Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm25279-201ENSMUST00000122608 133 ntBASIC1.85□□□□□ -2.11
RaraP11416 Gm24199-201ENSMUST00000157808 136 ntBASIC1.85□□□□□ -2.11
RaraP11416 Gm26038-201ENSMUST00000158151 106 ntBASIC1.85□□□□□ -2.11
RaraP11416 Gm22801-201ENSMUST00000175624 84 ntBASIC1.85□□□□□ -2.11
RaraP11416 Gm38295-201ENSMUST00000191951 151 ntBASIC1.85□□□□□ -2.11
RaraP11416 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.85□□□□□ -2.11
RaraP11416 Gm44469-201ENSMUST00000198558 79 ntBASIC1.85□□□□□ -2.11
RaraP11416 Gm24151-201ENSMUST00000082758 141 ntBASIC1.85□□□□□ -2.11
RaraP11416 Gm25417-201ENSMUST00000104212 131 ntBASIC1.84□□□□□ -2.11
RaraP11416 Gm24648-201ENSMUST00000157111 132 ntBASIC1.84□□□□□ -2.11
RaraP11416 Gm22539-201ENSMUST00000158167 117 ntBASIC1.84□□□□□ -2.11
RaraP11416 Gm22386-201ENSMUST00000158192 129 ntBASIC1.84□□□□□ -2.11
RaraP11416 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
RaraP11416 Gm26202-201ENSMUST00000082910 65 ntBASIC1.84□□□□□ -2.11
RaraP11416 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
RaraP11416 Mup-ps5-201ENSMUST00000118667 99 ntBASIC1.83□□□□□ -2.12
RaraP11416 Gm24868-201ENSMUST00000157265 136 ntBASIC1.83□□□□□ -2.12
RaraP11416 Gm24077-201ENSMUST00000158183 136 ntBASIC1.83□□□□□ -2.12
RaraP11416 Gm24129-201ENSMUST00000158537 97 ntBASIC1.83□□□□□ -2.12
RaraP11416 Gm10548-202ENSMUST00000165672 272 ntBASIC1.83□□□□□ -2.12
RaraP11416 Gm26712-201ENSMUST00000180813 217 ntBASIC1.83□□□□□ -2.12
RaraP11416 Mir6390-201ENSMUST00000184405 129 ntBASIC1.83□□□□□ -2.12
RaraP11416 Mir509-201ENSMUST00000196089 75 ntBASIC1.83□□□□□ -2.12
RaraP11416 Gm43927-201ENSMUST00000204599 117 ntBASIC1.83□□□□□ -2.12
RaraP11416 Gm24494-201ENSMUST00000083804 81 ntBASIC1.83□□□□□ -2.12
RaraP11416 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
RaraP11416 Gm26082-201ENSMUST00000104070 127 ntBASIC1.82□□□□□ -2.12
RaraP11416 Gm25110-201ENSMUST00000116684 121 ntBASIC1.82□□□□□ -2.12
RaraP11416 Mir3096-201ENSMUST00000116685 71 ntBASIC1.82□□□□□ -2.12
RaraP11416 Gm25775-201ENSMUST00000116716 121 ntBASIC1.82□□□□□ -2.12
RaraP11416 Gm24795-201ENSMUST00000116737 121 ntBASIC1.82□□□□□ -2.12
RaraP11416 Gm25171-201ENSMUST00000116926 121 ntBASIC1.82□□□□□ -2.12
RaraP11416 Gm24009-201ENSMUST00000157734 93 ntBASIC1.82□□□□□ -2.12
RaraP11416 Gm25600-201ENSMUST00000158357 106 ntBASIC1.82□□□□□ -2.12
RaraP11416 Gm23857-201ENSMUST00000158379 111 ntBASIC1.82□□□□□ -2.12
RaraP11416 Gm22862-201ENSMUST00000178593 121 ntBASIC1.82□□□□□ -2.12
RaraP11416 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
RaraP11416 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
RaraP11416 Gm24988-201ENSMUST00000104460 121 ntBASIC1.81□□□□□ -2.12
RaraP11416 Gm23109-201ENSMUST00000116867 126 ntBASIC1.81□□□□□ -2.12
RaraP11416 Gm24476-201ENSMUST00000157437 131 ntBASIC1.81□□□□□ -2.12
RaraP11416 Mir1961-201ENSMUST00000158643 112 ntBASIC1.81□□□□□ -2.12
RaraP11416 Gm25161-201ENSMUST00000158913 132 ntBASIC1.81□□□□□ -2.12
RaraP11416 Mir344-201ENSMUST00000083634 95 ntBASIC1.81□□□□□ -2.12
RaraP11416 Gm11333-201ENSMUST00000119479 148 ntBASIC1.8□□□□□ -2.12
RaraP11416 Gm24547-201ENSMUST00000158649 149 ntBASIC1.8□□□□□ -2.12
RaraP11416 Gm25974-201ENSMUST00000158701 94 ntBASIC1.8□□□□□ -2.12
RaraP11416 Mir3968-201ENSMUST00000175355 100 ntBASIC1.8□□□□□ -2.12
RaraP11416 Mir7679-201ENSMUST00000183379 63 ntBASIC1.8□□□□□ -2.12
RaraP11416 Gm43038-201ENSMUST00000202359 88 ntBASIC1.8□□□□□ -2.12
RaraP11416 Gm25798-201ENSMUST00000082641 107 ntBASIC1.8□□□□□ -2.12
