Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm24718-201ENSMUST00000157521 136 ntBASIC0.08□□□□□ -2.4
Traf1P39428 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.08□□□□□ -2.4
Traf1P39428 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC0.08□□□□□ -2.4
Traf1P39428 Gm24449-201ENSMUST00000083985 106 ntBASIC0.08□□□□□ -2.4
Traf1P39428 Mir1a-1-201ENSMUST00000093635 77 ntBASIC0.08□□□□□ -2.4
Traf1P39428 Mir669f-201ENSMUST00000103850 121 ntBASIC0.07□□□□□ -2.4
Traf1P39428 Gm25091-201ENSMUST00000103997 71 ntBASIC0.07□□□□□ -2.4
Traf1P39428 Gm26018-201ENSMUST00000104406 128 ntBASIC0.07□□□□□ -2.4
Traf1P39428 Mir3089-201ENSMUST00000175350 84 ntBASIC0.07□□□□□ -2.4
Traf1P39428 Mir8107-201ENSMUST00000184024 117 ntBASIC0.07□□□□□ -2.4
Traf1P39428 Gm22981-201ENSMUST00000082611 75 ntBASIC0.07□□□□□ -2.4
Traf1P39428 Gm26421-201ENSMUST00000104279 132 ntBASIC0.06□□□□□ -2.4
Traf1P39428 Gm12013-201ENSMUST00000121971 155 ntBASIC0.06□□□□□ -2.4
Traf1P39428 Gm25056-201ENSMUST00000157372 62 ntBASIC0.06□□□□□ -2.4
Traf1P39428 Gm24717-201ENSMUST00000157522 124 ntBASIC0.06□□□□□ -2.4
Traf1P39428 Gm26084-201ENSMUST00000157903 104 ntBASIC0.06□□□□□ -2.4
Traf1P39428 Gm23278-201ENSMUST00000157911 143 ntBASIC0.06□□□□□ -2.4
Traf1P39428 Gm25367-201ENSMUST00000158846 106 ntBASIC0.06□□□□□ -2.4
Traf1P39428 Gm44327-201ENSMUST00000200068 117 ntBASIC0.06□□□□□ -2.4
Traf1P39428 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC0.06□□□□□ -2.4
Traf1P39428 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC0.06□□□□□ -2.4
Traf1P39428 Gm25006-201ENSMUST00000083813 107 ntBASIC0.06□□□□□ -2.4
Traf1P39428 Gm22349-201ENSMUST00000157864 107 ntBASIC0.05□□□□□ -2.4
Traf1P39428 Gm23351-201ENSMUST00000158427 125 ntBASIC0.05□□□□□ -2.4
Traf1P39428 Gm45197-201ENSMUST00000205288 151 ntBASIC0.05□□□□□ -2.4
Traf1P39428 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
Traf1P39428 Mir18-201ENSMUST00000083469 96 ntBASIC0.05□□□□□ -2.4
Traf1P39428 Gm22772-201ENSMUST00000104451 121 ntBASIC0.04□□□□□ -2.4
Traf1P39428 Gm23020-201ENSMUST00000158766 253 ntBASIC0.04□□□□□ -2.4
Traf1P39428 Gm27297-201ENSMUST00000183395 105 ntBASIC0.04□□□□□ -2.4
Traf1P39428 Gm45492-201ENSMUST00000211611 288 ntBASIC0.04□□□□□ -2.4
Traf1P39428 mt-Ts2-201ENSMUST00000082416 59 ntBASIC0.04□□□□□ -2.4
Traf1P39428 Gm25401-201ENSMUST00000082975 106 ntBASIC0.04□□□□□ -2.4
Traf1P39428 Mir382-201ENSMUST00000083494 76 ntBASIC0.04□□□□□ -2.4
Traf1P39428 Gm23654-201ENSMUST00000116758 126 ntBASIC0.03□□□□□ -2.4
Traf1P39428 Gm24141-201ENSMUST00000122776 115 ntBASIC0.03□□□□□ -2.4
Traf1P39428 Gm44345-201ENSMUST00000199560 135 ntBASIC0.03□□□□□ -2.4
Traf1P39428 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.03□□□□□ -2.4
Traf1P39428 AC126939.1-201ENSMUST00000224943 226 ntBASIC0.03□□□□□ -2.4
Traf1P39428 mt-Tc-201ENSMUST00000082400 66 ntBASIC0.03□□□□□ -2.4
Traf1P39428 Gm25791-201ENSMUST00000083292 137 ntBASIC0.03□□□□□ -2.4
Traf1P39428 Mir802-201ENSMUST00000103258 97 ntBASIC0.02□□□□□ -2.41
Traf1P39428 Gm24913-201ENSMUST00000157286 107 ntBASIC0.02□□□□□ -2.41
Traf1P39428 Gm26369-201ENSMUST00000157825 100 ntBASIC0.02□□□□□ -2.41
Traf1P39428 Gm24399-201ENSMUST00000157869 74 ntBASIC0.02□□□□□ -2.41
Traf1P39428 Gm23036-201ENSMUST00000157885 99 ntBASIC0.02□□□□□ -2.41
Traf1P39428 Gm22966-201ENSMUST00000157957 129 ntBASIC0.02□□□□□ -2.41
Traf1P39428 Gm23065-201ENSMUST00000158236 130 ntBASIC0.02□□□□□ -2.41
Traf1P39428 Gm22089-201ENSMUST00000158336 102 ntBASIC0.02□□□□□ -2.41
Traf1P39428 Gm44803-201ENSMUST00000204384 156 ntBASIC0.02□□□□□ -2.41
