Protein–RNA interactions for Protein: F6U8V3

H2-M11, Histocompatibility 2, M region locus 11 (Fragment), mousemouse

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2-M11F6U8V3 Mir1949-202ENSMUST00000199259 70 ntBASIC0.29□□□□□ -2.36
H2-M11F6U8V3 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC0.29□□□□□ -2.36
H2-M11F6U8V3 Gm24445-201ENSMUST00000083981 107 ntBASIC0.29□□□□□ -2.36
H2-M11F6U8V3 Gm22772-201ENSMUST00000104451 121 ntBASIC0.28□□□□□ -2.36
H2-M11F6U8V3 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.28□□□□□ -2.36
H2-M11F6U8V3 Gm22196-201ENSMUST00000116865 109 ntBASIC0.28□□□□□ -2.36
H2-M11F6U8V3 Gm25375-201ENSMUST00000158157 135 ntBASIC0.28□□□□□ -2.36
H2-M11F6U8V3 Gm22239-201ENSMUST00000175220 103 ntBASIC0.28□□□□□ -2.36
H2-M11F6U8V3 Gm22451-201ENSMUST00000122803 151 ntBASIC0.27□□□□□ -2.37
H2-M11F6U8V3 Gm24288-201ENSMUST00000157630 144 ntBASIC0.27□□□□□ -2.37
H2-M11F6U8V3 Gm22541-201ENSMUST00000158165 127 ntBASIC0.27□□□□□ -2.37
H2-M11F6U8V3 Gm22638-201ENSMUST00000179674 107 ntBASIC0.27□□□□□ -2.37
H2-M11F6U8V3 Gm38298-201ENSMUST00000193578 118 ntBASIC0.27□□□□□ -2.37
H2-M11F6U8V3 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC0.27□□□□□ -2.37
H2-M11F6U8V3 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.27□□□□□ -2.37
H2-M11F6U8V3 Mir297a-2-201ENSMUST00000103795 90 ntBASIC0.26□□□□□ -2.37
H2-M11F6U8V3 Gm25915-201ENSMUST00000104265 126 ntBASIC0.26□□□□□ -2.37
H2-M11F6U8V3 Gm12086-201ENSMUST00000120863 228 ntBASIC0.26□□□□□ -2.37
H2-M11F6U8V3 Gm26369-201ENSMUST00000157825 100 ntBASIC0.26□□□□□ -2.37
H2-M11F6U8V3 Gm23065-201ENSMUST00000158236 130 ntBASIC0.26□□□□□ -2.37
H2-M11F6U8V3 Gm22983-201ENSMUST00000158308 104 ntBASIC0.26□□□□□ -2.37
H2-M11F6U8V3 Gm24129-201ENSMUST00000158537 97 ntBASIC0.26□□□□□ -2.37
H2-M11F6U8V3 Gm27851-201ENSMUST00000183529 63 ntBASIC0.26□□□□□ -2.37
H2-M11F6U8V3 Gm42845-201ENSMUST00000197766 105 ntBASIC0.26□□□□□ -2.37
H2-M11F6U8V3 Gm45197-201ENSMUST00000205288 151 ntBASIC0.26□□□□□ -2.37
H2-M11F6U8V3 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.26□□□□□ -2.37
H2-M11F6U8V3 Gm13065-201ENSMUST00000119178 141 ntBASIC0.25□□□□□ -2.37
H2-M11F6U8V3 Gm24649-201ENSMUST00000157106 134 ntBASIC0.25□□□□□ -2.37
H2-M11F6U8V3 Gm24009-201ENSMUST00000157734 93 ntBASIC0.25□□□□□ -2.37
H2-M11F6U8V3 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC0.25□□□□□ -2.37
H2-M11F6U8V3 Mir3105-201ENSMUST00000175480 85 ntBASIC0.25□□□□□ -2.37
