Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.43□□□□□ -2.34
Scn5aQ9JJV9 Gm22336-201ENSMUST00000157719 107 ntBASIC0.43□□□□□ -2.34
Scn5aQ9JJV9 Gm24678-201ENSMUST00000158756 104 ntBASIC0.43□□□□□ -2.34
Scn5aQ9JJV9 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.43□□□□□ -2.34
Scn5aQ9JJV9 Mir6928-201ENSMUST00000185166 70 ntBASIC0.43□□□□□ -2.34
Scn5aQ9JJV9 Scarna9-201ENSMUST00000104318 70 ntBASIC0.42□□□□□ -2.34
Scn5aQ9JJV9 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.42□□□□□ -2.34
Scn5aQ9JJV9 Gm24476-201ENSMUST00000157437 131 ntBASIC0.42□□□□□ -2.34
Scn5aQ9JJV9 Gm27792-201ENSMUST00000184031 115 ntBASIC0.42□□□□□ -2.34
Scn5aQ9JJV9 Trbv25-201ENSMUST00000194700 273 ntBASIC0.42□□□□□ -2.34
Scn5aQ9JJV9 Gm44345-201ENSMUST00000199560 135 ntBASIC0.42□□□□□ -2.34
Scn5aQ9JJV9 Gm44470-201ENSMUST00000203913 142 ntBASIC0.42□□□□□ -2.34
Scn5aQ9JJV9 Gm23301-201ENSMUST00000082713 65 ntBASIC0.42□□□□□ -2.34
Scn5aQ9JJV9 Gm25814-201ENSMUST00000082754 107 ntBASIC0.42□□□□□ -2.34
Scn5aQ9JJV9 Mir669f-201ENSMUST00000103850 121 ntBASIC0.42□□□□□ -2.34
Scn5aQ9JJV9 Gm24509-201ENSMUST00000157086 101 ntBASIC0.42□□□□□ -2.34
Scn5aQ9JJV9 Gm25358-201ENSMUST00000157189 101 ntBASIC0.42□□□□□ -2.34
Scn5aQ9JJV9 Gm22983-201ENSMUST00000158308 104 ntBASIC0.42□□□□□ -2.34
Scn5aQ9JJV9 Gm26498-201ENSMUST00000177799 79 ntBASIC0.42□□□□□ -2.34
Scn5aQ9JJV9 Gm26230-201ENSMUST00000180141 79 ntBASIC0.42□□□□□ -2.34
Scn5aQ9JJV9 Gm22349-201ENSMUST00000157864 107 ntBASIC0.41□□□□□ -2.34
Scn5aQ9JJV9 Gm43432-201ENSMUST00000196352 121 ntBASIC0.41□□□□□ -2.34
Scn5aQ9JJV9 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC0.41□□□□□ -2.34
Scn5aQ9JJV9 Gm23881-201ENSMUST00000116872 66 ntBASIC0.4□□□□□ -2.34
Scn5aQ9JJV9 Gm24648-201ENSMUST00000157111 132 ntBASIC0.4□□□□□ -2.34
Scn5aQ9JJV9 Gm25600-201ENSMUST00000158357 106 ntBASIC0.4□□□□□ -2.34
Scn5aQ9JJV9 Gm26158-201ENSMUST00000158973 119 ntBASIC0.4□□□□□ -2.34
Scn5aQ9JJV9 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.4□□□□□ -2.34
Scn5aQ9JJV9 Gm22297-201ENSMUST00000083312 106 ntBASIC0.4□□□□□ -2.34
Scn5aQ9JJV9 Gm26011-201ENSMUST00000104410 104 ntBASIC0.4□□□□□ -2.35
Scn5aQ9JJV9 Gm20734-201ENSMUST00000216939 193 ntBASIC0.4□□□□□ -2.35
Scn5aQ9JJV9 AC124687.1-201ENSMUST00000221868 189 ntBASIC0.4□□□□□ -2.35
Scn5aQ9JJV9 Snord33-201ENSMUST00000083694 84 ntBASIC0.4□□□□□ -2.35
