Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gm23790-201ENSMUST00000083013 107 ntBASIC1.45□□□□□ -2.18
Vti1aO89116 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.45□□□□□ -2.18
Vti1aO89116 Gm24271-201ENSMUST00000102327 111 ntBASIC1.44□□□□□ -2.18
Vti1aO89116 Mir8119-201ENSMUST00000183371 129 ntBASIC1.44□□□□□ -2.18
Vti1aO89116 Gm24311-201ENSMUST00000082570 104 ntBASIC1.44□□□□□ -2.18
Vti1aO89116 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.43□□□□□ -2.18
Vti1aO89116 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.43□□□□□ -2.18
Vti1aO89116 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.43□□□□□ -2.18
Vti1aO89116 Gm26062-201ENSMUST00000083379 107 ntBASIC1.43□□□□□ -2.18
Vti1aO89116 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Vti1aO89116 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Vti1aO89116 Gm22780-201ENSMUST00000104084 132 ntBASIC1.42□□□□□ -2.18
Vti1aO89116 Gm22673-201ENSMUST00000104415 131 ntBASIC1.42□□□□□ -2.18
Vti1aO89116 Gm26274-201ENSMUST00000157103 321 ntBASIC1.42□□□□□ -2.18
Vti1aO89116 Gm23261-201ENSMUST00000158316 136 ntBASIC1.42□□□□□ -2.18
Vti1aO89116 Gm25014-201ENSMUST00000158401 103 ntBASIC1.42□□□□□ -2.18
Vti1aO89116 Gm23060-201ENSMUST00000102345 109 ntBASIC1.41□□□□□ -2.18
Vti1aO89116 Gm25600-201ENSMUST00000158357 106 ntBASIC1.41□□□□□ -2.18
Vti1aO89116 Gm26158-201ENSMUST00000158973 119 ntBASIC1.41□□□□□ -2.18
Vti1aO89116 Gm23917-201ENSMUST00000175256 98 ntBASIC1.41□□□□□ -2.18
Vti1aO89116 Gm23410-201ENSMUST00000179967 107 ntBASIC1.41□□□□□ -2.18
Vti1aO89116 Gm22505-201ENSMUST00000082956 108 ntBASIC1.41□□□□□ -2.18
Vti1aO89116 Gm22363-201ENSMUST00000083100 108 ntBASIC1.41□□□□□ -2.18
Vti1aO89116 Gm23814-201ENSMUST00000083230 102 ntBASIC1.41□□□□□ -2.18
Vti1aO89116 Gm25629-201ENSMUST00000084001 107 ntBASIC1.41□□□□□ -2.18
Vti1aO89116 Mir500-201ENSMUST00000093600 92 ntBASIC1.41□□□□□ -2.18
Vti1aO89116 Gm22672-201ENSMUST00000104414 134 ntBASIC1.4□□□□□ -2.19
Vti1aO89116 Gm23661-201ENSMUST00000122630 87 ntBASIC1.4□□□□□ -2.19
Vti1aO89116 Gm23900-201ENSMUST00000157569 108 ntBASIC1.4□□□□□ -2.19
Vti1aO89116 Gm22515-201ENSMUST00000158273 305 ntBASIC1.4□□□□□ -2.19
Vti1aO89116 Gm24129-201ENSMUST00000158537 97 ntBASIC1.4□□□□□ -2.19
Vti1aO89116 Gm24801-201ENSMUST00000178503 105 ntBASIC1.4□□□□□ -2.19
Vti1aO89116 Gm27993-201ENSMUST00000184362 85 ntBASIC1.4□□□□□ -2.19
Vti1aO89116 Gm38323-201ENSMUST00000192450 210 ntBASIC1.4□□□□□ -2.19
Vti1aO89116 Gm43944-201ENSMUST00000205220 120 ntBASIC1.4□□□□□ -2.19
Vti1aO89116 mt-Tc-201ENSMUST00000082400 66 ntBASIC1.4□□□□□ -2.19
Vti1aO89116 Mir448-201ENSMUST00000083516 112 ntBASIC1.4□□□□□ -2.19
Vti1aO89116 Snord69-201ENSMUST00000104024 80 ntBASIC1.39□□□□□ -2.19
Vti1aO89116 Gm22074-201ENSMUST00000158595 113 ntBASIC1.39□□□□□ -2.19
Vti1aO89116 Gm23636-201ENSMUST00000175070 95 ntBASIC1.39□□□□□ -2.19
Vti1aO89116 Gm26466-201ENSMUST00000179615 79 ntBASIC1.39□□□□□ -2.19
Vti1aO89116 mt-Tn-201ENSMUST00000082399 71 ntBASIC1.39□□□□□ -2.19
Vti1aO89116 Gm45265-201ENSMUST00000210852 2497 ntBASIC1.39□□□□□ -2.19
Vti1aO89116 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC1.38□□□□□ -2.19
Vti1aO89116 Gm44932-201ENSMUST00000206799 121 ntBASIC1.38□□□□□ -2.19
Vti1aO89116 Gm25974-201ENSMUST00000158701 94 ntBASIC1.37□□□□□ -2.19
Vti1aO89116 Gm22466-201ENSMUST00000175278 69 ntBASIC1.37□□□□□ -2.19
Vti1aO89116 Gm29535-201ENSMUST00000185723 109 ntBASIC1.37□□□□□ -2.19
Vti1aO89116 Gm28143-201ENSMUST00000191082 109 ntBASIC1.37□□□□□ -2.19
Vti1aO89116 Gm26202-201ENSMUST00000082910 65 ntBASIC1.37□□□□□ -2.19