Traf1P39428 AC124687.1-201ENSMUST00000221868 189 ntBASIC0.02□□□□□ -2.41
Traf1P39428 Gm25703-201ENSMUST00000083123 151 ntBASIC0.02□□□□□ -2.41
Traf1P39428 Mir363-201ENSMUST00000093598 75 ntBASIC0.02□□□□□ -2.41
Traf1P39428 Gm22451-201ENSMUST00000122803 151 ntBASIC0.01□□□□□ -2.41
Traf1P39428 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.01□□□□□ -2.41
Traf1P39428 Gm24649-201ENSMUST00000157106 134 ntBASIC0.01□□□□□ -2.41
Traf1P39428 Gm22788-201ENSMUST00000157876 61 ntBASIC0.01□□□□□ -2.41
Traf1P39428 Gm24467-201ENSMUST00000157887 126 ntBASIC0.01□□□□□ -2.41
Traf1P39428 Gm22708-201ENSMUST00000158987 103 ntBASIC0.01□□□□□ -2.41
Traf1P39428 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
Traf1P39428 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC0.01□□□□□ -2.41
Traf1P39428 Gm25081-201ENSMUST00000082534 108 ntBASIC0.01□□□□□ -2.41
Traf1P39428 Gm22652-201ENSMUST00000083207 131 ntBASIC0.01□□□□□ -2.41
Traf1P39428 Gm25497-201ENSMUST00000104425 132 ntBASIC0□□□□□ -2.41
Traf1P39428 Gm22048-201ENSMUST00000104721 89 ntBASIC0□□□□□ -2.41
Traf1P39428 Gm25309-201ENSMUST00000116728 126 ntBASIC0□□□□□ -2.41
Traf1P39428 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC0□□□□□ -2.41
Traf1P39428 Gm22077-201ENSMUST00000157594 93 ntBASIC0□□□□□ -2.41
Traf1P39428 Gm25885-201ENSMUST00000157779 109 ntBASIC0□□□□□ -2.41
Traf1P39428 Gm22775-201ENSMUST00000177630 120 ntBASIC0□□□□□ -2.41
Traf1P39428 Gm23569-201ENSMUST00000180120 120 ntBASIC0□□□□□ -2.41
Traf1P39428 Gm28270-201ENSMUST00000188550 109 ntBASIC0□□□□□ -2.41
Traf1P39428 Gm28328-201ENSMUST00000188869 109 ntBASIC0□□□□□ -2.41
Traf1P39428 Gm29047-201ENSMUST00000189816 108 ntBASIC0□□□□□ -2.41
Traf1P39428 Gm38208-201ENSMUST00000192476 114 ntBASIC0□□□□□ -2.41
Traf1P39428 Gm25635-201ENSMUST00000082675 131 ntBASIC0□□□□□ -2.41
Traf1P39428 Gm22368-201ENSMUST00000102416 109 ntBASIC-0.01□□□□□ -2.41
Traf1P39428 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
Traf1P39428 Gm24842-201ENSMUST00000158681 54 ntBASIC-0.01□□□□□ -2.41
Traf1P39428 Gm26007-201ENSMUST00000158798 120 ntBASIC-0.01□□□□□ -2.41
Traf1P39428 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.01□□□□□ -2.41
Traf1P39428 AC164561.1-201ENSMUST00000220414 115 ntBASIC-0.01□□□□□ -2.41
Traf1P39428 n-R5s12-201ENSMUST00000083785 119 ntBASIC-0.01□□□□□ -2.41
Traf1P39428 Gm24686-201ENSMUST00000157755 93 ntBASIC-0.02□□□□□ -2.41
Traf1P39428 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.02□□□□□ -2.41
Traf1P39428 Gm27928-201ENSMUST00000183747 256 ntBASIC-0.02□□□□□ -2.41
Traf1P39428 Gm43927-201ENSMUST00000204599 117 ntBASIC-0.02□□□□□ -2.41
Traf1P39428 Gm22681-201ENSMUST00000083853 106 ntBASIC-0.02□□□□□ -2.41
Traf1P39428 Gm24903-201ENSMUST00000158131 126 ntBASIC-0.03□□□□□ -2.41
Traf1P39428 Gm26712-201ENSMUST00000180813 217 ntBASIC-0.03□□□□□ -2.41
Traf1P39428 Gm23722-201ENSMUST00000083002 130 ntBASIC-0.03□□□□□ -2.41
Traf1P39428 Gm25629-201ENSMUST00000084001 107 ntBASIC-0.03□□□□□ -2.41
Traf1P39428 Gm24263-201ENSMUST00000104059 107 ntBASIC-0.04□□□□□ -2.42
Traf1P39428 Gm23012-201ENSMUST00000104149 83 ntBASIC-0.04□□□□□ -2.42
Traf1P39428 Gm25623-201ENSMUST00000157216 108 ntBASIC-0.04□□□□□ -2.42
Traf1P39428 Gm26412-201ENSMUST00000157666 55 ntBASIC-0.04□□□□□ -2.42
Traf1P39428 Gm44470-201ENSMUST00000203913 142 ntBASIC-0.04□□□□□ -2.42
Traf1P39428 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.04□□□□□ -2.42
Traf1P39428 Mir672-201ENSMUST00000102331 100 ntBASIC-0.05□□□□□ -2.42
Traf1P39428 Gm22962-201ENSMUST00000157962 73 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 76,532 protein–RNA pairs in 154.9 ms