Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm24686-201ENSMUST00000157755 93 ntBASIC1.4□□□□□ -2.19
Pcdh1F7BJK1 Gm23857-201ENSMUST00000158379 111 ntBASIC1.4□□□□□ -2.19
Pcdh1F7BJK1 Gm23114-201ENSMUST00000158478 117 ntBASIC1.4□□□□□ -2.19
Pcdh1F7BJK1 Gm26202-201ENSMUST00000082910 65 ntBASIC1.4□□□□□ -2.19
Pcdh1F7BJK1 Mir653-201ENSMUST00000102402 85 ntBASIC1.39□□□□□ -2.19
Pcdh1F7BJK1 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.39□□□□□ -2.19
Pcdh1F7BJK1 Gm23221-201ENSMUST00000158118 93 ntBASIC1.39□□□□□ -2.19
Pcdh1F7BJK1 Gm23339-201ENSMUST00000158962 139 ntBASIC1.39□□□□□ -2.19
Pcdh1F7BJK1 Gm24638-201ENSMUST00000179807 132 ntBASIC1.39□□□□□ -2.19
Pcdh1F7BJK1 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.39□□□□□ -2.19
Pcdh1F7BJK1 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
Pcdh1F7BJK1 Mir466l-201ENSMUST00000104866 121 ntBASIC1.38□□□□□ -2.19
Pcdh1F7BJK1 Gm15115-201ENSMUST00000121145 264 ntBASIC1.38□□□□□ -2.19
Pcdh1F7BJK1 Gm22205-201ENSMUST00000122655 71 ntBASIC1.38□□□□□ -2.19
Pcdh1F7BJK1 Gm25382-201ENSMUST00000157811 97 ntBASIC1.38□□□□□ -2.19
Pcdh1F7BJK1 Gm25600-201ENSMUST00000158357 106 ntBASIC1.38□□□□□ -2.19
Pcdh1F7BJK1 Gm27975-201ENSMUST00000184400 101 ntBASIC1.38□□□□□ -2.19
Pcdh1F7BJK1 Gm25696-201ENSMUST00000082900 105 ntBASIC1.38□□□□□ -2.19
Pcdh1F7BJK1 Gm22753-201ENSMUST00000083657 107 ntBASIC1.38□□□□□ -2.19
Pcdh1F7BJK1 Gm24384-201ENSMUST00000122693 75 ntBASIC1.37□□□□□ -2.19
Pcdh1F7BJK1 Gm25974-201ENSMUST00000158701 94 ntBASIC1.37□□□□□ -2.19
Pcdh1F7BJK1 AC157602.1-201ENSMUST00000197446 105 ntBASIC1.37□□□□□ -2.19
Pcdh1F7BJK1 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.37□□□□□ -2.19
Pcdh1F7BJK1 Mir324-201ENSMUST00000083600 89 ntBASIC1.37□□□□□ -2.19
Pcdh1F7BJK1 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Pcdh1F7BJK1 Gm24009-201ENSMUST00000157734 93 ntBASIC1.36□□□□□ -2.19
Pcdh1F7BJK1 Gm22732-201ENSMUST00000158093 121 ntBASIC1.36□□□□□ -2.19
Pcdh1F7BJK1 Gm38295-201ENSMUST00000191951 151 ntBASIC1.36□□□□□ -2.19
Pcdh1F7BJK1 Gm44488-201ENSMUST00000199467 119 ntBASIC1.36□□□□□ -2.19
Pcdh1F7BJK1 Mir148b-201ENSMUST00000083626 97 ntBASIC1.36□□□□□ -2.19
Pcdh1F7BJK1 Gm23130-201ENSMUST00000104252 74 ntBASIC1.35□□□□□ -2.19
Pcdh1F7BJK1 Gm25061-201ENSMUST00000104665 107 ntBASIC1.35□□□□□ -2.19
Pcdh1F7BJK1 Gm24648-201ENSMUST00000157111 132 ntBASIC1.35□□□□□ -2.19
