Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Gm37796-201ENSMUST00000195327 134 ntBASIC0.88□□□□□ -2.27
Prom1O54990 Gm25138-201ENSMUST00000083248 136 ntBASIC0.88□□□□□ -2.27
Prom1O54990 Gm22055-201ENSMUST00000083388 107 ntBASIC0.88□□□□□ -2.27
Prom1O54990 Snord78-201ENSMUST00000104032 66 ntBASIC0.87□□□□□ -2.27
Prom1O54990 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.87□□□□□ -2.27
Prom1O54990 Mir100-201ENSMUST00000175270 80 ntBASIC0.87□□□□□ -2.27
Prom1O54990 Gm44211-201ENSMUST00000204867 145 ntBASIC0.87□□□□□ -2.27
Prom1O54990 Gm24586-201ENSMUST00000116695 89 ntBASIC0.86□□□□□ -2.27
Prom1O54990 Gm24290-201ENSMUST00000157634 96 ntBASIC0.86□□□□□ -2.27
Prom1O54990 Gm24500-201ENSMUST00000158447 124 ntBASIC0.86□□□□□ -2.27
Prom1O54990 Gm22431-201ENSMUST00000158545 107 ntBASIC0.86□□□□□ -2.27
Prom1O54990 Gm22503-201ENSMUST00000158983 115 ntBASIC0.86□□□□□ -2.27
Prom1O54990 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.86□□□□□ -2.27
Prom1O54990 Mir33-201ENSMUST00000083531 69 ntBASIC0.86□□□□□ -2.27
Prom1O54990 Gm23601-201ENSMUST00000157259 131 ntBASIC0.85□□□□□ -2.27
Prom1O54990 Gm25098-201ENSMUST00000177580 79 ntBASIC0.85□□□□□ -2.27
Prom1O54990 Gm23356-201ENSMUST00000177610 79 ntBASIC0.85□□□□□ -2.27
Prom1O54990 Gm24027-201ENSMUST00000177611 79 ntBASIC0.85□□□□□ -2.27
Prom1O54990 Gm22511-201ENSMUST00000177628 79 ntBASIC0.85□□□□□ -2.27
Prom1O54990 Gm22630-201ENSMUST00000177781 79 ntBASIC0.85□□□□□ -2.27
Prom1O54990 Gm23560-201ENSMUST00000177782 79 ntBASIC0.85□□□□□ -2.27
Prom1O54990 Gm25462-201ENSMUST00000177833 79 ntBASIC0.85□□□□□ -2.27
Prom1O54990 Gm26059-201ENSMUST00000177865 79 ntBASIC0.85□□□□□ -2.27
Prom1O54990 Gm22255-201ENSMUST00000177933 79 ntBASIC0.85□□□□□ -2.27
Prom1O54990 Gm25146-201ENSMUST00000177976 79 ntBASIC0.85□□□□□ -2.27
Prom1O54990 Gm25523-201ENSMUST00000178044 79 ntBASIC0.85□□□□□ -2.27
Prom1O54990 Gm24585-201ENSMUST00000178104 79 ntBASIC0.85□□□□□ -2.27
Prom1O54990 Gm22627-201ENSMUST00000178127 79 ntBASIC0.85□□□□□ -2.27
Prom1O54990 Gm22912-201ENSMUST00000178242 79 ntBASIC0.85□□□□□ -2.27
Prom1O54990 Gm24866-201ENSMUST00000178338 79 ntBASIC0.85□□□□□ -2.27
Prom1O54990 Gm22524-201ENSMUST00000178357 79 ntBASIC0.85□□□□□ -2.27
Prom1O54990 Gm25710-201ENSMUST00000178367 79 ntBASIC0.85□□□□□ -2.27
Prom1O54990 Gm23575-201ENSMUST00000178406 79 ntBASIC0.85□□□□□ -2.27
Prom1O54990 Gm24872-201ENSMUST00000178434 79 ntBASIC0.85□□□□□ -2.27
Prom1O54990 Gm22449-201ENSMUST00000178924 79 ntBASIC0.85□□□□□ -2.27
Prom1O54990 Gm24702-201ENSMUST00000178965 79 ntBASIC0.85□□□□□ -2.27
Prom1O54990 Gm24206-201ENSMUST00000179011 79 ntBASIC0.85□□□□□ -2.27
Prom1O54990 Gm24528-201ENSMUST00000179164 79 ntBASIC0.85□□□□□ -2.27
Prom1O54990 Gm22909-201ENSMUST00000179190 79 ntBASIC0.85□□□□□ -2.27
Prom1O54990 Gm26334-201ENSMUST00000179403 79 ntBASIC0.85□□□□□ -2.27
Prom1O54990 Gm25463-201ENSMUST00000179405 79 ntBASIC0.85□□□□□ -2.27
Prom1O54990 Gm25742-201ENSMUST00000179530 79 ntBASIC0.85□□□□□ -2.27
Prom1O54990 Gm25209-201ENSMUST00000179576 79 ntBASIC0.85□□□□□ -2.27
Prom1O54990 Gm26392-201ENSMUST00000179661 79 ntBASIC0.85□□□□□ -2.27
Prom1O54990 Gm25230-201ENSMUST00000179740 79 ntBASIC0.85□□□□□ -2.27
Prom1O54990 Gm26434-201ENSMUST00000179778 79 ntBASIC0.85□□□□□ -2.27
Prom1O54990 Gm25741-201ENSMUST00000179825 79 ntBASIC0.85□□□□□ -2.27
Prom1O54990 Gm24759-201ENSMUST00000179827 79 ntBASIC0.85□□□□□ -2.27
Prom1O54990 Gm24219-201ENSMUST00000179861 79 ntBASIC0.85□□□□□ -2.27
Prom1O54990 Gm44602-201ENSMUST00000205948 132 ntBASIC0.85□□□□□ -2.27