Scn5aQ9JJV9 Gm25629-201ENSMUST00000084001 107 ntBASIC0.4□□□□□ -2.35
Scn5aQ9JJV9 Gm25915-201ENSMUST00000104265 126 ntBASIC0.39□□□□□ -2.35
Scn5aQ9JJV9 Gm24683-201ENSMUST00000104840 88 ntBASIC0.39□□□□□ -2.35
Scn5aQ9JJV9 Gm26291-201ENSMUST00000158889 137 ntBASIC0.39□□□□□ -2.35
Scn5aQ9JJV9 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.39□□□□□ -2.35
Scn5aQ9JJV9 Gm22652-201ENSMUST00000083207 131 ntBASIC0.39□□□□□ -2.35
Scn5aQ9JJV9 Gm22759-201ENSMUST00000102276 96 ntBASIC0.38□□□□□ -2.35
Scn5aQ9JJV9 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.38□□□□□ -2.35
Scn5aQ9JJV9 Gm26152-201ENSMUST00000157427 101 ntBASIC0.38□□□□□ -2.35
Scn5aQ9JJV9 Gm26337-201ENSMUST00000178000 79 ntBASIC0.38□□□□□ -2.35
Scn5aQ9JJV9 Mir21c-201ENSMUST00000184910 78 ntBASIC0.38□□□□□ -2.35
Scn5aQ9JJV9 mt-Tt-201ENSMUST00000082422 67 ntBASIC0.38□□□□□ -2.35
Scn5aQ9JJV9 Gm22303-201ENSMUST00000082686 122 ntBASIC0.38□□□□□ -2.35
Scn5aQ9JJV9 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.38□□□□□ -2.35
Scn5aQ9JJV9 Gm14884-201ENSMUST00000120456 196 ntBASIC0.38□□□□□ -2.35
Scn5aQ9JJV9 Gm24913-201ENSMUST00000157286 107 ntBASIC0.38□□□□□ -2.35
Scn5aQ9JJV9 Gm23994-201ENSMUST00000158059 88 ntBASIC0.38□□□□□ -2.35
Scn5aQ9JJV9 Gm38298-201ENSMUST00000193578 118 ntBASIC0.38□□□□□ -2.35
Scn5aQ9JJV9 Gm23509-201ENSMUST00000083080 160 ntBASIC0.38□□□□□ -2.35
Scn5aQ9JJV9 Gm23969-201ENSMUST00000083324 74 ntBASIC0.38□□□□□ -2.35
Scn5aQ9JJV9 Mir670-201ENSMUST00000102380 100 ntBASIC0.37□□□□□ -2.35
Scn5aQ9JJV9 Gm23482-201ENSMUST00000104172 122 ntBASIC0.37□□□□□ -2.35
Scn5aQ9JJV9 Gm26018-201ENSMUST00000104406 128 ntBASIC0.37□□□□□ -2.35
Scn5aQ9JJV9 Gm22030-201ENSMUST00000116942 63 ntBASIC0.37□□□□□ -2.35
Scn5aQ9JJV9 Gm14502-201ENSMUST00000118154 113 ntBASIC0.37□□□□□ -2.35
Scn5aQ9JJV9 n-R5s39-201ENSMUST00000122613 108 ntBASIC0.37□□□□□ -2.35
Scn5aQ9JJV9 Gm25393-201ENSMUST00000157336 285 ntBASIC0.37□□□□□ -2.35
Scn5aQ9JJV9 Gm25014-201ENSMUST00000158401 103 ntBASIC0.37□□□□□ -2.35
Scn5aQ9JJV9 Gm25071-201ENSMUST00000175232 70 ntBASIC0.37□□□□□ -2.35
Scn5aQ9JJV9 Mir669j-201ENSMUST00000179023 121 ntBASIC0.37□□□□□ -2.35
Scn5aQ9JJV9 Gm22451-201ENSMUST00000122803 151 ntBASIC0.37□□□□□ -2.35
Scn5aQ9JJV9 Gm22638-201ENSMUST00000179674 107 ntBASIC0.37□□□□□ -2.35
Scn5aQ9JJV9 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.37□□□□□ -2.35
Scn5aQ9JJV9 Gm25623-201ENSMUST00000157216 108 ntBASIC0.36□□□□□ -2.35
