gm24549-201ENSMUST00000158647 139 ntBASIC1.56□□□□□ -2.16
Rfx1P48377 Gm22663-201ENSMUST00000158721 102 ntBASIC1.56□□□□□ -2.16
Rfx1P48377 Mir7665-201ENSMUST00000184907 63 ntBASIC1.56□□□□□ -2.16
Rfx1P48377 AC116319.1-201ENSMUST00000227765 222 ntBASIC1.56□□□□□ -2.16
Rfx1P48377 mt-Tn-201ENSMUST00000082399 71 ntBASIC1.56□□□□□ -2.16
Rfx1P48377 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.56□□□□□ -2.16
Rfx1P48377 Gm24865-201ENSMUST00000103246 96 ntBASIC1.55□□□□□ -2.16
Rfx1P48377 Gm22030-201ENSMUST00000116942 63 ntBASIC1.55□□□□□ -2.16
Rfx1P48377 Gm22212-201ENSMUST00000158096 106 ntBASIC1.55□□□□□ -2.16
Rfx1P48377 Gm25974-201ENSMUST00000158701 94 ntBASIC1.55□□□□□ -2.16
Rfx1P48377 Gm24221-201ENSMUST00000158833 313 ntBASIC1.55□□□□□ -2.16
Rfx1P48377 Gm27894-201ENSMUST00000184177 92 ntBASIC1.55□□□□□ -2.16
Rfx1P48377 Gm45197-201ENSMUST00000205288 151 ntBASIC1.55□□□□□ -2.16
Rfx1P48377 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC1.55□□□□□ -2.16
Rfx1P48377 Gm25022-201ENSMUST00000102205 83 ntBASIC1.54□□□□□ -2.16
Rfx1P48377 Gm22672-201ENSMUST00000104414 134 ntBASIC1.54□□□□□ -2.16
Rfx1P48377 Gm6272-201ENSMUST00000121256 171 ntBASIC1.54□□□□□ -2.16
Rfx1P48377 Gm23661-201ENSMUST00000122630 87 ntBASIC1.54□□□□□ -2.16
Rfx1P48377 Mir3079-201ENSMUST00000175428 90 ntBASIC1.54□□□□□ -2.16
Rfx1P48377 Mir467a-6-201ENSMUST00000177790 83 ntBASIC1.54□□□□□ -2.16
Rfx1P48377 Mir467a-3-201ENSMUST00000178082 83 ntBASIC1.54□□□□□ -2.16
Rfx1P48377 Mir467a-7-201ENSMUST00000178635 83 ntBASIC1.54□□□□□ -2.16
Rfx1P48377 Mir467a-10-201ENSMUST00000179320 83 ntBASIC1.54□□□□□ -2.16
Rfx1P48377 Mir467a-5-201ENSMUST00000179352 83 ntBASIC1.54□□□□□ -2.16
Rfx1P48377 Mir467a-2-201ENSMUST00000179447 83 ntBASIC1.54□□□□□ -2.16
Rfx1P48377 Mir467a-9-201ENSMUST00000179752 83 ntBASIC1.54□□□□□ -2.16
Rfx1P48377 Mir467a-4-201ENSMUST00000179923 83 ntBASIC1.54□□□□□ -2.16
Rfx1P48377 Mir467a-8-201ENSMUST00000180070 83 ntBASIC1.54□□□□□ -2.16
Rfx1P48377 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Rfx1P48377 Gm25166-201ENSMUST00000158909 111 ntBASIC1.53□□□□□ -2.16
Rfx1P48377 Mir3968-201ENSMUST00000175355 100 ntBASIC1.53□□□□□ -2.16
Rfx1P48377 Gm43911-201ENSMUST00000203097 76 ntBASIC1.53□□□□□ -2.16
Rfx1P48377 Mir211-201ENSMUST00000083651 106 ntBASIC1.53□□□□□ -2.16
Rfx1P48377 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1.52□□□□□ -2.17
Rfx1P48377 Gm24290-201ENSMUST00000157634 96 ntBASIC1.52□□□□□ -2.17
Rfx1P48377 Gm24009-201ENSMUST00000157734 93 ntBASIC1.52□□□□□ -2.17
Rfx1P48377 Gm22485-201ENSMUST00000157990 109 ntBASIC1.52□□□□□ -2.17
Rfx1P48377 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
Rfx1P48377 Gm22559-201ENSMUST00000157329 134 ntBASIC1.51□□□□□ -2.17
Rfx1P48377 Gm25693-201ENSMUST00000175443 85 ntBASIC1.51□□□□□ -2.17
Rfx1P48377 Gm27645-201ENSMUST00000183348 77 ntBASIC1.51□□□□□ -2.17
Rfx1P48377 Mir8119-201ENSMUST00000183371 129 ntBASIC1.51□□□□□ -2.17
Rfx1P48377 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.51□□□□□ -2.17
Rfx1P48377 Gm25635-201ENSMUST00000082675 131 ntBASIC1.51□□□□□ -2.17
Rfx1P48377 Gm25274-201ENSMUST00000104296 135 ntBASIC1.5□□□□□ -2.17
Rfx1P48377 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.5□□□□□ -2.17
