Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Mir471-201ENSMUST00000093596 67 ntBASIC-0.08□□□□□ -2.42
Upk3aQ9JKX8 Gm21940-201ENSMUST00000204940 2278 ntBASIC-0.09□□□□□ -2.42
Upk3aQ9JKX8 Mir3473d-201ENSMUST00000175346 81 ntBASIC-0.09□□□□□ -2.42
Upk3aQ9JKX8 Gm22259-201ENSMUST00000178926 107 ntBASIC-0.09□□□□□ -2.42
Upk3aQ9JKX8 Gm44327-201ENSMUST00000200068 117 ntBASIC-0.09□□□□□ -2.42
Upk3aQ9JKX8 AC154390.1-201ENSMUST00000225629 277 ntBASIC-0.09□□□□□ -2.42
Upk3aQ9JKX8 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.09□□□□□ -2.42
Upk3aQ9JKX8 n-R5s96-201ENSMUST00000082574 124 ntBASIC-0.09□□□□□ -2.42
Upk3aQ9JKX8 Gm22981-201ENSMUST00000082611 75 ntBASIC-0.09□□□□□ -2.42
Upk3aQ9JKX8 Gm23036-201ENSMUST00000157885 99 ntBASIC-0.1□□□□□ -2.43
Upk3aQ9JKX8 Gm23994-201ENSMUST00000158059 88 ntBASIC-0.1□□□□□ -2.43
Upk3aQ9JKX8 Gm22606-201ENSMUST00000158290 103 ntBASIC-0.1□□□□□ -2.43
Upk3aQ9JKX8 Gm17020-201ENSMUST00000172274 274 ntBASIC-0.1□□□□□ -2.43
Upk3aQ9JKX8 Gm26097-201ENSMUST00000179642 93 ntBASIC-0.1□□□□□ -2.43
Upk3aQ9JKX8 Gm23509-201ENSMUST00000083080 160 ntBASIC-0.1□□□□□ -2.43
Upk3aQ9JKX8 Gm23461-201ENSMUST00000083265 107 ntBASIC-0.1□□□□□ -2.43
Upk3aQ9JKX8 Gm25006-201ENSMUST00000083813 107 ntBASIC-0.1□□□□□ -2.43
Upk3aQ9JKX8 Gm25629-201ENSMUST00000084001 107 ntBASIC-0.1□□□□□ -2.43
Upk3aQ9JKX8 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
Upk3aQ9JKX8 Gm25309-201ENSMUST00000116728 126 ntBASIC-0.11□□□□□ -2.43
Upk3aQ9JKX8 Gm25056-201ENSMUST00000157372 62 ntBASIC-0.11□□□□□ -2.43
Upk3aQ9JKX8 Mir5124a-201ENSMUST00000175528 72 ntBASIC-0.11□□□□□ -2.43
Upk3aQ9JKX8 Gm44602-201ENSMUST00000205948 132 ntBASIC-0.11□□□□□ -2.43
Upk3aQ9JKX8 Gm26202-201ENSMUST00000082910 65 ntBASIC-0.11□□□□□ -2.43
Upk3aQ9JKX8 Snord85-201ENSMUST00000083262 73 ntBASIC-0.11□□□□□ -2.43
Upk3aQ9JKX8 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.11□□□□□ -2.43
Upk3aQ9JKX8 Gm23661-201ENSMUST00000122630 87 ntBASIC-0.12□□□□□ -2.43
Upk3aQ9JKX8 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC-0.12□□□□□ -2.43
Upk3aQ9JKX8 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.12□□□□□ -2.43
Upk3aQ9JKX8 Gm25161-201ENSMUST00000158913 132 ntBASIC-0.12□□□□□ -2.43
Upk3aQ9JKX8 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-0.12□□□□□ -2.43
Upk3aQ9JKX8 Gm22967-201ENSMUST00000157956 239 ntBASIC-0.13□□□□□ -2.43
Upk3aQ9JKX8 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.13□□□□□ -2.43