Pcdh1F7BJK1 Mir1933-201ENSMUST00000158930 88 ntBASIC1.35□□□□□ -2.19
Pcdh1F7BJK1 Gm26158-201ENSMUST00000158973 119 ntBASIC1.35□□□□□ -2.19
Pcdh1F7BJK1 Gm27297-201ENSMUST00000183395 105 ntBASIC1.35□□□□□ -2.19
Pcdh1F7BJK1 Gm27420-201ENSMUST00000183823 79 ntBASIC1.35□□□□□ -2.19
Pcdh1F7BJK1 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC1.35□□□□□ -2.19
Pcdh1F7BJK1 Gm27993-201ENSMUST00000184362 85 ntBASIC1.35□□□□□ -2.19
Pcdh1F7BJK1 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
Pcdh1F7BJK1 Mup-ps5-201ENSMUST00000118667 99 ntBASIC1.34□□□□□ -2.19
Pcdh1F7BJK1 Snord13-201ENSMUST00000157627 104 ntBASIC1.34□□□□□ -2.19
Pcdh1F7BJK1 Gm22983-201ENSMUST00000158308 104 ntBASIC1.34□□□□□ -2.19
Pcdh1F7BJK1 Traj60-201ENSMUST00000167781 54 ntBASIC1.34□□□□□ -2.19
Pcdh1F7BJK1 Gm18433-201ENSMUST00000192747 197 ntBASIC1.34□□□□□ -2.19
Pcdh1F7BJK1 Mir5117-201ENSMUST00000083226 84 ntBASIC1.34□□□□□ -2.19
Pcdh1F7BJK1 Mir29a-201ENSMUST00000083676 88 ntBASIC1.34□□□□□ -2.19
Pcdh1F7BJK1 Gm22761-201ENSMUST00000102278 96 ntBASIC1.33□□□□□ -2.2
Pcdh1F7BJK1 Gm24895-201ENSMUST00000122742 74 ntBASIC1.33□□□□□ -2.2
Pcdh1F7BJK1 Gm43927-201ENSMUST00000204599 117 ntBASIC1.33□□□□□ -2.2
Pcdh1F7BJK1 Gm26224-201ENSMUST00000082506 80 ntBASIC1.33□□□□□ -2.2
Pcdh1F7BJK1 Gm25495-201ENSMUST00000104431 131 ntBASIC1.32□□□□□ -2.2
Pcdh1F7BJK1 Gm26478-201ENSMUST00000122611 133 ntBASIC1.32□□□□□ -2.2
Pcdh1F7BJK1 Gm23267-201ENSMUST00000178490 132 ntBASIC1.32□□□□□ -2.2
Pcdh1F7BJK1 Gm26712-201ENSMUST00000180813 217 ntBASIC1.32□□□□□ -2.2
Pcdh1F7BJK1 Mir509-201ENSMUST00000196089 75 ntBASIC1.32□□□□□ -2.2
Pcdh1F7BJK1 Gm24203-201ENSMUST00000082949 114 ntBASIC1.32□□□□□ -2.2
Pcdh1F7BJK1 Gm26274-201ENSMUST00000157103 321 ntBASIC1.31□□□□□ -2.2
Pcdh1F7BJK1 Gm25056-201ENSMUST00000157372 62 ntBASIC1.31□□□□□ -2.2
Pcdh1F7BJK1 Gm26089-201ENSMUST00000157898 107 ntBASIC1.31□□□□□ -2.2
Pcdh1F7BJK1 Mir1950-201ENSMUST00000158526 74 ntBASIC1.31□□□□□ -2.2
Pcdh1F7BJK1 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.31□□□□□ -2.2
Pcdh1F7BJK1 Gm22458-201ENSMUST00000082576 107 ntBASIC1.31□□□□□ -2.2
Pcdh1F7BJK1 Gm22030-201ENSMUST00000116942 63 ntBASIC1.3□□□□□ -2.2
Pcdh1F7BJK1 Gm11857-201ENSMUST00000119817 324 ntBASIC1.3□□□□□ -2.2
Pcdh1F7BJK1 Gm24593-201ENSMUST00000122507 106 ntBASIC1.3□□□□□ -2.2
Pcdh1F7BJK1 Gm24290-201ENSMUST00000157634 96 ntBASIC1.3□□□□□ -2.2