H2-M11F6U8V3 Gm44828-201ENSMUST00000203745 106 ntBASIC0.25□□□□□ -2.37
H2-M11F6U8V3 Gm20734-201ENSMUST00000216939 193 ntBASIC0.25□□□□□ -2.37
H2-M11F6U8V3 Mir1a-1-201ENSMUST00000093635 77 ntBASIC0.25□□□□□ -2.37
H2-M11F6U8V3 Mir216b-201ENSMUST00000102363 86 ntBASIC0.24□□□□□ -2.37
H2-M11F6U8V3 Gm23531-201ENSMUST00000104567 68 ntBASIC0.24□□□□□ -2.37
H2-M11F6U8V3 Gm27475-201ENSMUST00000183420 61 ntBASIC0.24□□□□□ -2.37
H2-M11F6U8V3 Mir7065-201ENSMUST00000185110 61 ntBASIC0.24□□□□□ -2.37
H2-M11F6U8V3 Mir376b-201ENSMUST00000195930 82 ntBASIC0.24□□□□□ -2.37
H2-M11F6U8V3 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.24□□□□□ -2.37
H2-M11F6U8V3 Gm25040-201ENSMUST00000103877 66 ntBASIC0.23□□□□□ -2.37
H2-M11F6U8V3 Gm23578-201ENSMUST00000103943 104 ntBASIC0.23□□□□□ -2.37
H2-M11F6U8V3 Gm23986-201ENSMUST00000157144 63 ntBASIC0.23□□□□□ -2.37
H2-M11F6U8V3 Gm22842-201ENSMUST00000157709 118 ntBASIC0.23□□□□□ -2.37
H2-M11F6U8V3 Gm22431-201ENSMUST00000158545 107 ntBASIC0.23□□□□□ -2.37
H2-M11F6U8V3 Gm23384-201ENSMUST00000158593 103 ntBASIC0.23□□□□□ -2.37
H2-M11F6U8V3 Gm25247-201ENSMUST00000175475 90 ntBASIC0.23□□□□□ -2.37
H2-M11F6U8V3 Gm27980-201ENSMUST00000184094 169 ntBASIC0.23□□□□□ -2.37
H2-M11F6U8V3 Gm38295-201ENSMUST00000191951 151 ntBASIC0.23□□□□□ -2.37
H2-M11F6U8V3 AC124687.1-201ENSMUST00000221868 189 ntBASIC0.23□□□□□ -2.37
H2-M11F6U8V3 Mir200a-201ENSMUST00000083466 90 ntBASIC0.23□□□□□ -2.37
H2-M11F6U8V3 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC0.23□□□□□ -2.37
H2-M11F6U8V3 Gm24233-201ENSMUST00000104317 122 ntBASIC0.22□□□□□ -2.37
H2-M11F6U8V3 Gm22558-201ENSMUST00000157326 95 ntBASIC0.22□□□□□ -2.37
H2-M11F6U8V3 Gm22286-201ENSMUST00000179708 107 ntBASIC0.22□□□□□ -2.37
H2-M11F6U8V3 Mir7077-201ENSMUST00000183991 57 ntBASIC0.22□□□□□ -2.37
H2-M11F6U8V3 Gm23507-201ENSMUST00000083078 107 ntBASIC0.22□□□□□ -2.37
H2-M11F6U8V3 Gm22297-201ENSMUST00000083312 106 ntBASIC0.22□□□□□ -2.37
H2-M11F6U8V3 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.22□□□□□ -2.37
H2-M11F6U8V3 Mir710-201ENSMUST00000102088 110 ntBASIC0.21□□□□□ -2.38
H2-M11F6U8V3 Gm23651-201ENSMUST00000116755 120 ntBASIC0.21□□□□□ -2.38
H2-M11F6U8V3 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
H2-M11F6U8V3 Gm3702-201ENSMUST00000211754 346 ntBASIC0.21□□□□□ -2.38
H2-M11F6U8V3 Gm25635-201ENSMUST00000082675 131 ntBASIC0.21□□□□□ -2.38
H2-M11F6U8V3 Gm26202-201ENSMUST00000082910 65 ntBASIC0.21□□□□□ -2.38
H2-M11F6U8V3 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.21□□□□□ -2.38
