Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm22113-201ENSMUST00000158343 104 ntBASIC-2.22□□□□□ -2.76
HttP42859 Gm24773-201ENSMUST00000158513 99 ntBASIC-2.22□□□□□ -2.76
HttP42859 Gm24577-201ENSMUST00000158580 63 ntBASIC-2.22□□□□□ -2.76
HttP42859 Gm25451-201ENSMUST00000177832 121 ntBASIC-2.22□□□□□ -2.76
HttP42859 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC-2.22□□□□□ -2.77
HttP42859 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC-2.22□□□□□ -2.77
HttP42859 Gm24762-201ENSMUST00000083689 104 ntBASIC-2.22□□□□□ -2.77
HttP42859 Gm23955-201ENSMUST00000157214 100 ntBASIC-2.23□□□□□ -2.77
HttP42859 Gm22406-201ENSMUST00000174923 93 ntBASIC-2.23□□□□□ -2.77
HttP42859 Gm25670-201ENSMUST00000178423 107 ntBASIC-2.23□□□□□ -2.77
HttP42859 Gm24292-201ENSMUST00000082888 107 ntBASIC-2.23□□□□□ -2.77
HttP42859 Mir1912-201ENSMUST00000175298 87 ntBASIC-2.23□□□□□ -2.77
HttP42859 Mir7673-201ENSMUST00000184567 64 ntBASIC-2.23□□□□□ -2.77
HttP42859 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC-2.23□□□□□ -2.77
HttP42859 Gm16356-201ENSMUST00000143300 169 ntBASIC-2.24□□□□□ -2.77
HttP42859 AC147101.1-201ENSMUST00000217964 312 ntBASIC-2.24□□□□□ -2.77
HttP42859 Gm23981-201ENSMUST00000157136 106 ntBASIC-2.24□□□□□ -2.77
HttP42859 AC132437.1-201ENSMUST00000218308 320 ntBASIC-2.24□□□□□ -2.77
HttP42859 Gm23412-201ENSMUST00000083017 107 ntBASIC-2.24□□□□□ -2.77
HttP42859 Gm25793-201ENSMUST00000083287 107 ntBASIC-2.24□□□□□ -2.77
HttP42859 Mir3071-201ENSMUST00000093621 80 ntBASIC-2.24□□□□□ -2.77
HttP42859 Snora19-201ENSMUST00000082962 132 ntBASIC-2.25□□□□□ -2.77
HttP42859 Gm23658-201ENSMUST00000083233 132 ntBASIC-2.25□□□□□ -2.77
HttP42859 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-2.26□□□□□ -2.77
HttP42859 AC120394.1-201ENSMUST00000217153 351 ntBASIC-2.26□□□□□ -2.77
HttP42859 Mir3473a-201ENSMUST00000175011 78 ntBASIC-2.26□□□□□ -2.77
HttP42859 Gm27942-201ENSMUST00000184669 101 ntBASIC-2.26□□□□□ -2.77
HttP42859 Gm44563-201ENSMUST00000207958 178 ntBASIC-2.26□□□□□ -2.77
HttP42859 Gm22828-201ENSMUST00000083768 107 ntBASIC-2.26□□□□□ -2.77
HttP42859 Gm22451-201ENSMUST00000122803 151 ntBASIC-2.27□□□□□ -2.77
HttP42859 Gm23817-201ENSMUST00000158449 104 ntBASIC-2.27□□□□□ -2.77
HttP42859 AC154213.2-201ENSMUST00000227138 187 ntBASIC-2.27□□□□□ -2.77
HttP42859 Gm6897-201ENSMUST00000117714 138 ntBASIC-2.28□□□□□ -2.77
HttP42859 Gm14758-201ENSMUST00000119104 138 ntBASIC-2.28□□□□□ -2.77
HttP42859 Gm24080-201ENSMUST00000175178 232 ntBASIC-2.28□□□□□ -2.77
HttP42859 Gm23730-201ENSMUST00000083236 107 ntBASIC-2.28□□□□□ -2.77
HttP42859 Gm22229-201ENSMUST00000082987 108 ntBASIC-2.28□□□□□ -2.77
HttP42859 Gm23607-201ENSMUST00000104550 126 ntBASIC-2.28□□□□□ -2.78
HttP42859 Mir466b-3-201ENSMUST00000103806 81 ntBASIC-2.29□□□□□ -2.78
HttP42859 Gm23080-201ENSMUST00000157846 103 ntBASIC-2.29□□□□□ -2.78
HttP42859 Gm24453-201ENSMUST00000083346 76 ntBASIC-2.29□□□□□ -2.78
HttP42859 Gm24374-201ENSMUST00000104394 106 ntBASIC-2.29□□□□□ -2.78
HttP42859 Mir466n-201ENSMUST00000104798 94 ntBASIC-2.29□□□□□ -2.78
HttP42859 Gm23173-201ENSMUST00000157161 160 ntBASIC-2.29□□□□□ -2.78
HttP42859 Gm24111-201ENSMUST00000175491 97 ntBASIC-2.29□□□□□ -2.78
HttP42859 AC124739.2-201ENSMUST00000222201 109 ntBASIC-2.29□□□□□ -2.78
HttP42859 AC156790.3-201ENSMUST00000226200 254 ntBASIC-2.29□□□□□ -2.78
HttP42859 Mir9-2-201ENSMUST00000083490 72 ntBASIC-2.29□□□□□ -2.78
HttP42859 Gm23306-201ENSMUST00000179058 105 ntBASIC-2.3□□□□□ -2.78
HttP42859 Mir376a-201ENSMUST00000197584 68 ntBASIC-2.3□□□□□ -2.78