Pcdh1F7BJK1 Gm25693-201ENSMUST00000175443 85 ntBASIC1.3□□□□□ -2.2
Pcdh1F7BJK1 Gm16399-201ENSMUST00000181423 219 ntBASIC1.3□□□□□ -2.2
Pcdh1F7BJK1 Gm43944-201ENSMUST00000205220 120 ntBASIC1.3□□□□□ -2.2
Pcdh1F7BJK1 Mir320-201ENSMUST00000083594 82 ntBASIC1.3□□□□□ -2.2
Pcdh1F7BJK1 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
Pcdh1F7BJK1 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Pcdh1F7BJK1 Gm25759-201ENSMUST00000103988 129 ntBASIC1.29□□□□□ -2.2
Pcdh1F7BJK1 Gm25832-201ENSMUST00000104140 130 ntBASIC1.29□□□□□ -2.2
Pcdh1F7BJK1 Gm23715-201ENSMUST00000157354 106 ntBASIC1.29□□□□□ -2.2
Pcdh1F7BJK1 Gm24808-201ENSMUST00000157993 118 ntBASIC1.29□□□□□ -2.2
Pcdh1F7BJK1 Snora26-201ENSMUST00000175614 121 ntBASIC1.29□□□□□ -2.2
Pcdh1F7BJK1 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
Pcdh1F7BJK1 Gm23714-201ENSMUST00000179259 105 ntBASIC1.29□□□□□ -2.2
Pcdh1F7BJK1 Gm24208-201ENSMUST00000082783 135 ntBASIC1.29□□□□□ -2.2
Pcdh1F7BJK1 Gm24162-201ENSMUST00000093665 102 ntBASIC1.29□□□□□ -2.2
Pcdh1F7BJK1 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Pcdh1F7BJK1 Mir216b-201ENSMUST00000102363 86 ntBASIC1.28□□□□□ -2.2
Pcdh1F7BJK1 Gm25322-201ENSMUST00000122556 104 ntBASIC1.28□□□□□ -2.2
Pcdh1F7BJK1 Gm25968-201ENSMUST00000157167 100 ntBASIC1.28□□□□□ -2.2
Pcdh1F7BJK1 Gm24674-201ENSMUST00000179194 104 ntBASIC1.28□□□□□ -2.2
Pcdh1F7BJK1 Gm25644-201ENSMUST00000083209 107 ntBASIC1.28□□□□□ -2.2
Pcdh1F7BJK1 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC1.28□□□□□ -2.2
Pcdh1F7BJK1 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.28□□□□□ -2.21
Pcdh1F7BJK1 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Pcdh1F7BJK1 Snord69-201ENSMUST00000104024 80 ntBASIC1.27□□□□□ -2.21
Pcdh1F7BJK1 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1.27□□□□□ -2.21
Pcdh1F7BJK1 Gm22559-201ENSMUST00000157329 134 ntBASIC1.27□□□□□ -2.21
Pcdh1F7BJK1 Gm23558-201ENSMUST00000157823 80 ntBASIC1.27□□□□□ -2.21
Pcdh1F7BJK1 Gm22466-201ENSMUST00000175278 69 ntBASIC1.27□□□□□ -2.21
Pcdh1F7BJK1 Gm24271-201ENSMUST00000102327 111 ntBASIC1.26□□□□□ -2.21
Pcdh1F7BJK1 Gm22149-201ENSMUST00000104442 136 ntBASIC1.26□□□□□ -2.21
Pcdh1F7BJK1 Gm24946-201ENSMUST00000158332 106 ntBASIC1.26□□□□□ -2.21
Pcdh1F7BJK1 AC116319.1-201ENSMUST00000227765 222 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 169.3 ms