Protein–RNA interactions for Protein: Q9JKS4

Ldb3, LIM domain-binding protein 3, mousemouse

Known RBP Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3Q9JKS4 Gm24399-201ENSMUST00000157869 74 ntBASIC1.43□□□□□ -2.18
Ldb3Q9JKS4 Gm24728-201ENSMUST00000158226 125 ntBASIC1.43□□□□□ -2.18
Ldb3Q9JKS4 Gm27248-201ENSMUST00000184004 166 ntBASIC1.43□□□□□ -2.18
Ldb3Q9JKS4 Gm45197-201ENSMUST00000205288 151 ntBASIC1.43□□□□□ -2.18
Ldb3Q9JKS4 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Ldb3Q9JKS4 Gm15115-201ENSMUST00000121145 264 ntBASIC1.42□□□□□ -2.18
Ldb3Q9JKS4 Gm25014-201ENSMUST00000158401 103 ntBASIC1.42□□□□□ -2.18
Ldb3Q9JKS4 Gm25958-201ENSMUST00000175114 71 ntBASIC1.42□□□□□ -2.18
Ldb3Q9JKS4 Mir6351-201ENSMUST00000183826 99 ntBASIC1.42□□□□□ -2.18
Ldb3Q9JKS4 Gm44602-201ENSMUST00000205948 132 ntBASIC1.42□□□□□ -2.18
Ldb3Q9JKS4 Gm45754-201ENSMUST00000212380 279 ntBASIC1.42□□□□□ -2.18
Ldb3Q9JKS4 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.42□□□□□ -2.18
Ldb3Q9JKS4 Gm24406-201ENSMUST00000083026 128 ntBASIC1.42□□□□□ -2.18
Ldb3Q9JKS4 Gm24494-201ENSMUST00000083804 81 ntBASIC1.42□□□□□ -2.18
Ldb3Q9JKS4 Gm25068-201ENSMUST00000103895 110 ntBASIC1.41□□□□□ -2.18
Ldb3Q9JKS4 Gm11694-201ENSMUST00000118637 159 ntBASIC1.41□□□□□ -2.18
Ldb3Q9JKS4 Gm24183-201ENSMUST00000122572 93 ntBASIC1.41□□□□□ -2.18
Ldb3Q9JKS4 Gm25229-201ENSMUST00000178587 79 ntBASIC1.41□□□□□ -2.18
Ldb3Q9JKS4 Gm26441-201ENSMUST00000082590 104 ntBASIC1.41□□□□□ -2.18
Ldb3Q9JKS4 Snord60-201ENSMUST00000082834 78 ntBASIC1.41□□□□□ -2.18
Ldb3Q9JKS4 Mir320-201ENSMUST00000083594 82 ntBASIC1.41□□□□□ -2.18
Ldb3Q9JKS4 Gm23482-201ENSMUST00000104172 122 ntBASIC1.4□□□□□ -2.19
Ldb3Q9JKS4 Gm23881-201ENSMUST00000116872 66 ntBASIC1.4□□□□□ -2.19
Ldb3Q9JKS4 Gm24915-201ENSMUST00000157288 78 ntBASIC1.4□□□□□ -2.19
Ldb3Q9JKS4 Gm23715-201ENSMUST00000157354 106 ntBASIC1.4□□□□□ -2.19
Ldb3Q9JKS4 Gm25901-201ENSMUST00000158494 130 ntBASIC1.4□□□□□ -2.19
Ldb3Q9JKS4 Gm22140-201ENSMUST00000158745 120 ntBASIC1.4□□□□□ -2.19
Ldb3Q9JKS4 Mir7225-201ENSMUST00000184178 54 ntBASIC1.4□□□□□ -2.19
Ldb3Q9JKS4 Gm3702-201ENSMUST00000211754 346 ntBASIC1.4□□□□□ -2.19
Ldb3Q9JKS4 Gm20108-201ENSMUST00000219977 153 ntBASIC1.4□□□□□ -2.19
Ldb3Q9JKS4 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Ldb3Q9JKS4 Mir873a-201ENSMUST00000104863 77 ntBASIC1.39□□□□□ -2.19