Rfx1P48377 Gm22541-201ENSMUST00000158165 127 ntBASIC1.5□□□□□ -2.17
Rfx1P48377 Gm23261-201ENSMUST00000158316 136 ntBASIC1.5□□□□□ -2.17
Rfx1P48377 Gm23853-201ENSMUST00000158375 104 ntBASIC1.5□□□□□ -2.17
Rfx1P48377 Mir6237-201ENSMUST00000183808 91 ntBASIC1.5□□□□□ -2.17
Rfx1P48377 Gm26082-201ENSMUST00000104070 127 ntBASIC1.49□□□□□ -2.17
Rfx1P48377 Gm27711-201ENSMUST00000183802 118 ntBASIC1.49□□□□□ -2.17
Rfx1P48377 Gm44490-201ENSMUST00000198566 127 ntBASIC1.49□□□□□ -2.17
Rfx1P48377 Gm14400-201ENSMUST00000117234 2135 ntBASIC1.49□□□□□ -2.17
Rfx1P48377 Gm22673-201ENSMUST00000104415 131 ntBASIC1.48□□□□□ -2.17
Rfx1P48377 Gm12432-201ENSMUST00000119540 186 ntBASIC1.48□□□□□ -2.17
Rfx1P48377 Gm23349-201ENSMUST00000158432 98 ntBASIC1.48□□□□□ -2.17
Rfx1P48377 Gm44932-201ENSMUST00000206799 121 ntBASIC1.48□□□□□ -2.17
Rfx1P48377 Gm22074-201ENSMUST00000158595 113 ntBASIC1.47□□□□□ -2.17
Rfx1P48377 Mir15a-201ENSMUST00000175266 84 ntBASIC1.47□□□□□ -2.17
Rfx1P48377 Gm23369-201ENSMUST00000175406 105 ntBASIC1.47□□□□□ -2.17
Rfx1P48377 Gm24208-201ENSMUST00000082783 135 ntBASIC1.47□□□□□ -2.17
Rfx1P48377 Mir377-201ENSMUST00000083504 68 ntBASIC1.47□□□□□ -2.17
Rfx1P48377 Gm23336-201ENSMUST00000117023 123 ntBASIC1.46□□□□□ -2.18
Rfx1P48377 Gm24686-201ENSMUST00000157755 93 ntBASIC1.46□□□□□ -2.18
Rfx1P48377 Mir33-201ENSMUST00000083531 69 ntBASIC1.46□□□□□ -2.18
Rfx1P48377 Gm24648-201ENSMUST00000157111 132 ntBASIC1.45□□□□□ -2.18
Rfx1P48377 Gm23038-201ENSMUST00000083873 104 ntBASIC1.45□□□□□ -2.18
Rfx1P48377 Mup-ps5-201ENSMUST00000118667 99 ntBASIC1.44□□□□□ -2.18
Rfx1P48377 Gm25449-201ENSMUST00000179389 79 ntBASIC1.44□□□□□ -2.18
Rfx1P48377 AC122327.1-201ENSMUST00000220778 108 ntBASIC1.44□□□□□ -2.18
Rfx1P48377 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.44□□□□□ -2.18
Rfx1P48377 Gm22950-201ENSMUST00000082776 107 ntBASIC1.44□□□□□ -2.18
Rfx1P48377 Mir101a-201ENSMUST00000083517 83 ntBASIC1.44□□□□□ -2.18
Rfx1P48377 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Rfx1P48377 Gm22786-201ENSMUST00000104086 122 ntBASIC1.43□□□□□ -2.18
Rfx1P48377 Gm23989-201ENSMUST00000117030 66 ntBASIC1.43□□□□□ -2.18
Rfx1P48377 Mir100-201ENSMUST00000175270 80 ntBASIC1.43□□□□□ -2.18
Rfx1P48377 Gm44483-201ENSMUST00000197203 97 ntBASIC1.43□□□□□ -2.18
Rfx1P48377 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Rfx1P48377 Mir216b-201ENSMUST00000102363 86 ntBASIC1.42□□□□□ -2.18
Rfx1P48377 Mir7052-201ENSMUST00000184821 65 ntBASIC1.42□□□□□ -2.18
Rfx1P48377 Gm38295-201ENSMUST00000191951 151 ntBASIC1.42□□□□□ -2.18
Rfx1P48377 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Rfx1P48377 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.42□□□□□ -2.18
Rfx1P48377 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.41□□□□□ -2.18
Rfx1P48377 Gm26425-201ENSMUST00000122529 82 ntBASIC1.41□□□□□ -2.18
Rfx1P48377 Mir3098-201ENSMUST00000175416 87 ntBASIC1.41□□□□□ -2.18
Rfx1P48377 Mir7063-201ENSMUST00000184158 91 ntBASIC1.41□□□□□ -2.18
Rfx1P48377 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Rfx1P48377 Scarna3a-201ENSMUST00000158911 140 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 143.6 ms