Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm24728-201ENSMUST00000158226 125 ntBASIC1.73□□□□□ -2.13
Upf1Q9EPU0 Gm45754-201ENSMUST00000212380 279 ntBASIC1.73□□□□□ -2.13
Upf1Q9EPU0 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Upf1Q9EPU0 Gm22031-201ENSMUST00000116945 126 ntBASIC1.72□□□□□ -2.13
Upf1Q9EPU0 Gm24942-201ENSMUST00000158328 114 ntBASIC1.72□□□□□ -2.13
Upf1Q9EPU0 Gm27420-201ENSMUST00000183823 79 ntBASIC1.72□□□□□ -2.13
Upf1Q9EPU0 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.72□□□□□ -2.13
Upf1Q9EPU0 Mir30c-2-201ENSMUST00000083633 84 ntBASIC1.72□□□□□ -2.13
Upf1Q9EPU0 Gm26358-201ENSMUST00000158215 97 ntBASIC1.71□□□□□ -2.14
Upf1Q9EPU0 Gm25166-201ENSMUST00000158909 111 ntBASIC1.71□□□□□ -2.14
Upf1Q9EPU0 Gm25936-201ENSMUST00000179952 114 ntBASIC1.71□□□□□ -2.14
Upf1Q9EPU0 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.71□□□□□ -2.14
Upf1Q9EPU0 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC1.71□□□□□ -2.14
Upf1Q9EPU0 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Upf1Q9EPU0 Gm25759-201ENSMUST00000103988 129 ntBASIC1.7□□□□□ -2.14
Upf1Q9EPU0 Gm25506-201ENSMUST00000104339 70 ntBASIC1.7□□□□□ -2.14
Upf1Q9EPU0 Gm22089-201ENSMUST00000158336 102 ntBASIC1.7□□□□□ -2.14
Upf1Q9EPU0 Gm23008-201ENSMUST00000158946 80 ntBASIC1.7□□□□□ -2.14
Upf1Q9EPU0 Mir468-201ENSMUST00000197332 78 ntBASIC1.7□□□□□ -2.14
Upf1Q9EPU0 Mir709-201ENSMUST00000102190 88 ntBASIC1.69□□□□□ -2.14
Upf1Q9EPU0 Gm23986-201ENSMUST00000157144 63 ntBASIC1.69□□□□□ -2.14
Upf1Q9EPU0 Gm25887-201ENSMUST00000157777 84 ntBASIC1.69□□□□□ -2.14
Upf1Q9EPU0 Mir7241-201ENSMUST00000184532 64 ntBASIC1.69□□□□□ -2.14
Upf1Q9EPU0 Gm44948-201ENSMUST00000209050 149 ntBASIC1.69□□□□□ -2.14
Upf1Q9EPU0 Gm24271-201ENSMUST00000102327 111 ntBASIC1.68□□□□□ -2.14
Upf1Q9EPU0 Gm22213-201ENSMUST00000157564 119 ntBASIC1.68□□□□□ -2.14
Upf1Q9EPU0 Gm24547-201ENSMUST00000158649 149 ntBASIC1.68□□□□□ -2.14
Upf1Q9EPU0 Trbv25-201ENSMUST00000194700 273 ntBASIC1.68□□□□□ -2.14
Upf1Q9EPU0 Mir324-201ENSMUST00000083600 89 ntBASIC1.68□□□□□ -2.14
Upf1Q9EPU0 Gm44560-201ENSMUST00000207816 3115 ntBASIC1.67□□□□□ -2.14
Upf1Q9EPU0 Gm23126-201ENSMUST00000104260 134 ntBASIC1.67□□□□□ -2.14
Upf1Q9EPU0 Gm25680-201ENSMUST00000116917 126 ntBASIC1.67□□□□□ -2.14
Upf1Q9EPU0 Gm22635-201ENSMUST00000116962 126 ntBASIC1.67□□□□□ -2.14