Scn5aQ9JJV9 Gm22966-201ENSMUST00000157957 129 ntBASIC0.36□□□□□ -2.35
Scn5aQ9JJV9 Gm25300-201ENSMUST00000175284 84 ntBASIC0.36□□□□□ -2.35
Scn5aQ9JJV9 Gm27851-201ENSMUST00000183529 63 ntBASIC0.36□□□□□ -2.35
Scn5aQ9JJV9 Gm25974-201ENSMUST00000158701 94 ntBASIC0.35□□□□□ -2.35
Scn5aQ9JJV9 Gm26116-201ENSMUST00000175600 77 ntBASIC0.35□□□□□ -2.35
Scn5aQ9JJV9 Gm23291-201ENSMUST00000175611 78 ntBASIC0.35□□□□□ -2.35
Scn5aQ9JJV9 Gm3702-201ENSMUST00000211754 346 ntBASIC0.35□□□□□ -2.35
Scn5aQ9JJV9 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.35□□□□□ -2.35
Scn5aQ9JJV9 Gm23601-201ENSMUST00000157259 131 ntBASIC0.35□□□□□ -2.35
Scn5aQ9JJV9 Gm22558-201ENSMUST00000157326 95 ntBASIC0.35□□□□□ -2.35
Scn5aQ9JJV9 Gm24575-201ENSMUST00000175502 77 ntBASIC0.35□□□□□ -2.35
Scn5aQ9JJV9 Gm27943-201ENSMUST00000184844 116 ntBASIC0.35□□□□□ -2.35
Scn5aQ9JJV9 Gm10351-201ENSMUST00000087694 125 ntBASIC0.35□□□□□ -2.35
Scn5aQ9JJV9 Gm26091-201ENSMUST00000122704 82 ntBASIC0.34□□□□□ -2.36
Scn5aQ9JJV9 Gm26398-201ENSMUST00000179015 127 ntBASIC0.34□□□□□ -2.36
Scn5aQ9JJV9 Gm22286-201ENSMUST00000179708 107 ntBASIC0.34□□□□□ -2.36
Scn5aQ9JJV9 Gm27289-201ENSMUST00000183341 82 ntBASIC0.34□□□□□ -2.36
Scn5aQ9JJV9 Gm28767-201ENSMUST00000188601 114 ntBASIC0.34□□□□□ -2.36
Scn5aQ9JJV9 Mir376b-201ENSMUST00000195930 82 ntBASIC0.34□□□□□ -2.36
Scn5aQ9JJV9 Mir6896-201ENSMUST00000198033 73 ntBASIC0.34□□□□□ -2.36
Scn5aQ9JJV9 Gm44828-201ENSMUST00000203745 106 ntBASIC0.34□□□□□ -2.36
Scn5aQ9JJV9 Gm16186-201ENSMUST00000120132 216 ntBASIC0.33□□□□□ -2.36
Scn5aQ9JJV9 Gm24894-201ENSMUST00000122744 118 ntBASIC0.33□□□□□ -2.36
Scn5aQ9JJV9 Gm26412-201ENSMUST00000157666 55 ntBASIC0.33□□□□□ -2.36
Scn5aQ9JJV9 Gm23416-201ENSMUST00000175520 95 ntBASIC0.33□□□□□ -2.36
Scn5aQ9JJV9 Gm27297-201ENSMUST00000183395 105 ntBASIC0.33□□□□□ -2.36
Scn5aQ9JJV9 Gm27717-201ENSMUST00000183933 151 ntBASIC0.33□□□□□ -2.36
Scn5aQ9JJV9 Gm45197-201ENSMUST00000205288 151 ntBASIC0.33□□□□□ -2.36
Scn5aQ9JJV9 CT030166.3-201ENSMUST00000223203 193 ntBASIC0.33□□□□□ -2.36
Scn5aQ9JJV9 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
Scn5aQ9JJV9 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.33□□□□□ -2.36
Scn5aQ9JJV9 Gm24030-201ENSMUST00000083931 164 ntBASIC0.33□□□□□ -2.36
Scn5aQ9JJV9 Gm28435-201ENSMUST00000185496 108 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 298.9 ms