Prom1O54990 Gm25629-201ENSMUST00000084001 107 ntBASIC0.85□□□□□ -2.27
Prom1O54990 Gm23254-201ENSMUST00000097244 79 ntBASIC0.85□□□□□ -2.27
Prom1O54990 Mir695-201ENSMUST00000102261 109 ntBASIC0.84□□□□□ -2.27
Prom1O54990 Gm25753-201ENSMUST00000116792 121 ntBASIC0.84□□□□□ -2.27
Prom1O54990 Gm25889-201ENSMUST00000157775 107 ntBASIC0.84□□□□□ -2.27
Prom1O54990 Gm24947-201ENSMUST00000158334 110 ntBASIC0.84□□□□□ -2.27
Prom1O54990 Gm25600-201ENSMUST00000158357 106 ntBASIC0.84□□□□□ -2.27
Prom1O54990 Gm38274-201ENSMUST00000195689 148 ntBASIC0.84□□□□□ -2.27
Prom1O54990 Gm11694-201ENSMUST00000118637 159 ntBASIC0.83□□□□□ -2.28
Prom1O54990 Gm25056-201ENSMUST00000157372 62 ntBASIC0.83□□□□□ -2.28
Prom1O54990 Gm22509-201ENSMUST00000082775 107 ntBASIC0.83□□□□□ -2.28
Prom1O54990 Gm26456-201ENSMUST00000082831 111 ntBASIC0.83□□□□□ -2.28
Prom1O54990 Gm24524-201ENSMUST00000082925 170 ntBASIC0.83□□□□□ -2.28
Prom1O54990 Mir7-1-201ENSMUST00000083500 108 ntBASIC0.83□□□□□ -2.28
Prom1O54990 Mir101a-201ENSMUST00000083517 83 ntBASIC0.83□□□□□ -2.28
Prom1O54990 Snord80-201ENSMUST00000083801 81 ntBASIC0.83□□□□□ -2.28
Prom1O54990 Gm25684-201ENSMUST00000083941 107 ntBASIC0.83□□□□□ -2.28
Prom1O54990 Gm22490-201ENSMUST00000157188 119 ntBASIC0.82□□□□□ -2.28
Prom1O54990 Gm23065-201ENSMUST00000158236 130 ntBASIC0.82□□□□□ -2.28
Prom1O54990 Mir3109-201ENSMUST00000175301 88 ntBASIC0.82□□□□□ -2.28
Prom1O54990 Mir6364-201ENSMUST00000183396 86 ntBASIC0.82□□□□□ -2.28
Prom1O54990 Gm28435-201ENSMUST00000185496 108 ntBASIC0.82□□□□□ -2.28
Prom1O54990 Gm26054-201ENSMUST00000083037 107 ntBASIC0.82□□□□□ -2.28
Prom1O54990 Gm24492-201ENSMUST00000083798 107 ntBASIC0.82□□□□□ -2.28
Prom1O54990 Gm22689-201ENSMUST00000102452 110 ntBASIC0.81□□□□□ -2.28
Prom1O54990 Gm22030-201ENSMUST00000116942 63 ntBASIC0.81□□□□□ -2.28
Prom1O54990 Gm23989-201ENSMUST00000117030 66 ntBASIC0.81□□□□□ -2.28
Prom1O54990 Gm14884-201ENSMUST00000120456 196 ntBASIC0.81□□□□□ -2.28
Prom1O54990 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
Prom1O54990 Gm22089-201ENSMUST00000158336 102 ntBASIC0.81□□□□□ -2.28
Prom1O54990 Gm24323-201ENSMUST00000175342 77 ntBASIC0.81□□□□□ -2.28
Prom1O54990 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
Prom1O54990 Gm44301-201ENSMUST00000200362 143 ntBASIC0.81□□□□□ -2.28
Prom1O54990 Gm25899-201ENSMUST00000082672 141 ntBASIC0.81□□□□□ -2.28
Prom1O54990 Gm24129-201ENSMUST00000158537 97 ntBASIC0.8□□□□□ -2.28
Prom1O54990 Mir6342-201ENSMUST00000183870 125 ntBASIC0.8□□□□□ -2.28
Prom1O54990 Gm26338-201ENSMUST00000102372 110 ntBASIC0.79□□□□□ -2.28
Prom1O54990 Gm22544-201ENSMUST00000104349 127 ntBASIC0.79□□□□□ -2.28
Prom1O54990 Gm23661-201ENSMUST00000122630 87 ntBASIC0.79□□□□□ -2.28
Prom1O54990 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.79□□□□□ -2.28
Prom1O54990 Gm23605-201ENSMUST00000157255 127 ntBASIC0.79□□□□□ -2.28
Prom1O54990 Gm22213-201ENSMUST00000157564 119 ntBASIC0.79□□□□□ -2.28
Prom1O54990 Gm22541-201ENSMUST00000158165 127 ntBASIC0.79□□□□□ -2.28
Prom1O54990 Gm43977-201ENSMUST00000203970 189 ntBASIC0.79□□□□□ -2.28
Prom1O54990 mt-Tf-201ENSMUST00000082387 68 ntBASIC0.79□□□□□ -2.28
Prom1O54990 Gm23735-201ENSMUST00000082551 134 ntBASIC0.79□□□□□ -2.28
Prom1O54990 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.79□□□□□ -2.28
Prom1O54990 Gm25815-201ENSMUST00000082755 107 ntBASIC0.79□□□□□ -2.28
Prom1O54990 Mir377-201ENSMUST00000083504 68 ntBASIC0.79□□□□□ -2.28
Prom1O54990 Mir1a-1-201ENSMUST00000093635 77 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 127.7 ms