Upf1Q9EPU0 Gm24808-201ENSMUST00000157993 118 ntBASIC1.67□□□□□ -2.14
Upf1Q9EPU0 Mir1961-201ENSMUST00000158643 112 ntBASIC1.67□□□□□ -2.14
Upf1Q9EPU0 Gm24877-201ENSMUST00000158779 116 ntBASIC1.67□□□□□ -2.14
Upf1Q9EPU0 Gm25247-201ENSMUST00000175475 90 ntBASIC1.67□□□□□ -2.14
Upf1Q9EPU0 Gm6985-201ENSMUST00000121255 271 ntBASIC1.66□□□□□ -2.14
Upf1Q9EPU0 Gm23114-201ENSMUST00000158478 117 ntBASIC1.66□□□□□ -2.14
Upf1Q9EPU0 Gm23384-201ENSMUST00000158593 103 ntBASIC1.66□□□□□ -2.14
Upf1Q9EPU0 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1.66□□□□□ -2.14
Upf1Q9EPU0 Scarna9-201ENSMUST00000104318 70 ntBASIC1.65□□□□□ -2.15
Upf1Q9EPU0 n-R5s70-201ENSMUST00000122650 116 ntBASIC1.65□□□□□ -2.15
Upf1Q9EPU0 Traj60-201ENSMUST00000167781 54 ntBASIC1.65□□□□□ -2.15
Upf1Q9EPU0 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
Upf1Q9EPU0 Gm24579-201ENSMUST00000103964 144 ntBASIC1.64□□□□□ -2.15
Upf1Q9EPU0 Gm23763-201ENSMUST00000158345 60 ntBASIC1.64□□□□□ -2.15
Upf1Q9EPU0 Gm22944-201ENSMUST00000158662 133 ntBASIC1.64□□□□□ -2.15
Upf1Q9EPU0 Gm24575-201ENSMUST00000175502 77 ntBASIC1.64□□□□□ -2.15
Upf1Q9EPU0 Gm16399-201ENSMUST00000181423 219 ntBASIC1.64□□□□□ -2.15
Upf1Q9EPU0 Gm27607-201ENSMUST00000185162 122 ntBASIC1.64□□□□□ -2.15
Upf1Q9EPU0 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC1.64□□□□□ -2.15
Upf1Q9EPU0 Gm24222-201ENSMUST00000158834 93 ntBASIC1.63□□□□□ -2.15
Upf1Q9EPU0 Gm23339-201ENSMUST00000158962 139 ntBASIC1.63□□□□□ -2.15
Upf1Q9EPU0 Mir7063-201ENSMUST00000184158 91 ntBASIC1.63□□□□□ -2.15
Upf1Q9EPU0 Snord60-201ENSMUST00000082834 78 ntBASIC1.63□□□□□ -2.15
Upf1Q9EPU0 Gm25497-201ENSMUST00000104425 132 ntBASIC1.62□□□□□ -2.15
Upf1Q9EPU0 Gm24555-201ENSMUST00000104548 124 ntBASIC1.62□□□□□ -2.15
Upf1Q9EPU0 Gm22801-201ENSMUST00000175624 84 ntBASIC1.62□□□□□ -2.15
Upf1Q9EPU0 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Upf1Q9EPU0 Mir1899-201ENSMUST00000122798 96 ntBASIC1.61□□□□□ -2.15
Upf1Q9EPU0 Gm26274-201ENSMUST00000157103 321 ntBASIC1.61□□□□□ -2.15
Upf1Q9EPU0 Gm22603-201ENSMUST00000157603 96 ntBASIC1.61□□□□□ -2.15
Upf1Q9EPU0 Gm22386-201ENSMUST00000158192 129 ntBASIC1.61□□□□□ -2.15
Upf1Q9EPU0 Mir219b-201ENSMUST00000198317 65 ntBASIC1.61□□□□□ -2.15
Upf1Q9EPU0 Gm26224-201ENSMUST00000082506 80 ntBASIC1.61□□□□□ -2.15
Upf1Q9EPU0 Gm25128-201ENSMUST00000083339 76 ntBASIC1.61□□□□□ -2.15