Ldb3Q9JKS4 Gm12469-201ENSMUST00000117623 207 ntBASIC1.39□□□□□ -2.19
Ldb3Q9JKS4 n-R5s70-201ENSMUST00000122650 116 ntBASIC1.39□□□□□ -2.19
Ldb3Q9JKS4 Gm23900-201ENSMUST00000157569 108 ntBASIC1.39□□□□□ -2.19
Ldb3Q9JKS4 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Ldb3Q9JKS4 Gm22082-201ENSMUST00000157587 161 ntBASIC1.38□□□□□ -2.19
Ldb3Q9JKS4 Gm22164-201ENSMUST00000158413 106 ntBASIC1.38□□□□□ -2.19
Ldb3Q9JKS4 Gm22801-201ENSMUST00000175624 84 ntBASIC1.38□□□□□ -2.19
Ldb3Q9JKS4 Gm25936-201ENSMUST00000179952 114 ntBASIC1.38□□□□□ -2.19
Ldb3Q9JKS4 Gm22785-201ENSMUST00000104087 132 ntBASIC1.37□□□□□ -2.19
Ldb3Q9JKS4 Gm23528-201ENSMUST00000104571 132 ntBASIC1.37□□□□□ -2.19
Ldb3Q9JKS4 Gm23670-201ENSMUST00000157469 119 ntBASIC1.37□□□□□ -2.19
Ldb3Q9JKS4 Gm24674-201ENSMUST00000179194 104 ntBASIC1.37□□□□□ -2.19
Ldb3Q9JKS4 Gm27639-201ENSMUST00000184937 85 ntBASIC1.37□□□□□ -2.19
Ldb3Q9JKS4 Gm24527-201ENSMUST00000082920 107 ntBASIC1.37□□□□□ -2.19
Ldb3Q9JKS4 Gm23377-201ENSMUST00000082943 126 ntBASIC1.37□□□□□ -2.19
Ldb3Q9JKS4 Gm24203-201ENSMUST00000082949 114 ntBASIC1.37□□□□□ -2.19
Ldb3Q9JKS4 Gm22750-201ENSMUST00000102076 103 ntBASIC1.36□□□□□ -2.19
Ldb3Q9JKS4 Gm22544-201ENSMUST00000104349 127 ntBASIC1.36□□□□□ -2.19
Ldb3Q9JKS4 Gm25110-201ENSMUST00000116684 121 ntBASIC1.36□□□□□ -2.19
Ldb3Q9JKS4 Gm25775-201ENSMUST00000116716 121 ntBASIC1.36□□□□□ -2.19
Ldb3Q9JKS4 Gm24795-201ENSMUST00000116737 121 ntBASIC1.36□□□□□ -2.19
Ldb3Q9JKS4 Gm25171-201ENSMUST00000116926 121 ntBASIC1.36□□□□□ -2.19
Ldb3Q9JKS4 Gm22677-201ENSMUST00000116977 108 ntBASIC1.36□□□□□ -2.19
Ldb3Q9JKS4 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC1.36□□□□□ -2.19
Ldb3Q9JKS4 Gm26133-201ENSMUST00000157363 100 ntBASIC1.36□□□□□ -2.19
Ldb3Q9JKS4 Gm24222-201ENSMUST00000158834 93 ntBASIC1.36□□□□□ -2.19
Ldb3Q9JKS4 Gm22862-201ENSMUST00000178593 121 ntBASIC1.36□□□□□ -2.19
Ldb3Q9JKS4 Gm27686-201ENSMUST00000185123 91 ntBASIC1.36□□□□□ -2.19
Ldb3Q9JKS4 Gm44396-201ENSMUST00000199843 114 ntBASIC1.36□□□□□ -2.19
Ldb3Q9JKS4 Mir410-201ENSMUST00000083563 81 ntBASIC1.36□□□□□ -2.19
Ldb3Q9JKS4 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
Ldb3Q9JKS4 Gm25992-201ENSMUST00000102437 109 ntBASIC1.35□□□□□ -2.19
Ldb3Q9JKS4 Gm25061-201ENSMUST00000104665 107 ntBASIC1.35□□□□□ -2.19
Ldb3Q9JKS4 Gm24686-201ENSMUST00000157755 93 ntBASIC1.35□□□□□ -2.19
Ldb3Q9JKS4 Gm23558-201ENSMUST00000157823 80 ntBASIC1.35□□□□□ -2.19