H2-M11F6U8V3 Gm10351-201ENSMUST00000087694 125 ntBASIC0.21□□□□□ -2.38
H2-M11F6U8V3 Snord64-201ENSMUST00000104003 67 ntBASIC0.2□□□□□ -2.38
H2-M11F6U8V3 Gm24278-201ENSMUST00000104239 127 ntBASIC0.2□□□□□ -2.38
H2-M11F6U8V3 Gm23654-201ENSMUST00000116758 126 ntBASIC0.2□□□□□ -2.38
H2-M11F6U8V3 Gm24833-201ENSMUST00000116775 120 ntBASIC0.2□□□□□ -2.38
H2-M11F6U8V3 Gm22031-201ENSMUST00000116945 126 ntBASIC0.2□□□□□ -2.38
H2-M11F6U8V3 Mir1197-201ENSMUST00000117037 120 ntBASIC0.2□□□□□ -2.38
H2-M11F6U8V3 Gm24399-201ENSMUST00000157869 74 ntBASIC0.2□□□□□ -2.38
H2-M11F6U8V3 Gm22788-201ENSMUST00000157876 61 ntBASIC0.2□□□□□ -2.38
H2-M11F6U8V3 Gm27297-201ENSMUST00000183395 105 ntBASIC0.2□□□□□ -2.38
H2-M11F6U8V3 Gm27607-201ENSMUST00000185162 122 ntBASIC0.2□□□□□ -2.38
H2-M11F6U8V3 Gm26498-201ENSMUST00000177799 79 ntBASIC0.19□□□□□ -2.38
H2-M11F6U8V3 Gm26230-201ENSMUST00000180141 79 ntBASIC0.19□□□□□ -2.38
H2-M11F6U8V3 Gm28270-201ENSMUST00000188550 109 ntBASIC0.19□□□□□ -2.38
H2-M11F6U8V3 Gm28328-201ENSMUST00000188869 109 ntBASIC0.19□□□□□ -2.38
H2-M11F6U8V3 Gm22303-201ENSMUST00000082686 122 ntBASIC0.19□□□□□ -2.38
H2-M11F6U8V3 Mir224-201ENSMUST00000083608 82 ntBASIC0.19□□□□□ -2.38
H2-M11F6U8V3 Gm22319-201ENSMUST00000157147 122 ntBASIC0.18□□□□□ -2.38
H2-M11F6U8V3 Gm24686-201ENSMUST00000157755 93 ntBASIC0.18□□□□□ -2.38
H2-M11F6U8V3 Gm22089-201ENSMUST00000158336 102 ntBASIC0.18□□□□□ -2.38
H2-M11F6U8V3 Gm22503-201ENSMUST00000158983 115 ntBASIC0.18□□□□□ -2.38
H2-M11F6U8V3 Gm27717-201ENSMUST00000183933 151 ntBASIC0.18□□□□□ -2.38
H2-M11F6U8V3 Gm27943-201ENSMUST00000184844 116 ntBASIC0.18□□□□□ -2.38
H2-M11F6U8V3 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
H2-M11F6U8V3 Gm24208-201ENSMUST00000082783 135 ntBASIC0.18□□□□□ -2.38
H2-M11F6U8V3 Snord80-201ENSMUST00000083801 81 ntBASIC0.18□□□□□ -2.38
H2-M11F6U8V3 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.17□□□□□ -2.38
H2-M11F6U8V3 Gm23821-201ENSMUST00000158738 106 ntBASIC0.17□□□□□ -2.38
H2-M11F6U8V3 Gm26712-201ENSMUST00000180813 217 ntBASIC0.17□□□□□ -2.38
H2-M11F6U8V3 Gm44327-201ENSMUST00000200068 117 ntBASIC0.17□□□□□ -2.38
H2-M11F6U8V3 Gm45429-201ENSMUST00000209527 172 ntBASIC0.17□□□□□ -2.38
H2-M11F6U8V3 mt-Tt-201ENSMUST00000082422 67 ntBASIC0.17□□□□□ -2.38
H2-M11F6U8V3 Gm22652-201ENSMUST00000083207 131 ntBASIC0.17□□□□□ -2.38
H2-M11F6U8V3 Gm25629-201ENSMUST00000084001 107 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 676.9 ms