Upk3aQ9JKX8 Mir672-201ENSMUST00000102331 100 ntBASIC-0.14□□□□□ -2.43
Upk3aQ9JKX8 Gm23708-201ENSMUST00000104367 123 ntBASIC-0.14□□□□□ -2.43
Upk3aQ9JKX8 Gm23253-201ENSMUST00000157441 104 ntBASIC-0.14□□□□□ -2.43
Upk3aQ9JKX8 Gm23278-201ENSMUST00000157911 143 ntBASIC-0.14□□□□□ -2.43
Upk3aQ9JKX8 Gm24073-201ENSMUST00000158177 106 ntBASIC-0.14□□□□□ -2.43
Upk3aQ9JKX8 Gm22989-201ENSMUST00000158313 86 ntBASIC-0.14□□□□□ -2.43
Upk3aQ9JKX8 Gm23180-201ENSMUST00000158686 125 ntBASIC-0.14□□□□□ -2.43
Upk3aQ9JKX8 Gm22139-201ENSMUST00000158747 105 ntBASIC-0.14□□□□□ -2.43
Upk3aQ9JKX8 Gm27297-201ENSMUST00000183395 105 ntBASIC-0.14□□□□□ -2.43
Upk3aQ9JKX8 Gm43927-201ENSMUST00000204599 117 ntBASIC-0.14□□□□□ -2.43
Upk3aQ9JKX8 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.14□□□□□ -2.43
Upk3aQ9JKX8 Gm24009-201ENSMUST00000157734 93 ntBASIC-0.15□□□□□ -2.43
Upk3aQ9JKX8 Gm37545-201ENSMUST00000186512 148 ntBASIC-0.15□□□□□ -2.43
Upk3aQ9JKX8 Gm22509-201ENSMUST00000082775 107 ntBASIC-0.15□□□□□ -2.43
Upk3aQ9JKX8 Gm23445-201ENSMUST00000082800 107 ntBASIC-0.15□□□□□ -2.43
Upk3aQ9JKX8 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.16□□□□□ -2.44
Upk3aQ9JKX8 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC-0.16□□□□□ -2.44
Upk3aQ9JKX8 Gm11694-201ENSMUST00000118637 159 ntBASIC-0.16□□□□□ -2.44
Upk3aQ9JKX8 Gm25885-201ENSMUST00000157779 109 ntBASIC-0.16□□□□□ -2.44
Upk3aQ9JKX8 Gm22788-201ENSMUST00000157876 61 ntBASIC-0.16□□□□□ -2.44
Upk3aQ9JKX8 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.16□□□□□ -2.44
Upk3aQ9JKX8 Mir216b-201ENSMUST00000102363 86 ntBASIC-0.17□□□□□ -2.44
Upk3aQ9JKX8 Mir764-201ENSMUST00000103259 108 ntBASIC-0.17□□□□□ -2.44
Upk3aQ9JKX8 Mir669f-201ENSMUST00000103850 121 ntBASIC-0.17□□□□□ -2.44
Upk3aQ9JKX8 Gm26011-201ENSMUST00000104410 104 ntBASIC-0.17□□□□□ -2.44
Upk3aQ9JKX8 Gm23788-201ENSMUST00000122535 106 ntBASIC-0.17□□□□□ -2.44
Upk3aQ9JKX8 Gm24884-201ENSMUST00000158784 119 ntBASIC-0.17□□□□□ -2.44
Upk3aQ9JKX8 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.17□□□□□ -2.44
Upk3aQ9JKX8 Gm27607-201ENSMUST00000185162 122 ntBASIC-0.17□□□□□ -2.44
Upk3aQ9JKX8 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.17□□□□□ -2.44
Upk3aQ9JKX8 Gm24445-201ENSMUST00000083981 107 ntBASIC-0.17□□□□□ -2.44
Upk3aQ9JKX8 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.18□□□□□ -2.44
Upk3aQ9JKX8 Gm22373-201ENSMUST00000104584 89 ntBASIC-0.18□□□□□ -2.44
Upk3aQ9JKX8 Traj61-201ENSMUST00000165025 72 ntBASIC-0.18□□□□□ -2.44