Vti1aO89116 Gm26301-201ENSMUST00000104813 95 ntBASIC1.36□□□□□ -2.19
Vti1aO89116 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1.36□□□□□ -2.19
Vti1aO89116 Gm26133-201ENSMUST00000157363 100 ntBASIC1.36□□□□□ -2.19
Vti1aO89116 Gm25166-201ENSMUST00000158909 111 ntBASIC1.36□□□□□ -2.19
Vti1aO89116 Gm27656-201ENSMUST00000185055 80 ntBASIC1.36□□□□□ -2.19
Vti1aO89116 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC1.36□□□□□ -2.19
Vti1aO89116 AC116319.1-201ENSMUST00000227765 222 ntBASIC1.36□□□□□ -2.19
Vti1aO89116 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
Vti1aO89116 Gm23652-201ENSMUST00000116752 107 ntBASIC1.35□□□□□ -2.19
Vti1aO89116 Gm26029-201ENSMUST00000158659 132 ntBASIC1.35□□□□□ -2.19
Vti1aO89116 Gm25693-201ENSMUST00000175443 85 ntBASIC1.35□□□□□ -2.19
Vti1aO89116 Gm22950-201ENSMUST00000082776 107 ntBASIC1.35□□□□□ -2.19
Vti1aO89116 Gm25274-201ENSMUST00000104296 135 ntBASIC1.34□□□□□ -2.19
Vti1aO89116 Snord71-201ENSMUST00000104361 85 ntBASIC1.34□□□□□ -2.19
Vti1aO89116 Gm22030-201ENSMUST00000116942 63 ntBASIC1.34□□□□□ -2.19
Vti1aO89116 Gm24290-201ENSMUST00000157634 96 ntBASIC1.34□□□□□ -2.19
Vti1aO89116 Gm24009-201ENSMUST00000157734 93 ntBASIC1.34□□□□□ -2.19
Vti1aO89116 Gm22212-201ENSMUST00000158096 106 ntBASIC1.34□□□□□ -2.19
Vti1aO89116 Gm24500-201ENSMUST00000158447 124 ntBASIC1.34□□□□□ -2.19
Vti1aO89116 Gm25768-201ENSMUST00000158570 98 ntBASIC1.34□□□□□ -2.19
Vti1aO89116 Gm24549-201ENSMUST00000158647 139 ntBASIC1.34□□□□□ -2.19
Vti1aO89116 Mir3079-201ENSMUST00000175428 90 ntBASIC1.34□□□□□ -2.19
Vti1aO89116 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.34□□□□□ -2.19
Vti1aO89116 Gm22251-201ENSMUST00000083216 107 ntBASIC1.34□□□□□ -2.19
Vti1aO89116 Mir30a-201ENSMUST00000083471 71 ntBASIC1.34□□□□□ -2.19
Vti1aO89116 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.34□□□□□ -2.2
Vti1aO89116 Gm24686-201ENSMUST00000157755 93 ntBASIC1.33□□□□□ -2.2
Vti1aO89116 Gm22729-201ENSMUST00000158088 129 ntBASIC1.33□□□□□ -2.2
Vti1aO89116 Gm38295-201ENSMUST00000191951 151 ntBASIC1.33□□□□□ -2.2
Vti1aO89116 Gm23038-201ENSMUST00000083873 104 ntBASIC1.33□□□□□ -2.2
Vti1aO89116 Gm22786-201ENSMUST00000104086 122 ntBASIC1.32□□□□□ -2.2
Vti1aO89116 Gm25170-201ENSMUST00000104191 129 ntBASIC1.32□□□□□ -2.2
Vti1aO89116 Gm24221-201ENSMUST00000158833 313 ntBASIC1.32□□□□□ -2.2
Vti1aO89116 Mir5619-201ENSMUST00000176065 61 ntBASIC1.32□□□□□ -2.2
Vti1aO89116 Gm27974-201ENSMUST00000183415 105 ntBASIC1.32□□□□□ -2.2
Vti1aO89116 Mir7091-201ENSMUST00000184075 79 ntBASIC1.32□□□□□ -2.2
Vti1aO89116 AC122327.1-201ENSMUST00000220778 108 ntBASIC1.32□□□□□ -2.2
Vti1aO89116 Gm24865-201ENSMUST00000103246 96 ntBASIC1.31□□□□□ -2.2
Vti1aO89116 Gm6272-201ENSMUST00000121256 171 ntBASIC1.31□□□□□ -2.2
Vti1aO89116 Gm26425-201ENSMUST00000122529 82 ntBASIC1.31□□□□□ -2.2
Vti1aO89116 Gm26089-201ENSMUST00000157898 107 ntBASIC1.31□□□□□ -2.2
Vti1aO89116 Gm23349-201ENSMUST00000158432 98 ntBASIC1.31□□□□□ -2.2
Vti1aO89116 Gm23340-201ENSMUST00000158955 123 ntBASIC1.31□□□□□ -2.2
Vti1aO89116 Gm27297-201ENSMUST00000183395 105 ntBASIC1.31□□□□□ -2.2
Vti1aO89116 Mir7063-201ENSMUST00000184158 91 ntBASIC1.31□□□□□ -2.2
Vti1aO89116 Gm42533-201ENSMUST00000196247 157 ntBASIC1.31□□□□□ -2.2
Vti1aO89116 Gm23301-201ENSMUST00000082713 65 ntBASIC1.31□□□□□ -2.2
Vti1aO89116 Gm25056-201ENSMUST00000157372 62 ntBASIC1.3□□□□□ -2.2
Vti1aO89116 Gm24252-201ENSMUST00000083700 132 ntBASIC1.3□□□□□ -2.2
Vti1aO89116 Gm25022-201ENSMUST00000102205 83 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 139.1 ms