Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm45197-201ENSMUST00000205288 151 ntBASIC0.05□□□□□ -2.4
Scn4aQ9ER60 Gm25006-201ENSMUST00000083813 107 ntBASIC0.05□□□□□ -2.4
Scn4aQ9ER60 Gm25629-201ENSMUST00000084001 107 ntBASIC0.05□□□□□ -2.4
Scn4aQ9ER60 Gm24290-201ENSMUST00000157634 96 ntBASIC0.03□□□□□ -2.4
Scn4aQ9ER60 Gm27803-201ENSMUST00000183763 119 ntBASIC0.03□□□□□ -2.4
Scn4aQ9ER60 mt-Td-201ENSMUST00000082404 70 ntBASIC0.03□□□□□ -2.4
Scn4aQ9ER60 Gm24233-201ENSMUST00000104317 122 ntBASIC0.03□□□□□ -2.4
Scn4aQ9ER60 Gm24500-201ENSMUST00000158447 124 ntBASIC0.03□□□□□ -2.4
Scn4aQ9ER60 Gm23821-201ENSMUST00000158738 106 ntBASIC0.03□□□□□ -2.4
Scn4aQ9ER60 Mir6342-201ENSMUST00000183870 125 ntBASIC0.03□□□□□ -2.4
Scn4aQ9ER60 Mir214-201ENSMUST00000083582 110 ntBASIC0.03□□□□□ -2.4
Scn4aQ9ER60 Ighv15-1-201ENSMUST00000194450 276 ntBASIC0.02□□□□□ -2.41
Scn4aQ9ER60 Gm22981-201ENSMUST00000082611 75 ntBASIC0.02□□□□□ -2.41
Scn4aQ9ER60 Gm25136-201ENSMUST00000083253 115 ntBASIC0.02□□□□□ -2.41
Scn4aQ9ER60 Snord85-201ENSMUST00000083262 73 ntBASIC0.02□□□□□ -2.41
Scn4aQ9ER60 Gm24232-201ENSMUST00000104314 132 ntBASIC0.01□□□□□ -2.41
Scn4aQ9ER60 Gm23917-201ENSMUST00000175256 98 ntBASIC0.01□□□□□ -2.41
Scn4aQ9ER60 Gm27297-201ENSMUST00000183395 105 ntBASIC0.01□□□□□ -2.41
Scn4aQ9ER60 Gm24833-201ENSMUST00000116775 120 ntBASIC0.01□□□□□ -2.41
Scn4aQ9ER60 Snora16a-202ENSMUST00000196061 137 ntBASIC0.01□□□□□ -2.41
Scn4aQ9ER60 Snora75-201ENSMUST00000082903 133 ntBASIC0.01□□□□□ -2.41
Scn4aQ9ER60 Mir302d-201ENSMUST00000083513 66 ntBASIC0.01□□□□□ -2.41
Scn4aQ9ER60 Gm25329-201ENSMUST00000158041 126 ntBASIC0□□□□□ -2.41
Scn4aQ9ER60 Gm37545-201ENSMUST00000186512 148 ntBASIC-0.01□□□□□ -2.41
Scn4aQ9ER60 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.01□□□□□ -2.41
Scn4aQ9ER60 Gm25703-201ENSMUST00000083123 151 ntBASIC-0.01□□□□□ -2.41
Scn4aQ9ER60 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.01□□□□□ -2.41
Scn4aQ9ER60 Mir8107-201ENSMUST00000184024 117 ntBASIC-0.01□□□□□ -2.41
Scn4aQ9ER60 Gm22509-201ENSMUST00000082775 107 ntBASIC-0.01□□□□□ -2.41
Scn4aQ9ER60 Mir20b-201ENSMUST00000102087 80 ntBASIC-0.02□□□□□ -2.41
Scn4aQ9ER60 Gm25408-201ENSMUST00000104104 133 ntBASIC-0.02□□□□□ -2.41
Scn4aQ9ER60 Gm26290-201ENSMUST00000158891 145 ntBASIC-0.02□□□□□ -2.41
Scn4aQ9ER60 Gm38208-201ENSMUST00000192476 114 ntBASIC-0.02□□□□□ -2.41
Scn4aQ9ER60 Gm23320-201ENSMUST00000104462 127 ntBASIC-0.03□□□□□ -2.41