Upk3aQ9JKX8 AC124687.1-201ENSMUST00000221868 189 ntBASIC-0.18□□□□□ -2.44
Upk3aQ9JKX8 Gm25756-201ENSMUST00000103990 136 ntBASIC-0.19□□□□□ -2.44
Upk3aQ9JKX8 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC-0.19□□□□□ -2.44
Upk3aQ9JKX8 Mir191-201ENSMUST00000196210 74 ntBASIC-0.19□□□□□ -2.44
Upk3aQ9JKX8 Gm44338-201ENSMUST00000198614 110 ntBASIC-0.19□□□□□ -2.44
Upk3aQ9JKX8 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.19□□□□□ -2.44
Upk3aQ9JKX8 mt-Tc-201ENSMUST00000082400 66 ntBASIC-0.19□□□□□ -2.44
Upk3aQ9JKX8 Gm24246-201ENSMUST00000157315 132 ntBASIC-0.2□□□□□ -2.44
Upk3aQ9JKX8 Gm24054-201ENSMUST00000158619 105 ntBASIC-0.2□□□□□ -2.44
Upk3aQ9JKX8 Gm23020-201ENSMUST00000158766 253 ntBASIC-0.2□□□□□ -2.44
Upk3aQ9JKX8 Gm25307-201ENSMUST00000158885 106 ntBASIC-0.2□□□□□ -2.44
Upk3aQ9JKX8 Mir466b-1-201ENSMUST00000177988 82 ntBASIC-0.2□□□□□ -2.44
Upk3aQ9JKX8 Gm26092-201ENSMUST00000179798 97 ntBASIC-0.2□□□□□ -2.44
Upk3aQ9JKX8 Mir669a-1-201ENSMUST00000180238 97 ntBASIC-0.2□□□□□ -2.44
Upk3aQ9JKX8 Mir3967-201ENSMUST00000198710 68 ntBASIC-0.2□□□□□ -2.44
Upk3aQ9JKX8 Gm23749-201ENSMUST00000104223 131 ntBASIC-0.21□□□□□ -2.44
Upk3aQ9JKX8 Gm22337-201ENSMUST00000157721 132 ntBASIC-0.21□□□□□ -2.44
Upk3aQ9JKX8 Gm22962-201ENSMUST00000157962 73 ntBASIC-0.21□□□□□ -2.44
Upk3aQ9JKX8 Gm24131-201ENSMUST00000158539 107 ntBASIC-0.21□□□□□ -2.44
Upk3aQ9JKX8 Mir1966-201ENSMUST00000158807 108 ntBASIC-0.21□□□□□ -2.44
Upk3aQ9JKX8 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.21□□□□□ -2.44
Upk3aQ9JKX8 Gm22699-201ENSMUST00000175376 105 ntBASIC-0.21□□□□□ -2.44
Upk3aQ9JKX8 Gm29432-201ENSMUST00000185397 139 ntBASIC-0.21□□□□□ -2.44
Upk3aQ9JKX8 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.21□□□□□ -2.44
Upk3aQ9JKX8 Gm23947-201ENSMUST00000093636 107 ntBASIC-0.21□□□□□ -2.44
Upk3aQ9JKX8 Gm23654-201ENSMUST00000116758 126 ntBASIC-0.22□□□□□ -2.44
Upk3aQ9JKX8 Gm24288-201ENSMUST00000157630 144 ntBASIC-0.22□□□□□ -2.44
Upk3aQ9JKX8 Mir21c-201ENSMUST00000184910 78 ntBASIC-0.22□□□□□ -2.44
Upk3aQ9JKX8 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.22□□□□□ -2.44
Upk3aQ9JKX8 Snord90-201ENSMUST00000104568 111 ntBASIC-0.23□□□□□ -2.45
Upk3aQ9JKX8 Gm22100-201ENSMUST00000157926 63 ntBASIC-0.23□□□□□ -2.45
Upk3aQ9JKX8 Gm22087-201ENSMUST00000158339 88 ntBASIC-0.23□□□□□ -2.45
Upk3aQ9JKX8 Gm23209-201ENSMUST00000158667 110 ntBASIC-0.23□□□□□ -2.45
Retrieved 100 of 76,532 protein–RNA pairs in 223.5 ms