HttP42859 AC102369.1-201ENSMUST00000218415 373 ntBASIC-2.3□□□□□ -2.78
HttP42859 Gm25899-201ENSMUST00000082672 141 ntBASIC-2.3□□□□□ -2.78
HttP42859 Mir5619-201ENSMUST00000176065 61 ntBASIC-2.31□□□□□ -2.78
HttP42859 Gm42594-201ENSMUST00000199511 246 ntBASIC-2.31□□□□□ -2.78
HttP42859 Gm44923-201ENSMUST00000206673 85 ntBASIC-2.31□□□□□ -2.78
HttP42859 Gm23142-201ENSMUST00000101848 105 ntBASIC-2.31□□□□□ -2.78
HttP42859 Gm26240-201ENSMUST00000101893 105 ntBASIC-2.31□□□□□ -2.78
HttP42859 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC-2.31□□□□□ -2.78
HttP42859 Gm22708-201ENSMUST00000158987 103 ntBASIC-2.31□□□□□ -2.78
HttP42859 Gm22851-201ENSMUST00000178741 94 ntBASIC-2.31□□□□□ -2.78
HttP42859 Gm25074-201ENSMUST00000178782 94 ntBASIC-2.31□□□□□ -2.78
HttP42859 Gm25618-201ENSMUST00000179484 107 ntBASIC-2.31□□□□□ -2.78
HttP42859 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC-2.31□□□□□ -2.78
HttP42859 Gm44959-201ENSMUST00000209127 231 ntBASIC-2.31□□□□□ -2.78
HttP42859 Gm26482-201ENSMUST00000158015 62 ntBASIC-2.32□□□□□ -2.78
HttP42859 Gm20462-201ENSMUST00000172623 408 ntBASIC-2.32□□□□□ -2.78
HttP42859 Gm14567-201ENSMUST00000117155 174 ntBASIC-2.32□□□□□ -2.78
HttP42859 Gm25010-201ENSMUST00000158403 65 ntBASIC-2.32□□□□□ -2.78
HttP42859 Gm29513-201ENSMUST00000185741 202 ntBASIC-2.33□□□□□ -2.78
HttP42859 Gm29665-201ENSMUST00000191457 528 ntBASIC-2.33□□□□□ -2.78
HttP42859 Gm26107-201ENSMUST00000083972 107 ntBASIC-2.33□□□□□ -2.78
HttP42859 Snord90-201ENSMUST00000104568 111 ntBASIC-2.33□□□□□ -2.78
HttP42859 Mir669g-201ENSMUST00000116809 123 ntBASIC-2.33□□□□□ -2.78
HttP42859 Gm24673-201ENSMUST00000116948 124 ntBASIC-2.33□□□□□ -2.78
HttP42859 Gm26426-201ENSMUST00000177866 123 ntBASIC-2.33□□□□□ -2.78
HttP42859 Gm23108-201ENSMUST00000178295 124 ntBASIC-2.33□□□□□ -2.78
HttP42859 Gm26060-201ENSMUST00000180094 123 ntBASIC-2.33□□□□□ -2.78
HttP42859 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC-2.33□□□□□ -2.78
HttP42859 Gm25615-201ENSMUST00000177836 94 ntBASIC-2.34□□□□□ -2.78
HttP42859 Gm22296-201ENSMUST00000083310 103 ntBASIC-2.34□□□□□ -2.78
HttP42859 Gm22197-201ENSMUST00000116866 58 ntBASIC-2.34□□□□□ -2.78
HttP42859 Gm25158-201ENSMUST00000177681 121 ntBASIC-2.34□□□□□ -2.78
HttP42859 Gm26229-201ENSMUST00000179699 121 ntBASIC-2.34□□□□□ -2.78
HttP42859 Mir539-201ENSMUST00000102109 74 ntBASIC-2.35□□□□□ -2.78
HttP42859 Mir764-201ENSMUST00000103259 108 ntBASIC-2.35□□□□□ -2.78
HttP42859 Gm27715-201ENSMUST00000184714 260 ntBASIC-2.35□□□□□ -2.78
HttP42859 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC-2.35□□□□□ -2.78
HttP42859 Gm26293-201ENSMUST00000104170 84 ntBASIC-2.35□□□□□ -2.79
HttP42859 Gm26402-201ENSMUST00000158499 113 ntBASIC-2.35□□□□□ -2.79
HttP42859 Gm23619-201ENSMUST00000178411 94 ntBASIC-2.35□□□□□ -2.79
HttP42859 Gm25474-201ENSMUST00000179052 94 ntBASIC-2.35□□□□□ -2.79
HttP42859 Gm22047-201ENSMUST00000179176 94 ntBASIC-2.35□□□□□ -2.79
HttP42859 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC-2.35□□□□□ -2.79
HttP42859 Gm23625-201ENSMUST00000082457 100 ntBASIC-2.35□□□□□ -2.79
HttP42859 Gm22286-201ENSMUST00000179708 107 ntBASIC-2.35□□□□□ -2.79
HttP42859 Mir488-201ENSMUST00000093595 109 ntBASIC-2.35□□□□□ -2.79
HttP42859 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC-2.35□□□□□ -2.79
HttP42859 Mir3473c-201ENSMUST00000175262 81 ntBASIC-2.36□□□□□ -2.79
HttP42859 Snora15-201ENSMUST00000177461 131 ntBASIC-2.36□□□□□ -2.79
HttP42859 Mir741-201ENSMUST00000103931 71 ntBASIC-2.36□□□□□ -2.79
Retrieved 100 of 76,532 protein–RNA pairs in 190.7 ms