Scn4aQ9ER60 Mir6928-201ENSMUST00000185166 70 ntBASIC-0.03□□□□□ -2.41
Scn4aQ9ER60 Mir6375-201ENSMUST00000197176 95 ntBASIC-0.03□□□□□ -2.41
Scn4aQ9ER60 Gm25482-201ENSMUST00000083225 107 ntBASIC-0.03□□□□□ -2.41
Scn4aQ9ER60 Gm25184-201ENSMUST00000157753 163 ntBASIC-0.03□□□□□ -2.42
Scn4aQ9ER60 Gm25654-201ENSMUST00000158467 88 ntBASIC-0.03□□□□□ -2.42
Scn4aQ9ER60 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.03□□□□□ -2.42
Scn4aQ9ER60 Gm25309-201ENSMUST00000116728 126 ntBASIC-0.04□□□□□ -2.42
Scn4aQ9ER60 Gm26426-201ENSMUST00000177866 123 ntBASIC-0.04□□□□□ -2.42
Scn4aQ9ER60 Gm26060-201ENSMUST00000180094 123 ntBASIC-0.04□□□□□ -2.42
Scn4aQ9ER60 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.04□□□□□ -2.42
Scn4aQ9ER60 Gm23258-201ENSMUST00000158319 106 ntBASIC-0.05□□□□□ -2.42
Scn4aQ9ER60 Mir3105-201ENSMUST00000175480 85 ntBASIC-0.05□□□□□ -2.42
Scn4aQ9ER60 Gm23977-201ENSMUST00000177871 74 ntBASIC-0.05□□□□□ -2.42
Scn4aQ9ER60 Mir672-201ENSMUST00000102331 100 ntBASIC-0.06□□□□□ -2.42
Scn4aQ9ER60 Gm22087-201ENSMUST00000158339 88 ntBASIC-0.06□□□□□ -2.42
Scn4aQ9ER60 Gm23788-201ENSMUST00000122535 106 ntBASIC-0.06□□□□□ -2.42
Scn4aQ9ER60 Gm14838-201ENSMUST00000118913 248 ntBASIC-0.07□□□□□ -2.42
Scn4aQ9ER60 Gm25716-201ENSMUST00000158628 104 ntBASIC-0.07□□□□□ -2.42
Scn4aQ9ER60 Gm22973-201ENSMUST00000083298 191 ntBASIC-0.07□□□□□ -2.42
Scn4aQ9ER60 Mir382-201ENSMUST00000083494 76 ntBASIC-0.07□□□□□ -2.42
Scn4aQ9ER60 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.08□□□□□ -2.42
Scn4aQ9ER60 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC-0.08□□□□□ -2.42
Scn4aQ9ER60 Gm24091-201ENSMUST00000082550 83 ntBASIC-0.08□□□□□ -2.42
Scn4aQ9ER60 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.08□□□□□ -2.42
Scn4aQ9ER60 Gm23711-201ENSMUST00000083856 83 ntBASIC-0.08□□□□□ -2.42
Scn4aQ9ER60 Gm24415-201ENSMUST00000180218 107 ntBASIC-0.08□□□□□ -2.42
Scn4aQ9ER60 Gm25040-201ENSMUST00000103877 66 ntBASIC-0.09□□□□□ -2.42
Scn4aQ9ER60 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.09□□□□□ -2.42
Scn4aQ9ER60 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.09□□□□□ -2.42
Scn4aQ9ER60 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
Scn4aQ9ER60 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.1□□□□□ -2.43
Scn4aQ9ER60 Gm26398-201ENSMUST00000179015 127 ntBASIC-0.1□□□□□ -2.43
Scn4aQ9ER60 Gm44338-201ENSMUST00000198614 110 ntBASIC-0.1□□□□□ -2.43