Ldb3Q9JKS4 Mir1961-201ENSMUST00000158643 112 ntBASIC1.35□□□□□ -2.19
Ldb3Q9JKS4 Mir6390-201ENSMUST00000184405 129 ntBASIC1.35□□□□□ -2.19
Ldb3Q9JKS4 Mir7118-201ENSMUST00000197760 61 ntBASIC1.35□□□□□ -2.19
Ldb3Q9JKS4 AC159885.1-201ENSMUST00000222221 199 ntBASIC1.35□□□□□ -2.19
Ldb3Q9JKS4 Gm22458-201ENSMUST00000082576 107 ntBASIC1.35□□□□□ -2.19
Ldb3Q9JKS4 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.35□□□□□ -2.19
Ldb3Q9JKS4 Gm25629-201ENSMUST00000084001 107 ntBASIC1.35□□□□□ -2.19
Ldb3Q9JKS4 Gm24588-201ENSMUST00000116696 83 ntBASIC1.34□□□□□ -2.19
Ldb3Q9JKS4 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.34□□□□□ -2.19
Ldb3Q9JKS4 Gm22603-201ENSMUST00000157603 96 ntBASIC1.34□□□□□ -2.19
Ldb3Q9JKS4 Gm22099-201ENSMUST00000157925 123 ntBASIC1.34□□□□□ -2.19
Ldb3Q9JKS4 Gm27975-201ENSMUST00000184400 101 ntBASIC1.34□□□□□ -2.19
Ldb3Q9JKS4 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Ldb3Q9JKS4 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.34□□□□□ -2.19
Ldb3Q9JKS4 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
Ldb3Q9JKS4 Gm24593-201ENSMUST00000122507 106 ntBASIC1.33□□□□□ -2.2
Ldb3Q9JKS4 Gm23661-201ENSMUST00000122630 87 ntBASIC1.33□□□□□ -2.2
Ldb3Q9JKS4 Gm24384-201ENSMUST00000122693 75 ntBASIC1.33□□□□□ -2.2
Ldb3Q9JKS4 Gm24262-201ENSMUST00000157431 144 ntBASIC1.33□□□□□ -2.2
Ldb3Q9JKS4 Gm23114-201ENSMUST00000158478 117 ntBASIC1.33□□□□□ -2.2
Ldb3Q9JKS4 Gm24638-201ENSMUST00000179807 132 ntBASIC1.33□□□□□ -2.2
Ldb3Q9JKS4 Snord96a-201ENSMUST00000082791 81 ntBASIC1.33□□□□□ -2.2
Ldb3Q9JKS4 Gm25696-201ENSMUST00000082900 105 ntBASIC1.33□□□□□ -2.2
Ldb3Q9JKS4 Gm22753-201ENSMUST00000083657 107 ntBASIC1.33□□□□□ -2.2
Ldb3Q9JKS4 Mir709-201ENSMUST00000102190 88 ntBASIC1.32□□□□□ -2.2
Ldb3Q9JKS4 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Ldb3Q9JKS4 Gm24476-201ENSMUST00000157437 131 ntBASIC1.32□□□□□ -2.2
Ldb3Q9JKS4 Gm23857-201ENSMUST00000158379 111 ntBASIC1.32□□□□□ -2.2
Ldb3Q9JKS4 Gm25831-201ENSMUST00000158924 163 ntBASIC1.32□□□□□ -2.2
Ldb3Q9JKS4 Gm10548-202ENSMUST00000165672 272 ntBASIC1.32□□□□□ -2.2
Ldb3Q9JKS4 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.32□□□□□ -2.2
Ldb3Q9JKS4 Gm44469-201ENSMUST00000198558 79 ntBASIC1.32□□□□□ -2.2
Ldb3Q9JKS4 Gm44488-201ENSMUST00000199467 119 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 186.2 ms