Upf1Q9EPU0 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC1.6□□□□□ -2.15
Upf1Q9EPU0 Gm22319-201ENSMUST00000157147 122 ntBASIC1.6□□□□□ -2.15
Upf1Q9EPU0 Gm24223-201ENSMUST00000158827 90 ntBASIC1.6□□□□□ -2.15
Upf1Q9EPU0 Gm26290-201ENSMUST00000158891 145 ntBASIC1.6□□□□□ -2.15
Upf1Q9EPU0 Gm44396-201ENSMUST00000199843 114 ntBASIC1.6□□□□□ -2.15
Upf1Q9EPU0 AC159093.2-201ENSMUST00000227881 297 ntBASIC1.6□□□□□ -2.15
Upf1Q9EPU0 Mir802-201ENSMUST00000103258 97 ntBASIC1.59□□□□□ -2.15
Upf1Q9EPU0 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC1.59□□□□□ -2.15
Upf1Q9EPU0 mt-Tv-201ENSMUST00000082389 69 ntBASIC1.59□□□□□ -2.15
Upf1Q9EPU0 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Upf1Q9EPU0 Gm22963-201ENSMUST00000157960 91 ntBASIC1.58□□□□□ -2.16
Upf1Q9EPU0 Gm23351-201ENSMUST00000158427 125 ntBASIC1.58□□□□□ -2.16
Upf1Q9EPU0 Gm43977-201ENSMUST00000203970 189 ntBASIC1.58□□□□□ -2.16
Upf1Q9EPU0 Gm24524-201ENSMUST00000082925 170 ntBASIC1.58□□□□□ -2.16
Upf1Q9EPU0 Gm25495-201ENSMUST00000104431 131 ntBASIC1.57□□□□□ -2.16
Upf1Q9EPU0 Gm23881-201ENSMUST00000116872 66 ntBASIC1.57□□□□□ -2.16
Upf1Q9EPU0 Mir1191-201ENSMUST00000116883 120 ntBASIC1.57□□□□□ -2.16
Upf1Q9EPU0 Gm23893-201ENSMUST00000158106 134 ntBASIC1.57□□□□□ -2.16
Upf1Q9EPU0 Gm24174-201ENSMUST00000158933 111 ntBASIC1.57□□□□□ -2.16
Upf1Q9EPU0 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC1.57□□□□□ -2.16
Upf1Q9EPU0 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.57□□□□□ -2.16
Upf1Q9EPU0 Gm25629-201ENSMUST00000084001 107 ntBASIC1.57□□□□□ -2.16
Upf1Q9EPU0 Gm23130-201ENSMUST00000104252 74 ntBASIC1.56□□□□□ -2.16
Upf1Q9EPU0 Gm24476-201ENSMUST00000157437 131 ntBASIC1.56□□□□□ -2.16
Upf1Q9EPU0 Snord80-201ENSMUST00000083801 81 ntBASIC1.56□□□□□ -2.16
Upf1Q9EPU0 Gm42533-201ENSMUST00000196247 157 ntBASIC1.55□□□□□ -2.16
Upf1Q9EPU0 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Upf1Q9EPU0 Gm25370-201ENSMUST00000158159 94 ntBASIC1.54□□□□□ -2.16
Upf1Q9EPU0 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC1.54□□□□□ -2.16
Upf1Q9EPU0 Gm24527-201ENSMUST00000082920 107 ntBASIC1.54□□□□□ -2.16
Upf1Q9EPU0 Gm23244-201ENSMUST00000083375 92 ntBASIC1.54□□□□□ -2.16
Upf1Q9EPU0 AC127302.3-201ENSMUST00000215480 2791 ntBASIC1.53□□□□□ -2.16
Upf1Q9EPU0 Gm25901-201ENSMUST00000158494 130 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 295 ms