Scn4aQ9ER60 Gm44602-201ENSMUST00000205948 132 ntBASIC-0.1□□□□□ -2.43
Scn4aQ9ER60 Gm25974-201ENSMUST00000158701 94 ntBASIC-0.1□□□□□ -2.43
Scn4aQ9ER60 Snord90-201ENSMUST00000104568 111 ntBASIC-0.11□□□□□ -2.43
Scn4aQ9ER60 Gm22259-201ENSMUST00000178926 107 ntBASIC-0.11□□□□□ -2.43
Scn4aQ9ER60 Gm18665-201ENSMUST00000189783 270 ntBASIC-0.11□□□□□ -2.43
Scn4aQ9ER60 Mir18-201ENSMUST00000083469 96 ntBASIC-0.11□□□□□ -2.43
Scn4aQ9ER60 Gm44489-201ENSMUST00000104619 97 ntBASIC-0.12□□□□□ -2.43
Scn4aQ9ER60 Gm29432-201ENSMUST00000185397 139 ntBASIC-0.12□□□□□ -2.43
Scn4aQ9ER60 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.12□□□□□ -2.43
Scn4aQ9ER60 Gm21940-201ENSMUST00000204940 2278 ntBASIC-0.12□□□□□ -2.43
Scn4aQ9ER60 Gm23253-201ENSMUST00000157441 104 ntBASIC-0.13□□□□□ -2.43
Scn4aQ9ER60 Gm14502-201ENSMUST00000118154 113 ntBASIC-0.13□□□□□ -2.43
Scn4aQ9ER60 Gm26403-201ENSMUST00000158500 105 ntBASIC-0.13□□□□□ -2.43
Scn4aQ9ER60 Gm23291-201ENSMUST00000175611 78 ntBASIC-0.13□□□□□ -2.43
Scn4aQ9ER60 Mir21c-201ENSMUST00000184910 78 ntBASIC-0.13□□□□□ -2.43
Scn4aQ9ER60 Gm42845-201ENSMUST00000197766 105 ntBASIC-0.13□□□□□ -2.43
Scn4aQ9ER60 AC124687.1-201ENSMUST00000221868 189 ntBASIC-0.13□□□□□ -2.43
Scn4aQ9ER60 Gm23509-201ENSMUST00000083080 160 ntBASIC-0.13□□□□□ -2.43
Scn4aQ9ER60 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.13□□□□□ -2.43
Scn4aQ9ER60 Gm26084-201ENSMUST00000157903 104 ntBASIC-0.14□□□□□ -2.43
Scn4aQ9ER60 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.14□□□□□ -2.43
Scn4aQ9ER60 Gm24372-201ENSMUST00000104400 110 ntBASIC-0.15□□□□□ -2.43
Scn4aQ9ER60 Gm13065-201ENSMUST00000119178 141 ntBASIC-0.15□□□□□ -2.43
Scn4aQ9ER60 Gm24648-201ENSMUST00000157111 132 ntBASIC-0.15□□□□□ -2.43
Scn4aQ9ER60 Gm24009-201ENSMUST00000157734 93 ntBASIC-0.15□□□□□ -2.43
Scn4aQ9ER60 Mir1966-201ENSMUST00000158807 108 ntBASIC-0.15□□□□□ -2.43
Scn4aQ9ER60 Gm25307-201ENSMUST00000158885 106 ntBASIC-0.15□□□□□ -2.43
Scn4aQ9ER60 Gm22348-201ENSMUST00000178674 79 ntBASIC-0.15□□□□□ -2.43
Scn4aQ9ER60 Gm44922-201ENSMUST00000206690 90 ntBASIC-0.15□□□□□ -2.43
Scn4aQ9ER60 Gm22105-201ENSMUST00000116734 116 ntBASIC-0.15□□□□□ -2.43
Scn4aQ9ER60 Gm17020-201ENSMUST00000172274 274 ntBASIC-0.15□□□□□ -2.43
Scn4aQ9ER60 Gm23303-201ENSMUST00000082714 152 ntBASIC-0.15□□□□□ -2.43
Scn4aQ9ER60 Gm22788-201ENSMUST00000157876 61 ntBASIC-0.16□□□□□ -2.44
Retrieved 100 of 76,532 protein–RNA pairs in 172.9 ms