RaraP11416 Gm24165-201ENSMUST00000082718 128 ntBASIC1.8□□□□□ -2.12
RaraP11416 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC1.8□□□□□ -2.12
RaraP11416 Gm22164-201ENSMUST00000158413 106 ntBASIC1.79□□□□□ -2.12
RaraP11416 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.79□□□□□ -2.12
RaraP11416 Gm27297-201ENSMUST00000183395 105 ntBASIC1.79□□□□□ -2.12
RaraP11416 Gm27326-201ENSMUST00000183504 95 ntBASIC1.79□□□□□ -2.12
RaraP11416 Mir6351-201ENSMUST00000183826 99 ntBASIC1.79□□□□□ -2.12
RaraP11416 Gm27248-201ENSMUST00000184004 166 ntBASIC1.79□□□□□ -2.12
RaraP11416 Mir6394-201ENSMUST00000184738 99 ntBASIC1.79□□□□□ -2.12
RaraP11416 Gm36956-201ENSMUST00000193830 214 ntBASIC1.79□□□□□ -2.12
RaraP11416 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.79□□□□□ -2.12
RaraP11416 Mir709-201ENSMUST00000102190 88 ntBASIC1.78□□□□□ -2.12
RaraP11416 Mir758-201ENSMUST00000103260 81 ntBASIC1.78□□□□□ -2.12
RaraP11416 Gm25056-201ENSMUST00000157372 62 ntBASIC1.78□□□□□ -2.12
RaraP11416 Gm22603-201ENSMUST00000157603 96 ntBASIC1.78□□□□□ -2.12
RaraP11416 Gm24394-201ENSMUST00000158141 123 ntBASIC1.78□□□□□ -2.12
RaraP11416 Mir669n-201ENSMUST00000158636 54 ntBASIC1.78□□□□□ -2.12
RaraP11416 Gm28435-201ENSMUST00000185496 108 ntBASIC1.78□□□□□ -2.12
RaraP11416 Gm29047-201ENSMUST00000189816 108 ntBASIC1.78□□□□□ -2.12
RaraP11416 Gm44384-201ENSMUST00000200208 114 ntBASIC1.78□□□□□ -2.12
RaraP11416 Gm26207-201ENSMUST00000082909 104 ntBASIC1.78□□□□□ -2.12
RaraP11416 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
RaraP11416 Gm25787-201ENSMUST00000104709 92 ntBASIC1.77□□□□□ -2.13
RaraP11416 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.77□□□□□ -2.13
RaraP11416 Gm26181-201ENSMUST00000157687 106 ntBASIC1.77□□□□□ -2.13
RaraP11416 Gm24677-201ENSMUST00000158755 150 ntBASIC1.77□□□□□ -2.13
RaraP11416 Gm24174-201ENSMUST00000158933 111 ntBASIC1.77□□□□□ -2.13
RaraP11416 Gm26158-201ENSMUST00000158973 119 ntBASIC1.77□□□□□ -2.13
RaraP11416 Gm24495-201ENSMUST00000178575 79 ntBASIC1.77□□□□□ -2.13
RaraP11416 Gm22253-201ENSMUST00000179870 79 ntBASIC1.77□□□□□ -2.13
RaraP11416 Gm24406-201ENSMUST00000083026 128 ntBASIC1.77□□□□□ -2.13
RaraP11416 Gm22753-201ENSMUST00000083657 107 ntBASIC1.77□□□□□ -2.13
RaraP11416 Gm22469-201ENSMUST00000104118 133 ntBASIC1.76□□□□□ -2.13
RaraP11416 Gm12432-201ENSMUST00000119540 186 ntBASIC1.76□□□□□ -2.13
RaraP11416 U6.1-201ENSMUST00000157443 101 ntBASIC1.76□□□□□ -2.13
RaraP11416 Gm27511-201ENSMUST00000183502 127 ntBASIC1.76□□□□□ -2.13
RaraP11416 Gm44488-201ENSMUST00000199467 119 ntBASIC1.76□□□□□ -2.13
RaraP11416 Gm44396-201ENSMUST00000199843 114 ntBASIC1.76□□□□□ -2.13
RaraP11416 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.76□□□□□ -2.13
RaraP11416 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.75□□□□□ -2.13
RaraP11416 Gm22785-201ENSMUST00000104087 132 ntBASIC1.75□□□□□ -2.13
RaraP11416 Gm23761-201ENSMUST00000158347 104 ntBASIC1.75□□□□□ -2.13
RaraP11416 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.75□□□□□ -2.13
RaraP11416 Mir6985-201ENSMUST00000184641 61 ntBASIC1.75□□□□□ -2.13
RaraP11416 Gm24445-201ENSMUST00000083981 107 ntBASIC1.75□□□□□ -2.13
RaraP11416 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.75□□□□□ -2.13
RaraP11416 Gm27993-201ENSMUST00000184362 85 ntBASIC1.74□□□□□ -2.13
RaraP11416 Gm28383-201ENSMUST00000187563 139 ntBASIC1.74□□□□□ -2.13
RaraP11416 Gm43911-201ENSMUST00000203097 76 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 282.3 ms