Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm27792-201ENSMUST00000184031 115 ntBASIC-0.3□□□□□ -2.46
Ccdc3Q9D6Y1 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.3□□□□□ -2.46
Ccdc3Q9D6Y1 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.31□□□□□ -2.46
Ccdc3Q9D6Y1 Snora15-201ENSMUST00000177461 131 ntBASIC-0.31□□□□□ -2.46
Ccdc3Q9D6Y1 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.32□□□□□ -2.46
Ccdc3Q9D6Y1 Gm14947-201ENSMUST00000133704 303 ntBASIC-0.32□□□□□ -2.46
Ccdc3Q9D6Y1 Gm22101-201ENSMUST00000157928 103 ntBASIC-0.32□□□□□ -2.46
Ccdc3Q9D6Y1 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC-0.32□□□□□ -2.46
Ccdc3Q9D6Y1 Gm23442-201ENSMUST00000082919 134 ntBASIC-0.32□□□□□ -2.46
Ccdc3Q9D6Y1 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC-0.32□□□□□ -2.46
Ccdc3Q9D6Y1 Gm11694-201ENSMUST00000118637 159 ntBASIC-0.33□□□□□ -2.46
Ccdc3Q9D6Y1 Gm24009-201ENSMUST00000157734 93 ntBASIC-0.33□□□□□ -2.46
Ccdc3Q9D6Y1 Mir344-2-201ENSMUST00000175446 80 ntBASIC-0.33□□□□□ -2.46
Ccdc3Q9D6Y1 Gm23141-201ENSMUST00000178682 94 ntBASIC-0.33□□□□□ -2.46
Ccdc3Q9D6Y1 Gm44489-201ENSMUST00000104619 97 ntBASIC-0.34□□□□□ -2.46
Ccdc3Q9D6Y1 Gm23987-201ENSMUST00000117039 129 ntBASIC-0.34□□□□□ -2.46
Ccdc3Q9D6Y1 Gm25108-201ENSMUST00000122473 78 ntBASIC-0.34□□□□□ -2.46
Ccdc3Q9D6Y1 Gm27934-201ENSMUST00000158795 63 ntBASIC-0.34□□□□□ -2.46
Ccdc3Q9D6Y1 Gm25749-201ENSMUST00000175485 111 ntBASIC-0.34□□□□□ -2.46
Ccdc3Q9D6Y1 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.34□□□□□ -2.46
Ccdc3Q9D6Y1 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.34□□□□□ -2.46
Ccdc3Q9D6Y1 Gm43927-201ENSMUST00000204599 117 ntBASIC-0.34□□□□□ -2.46
Ccdc3Q9D6Y1 AC154245.1-201ENSMUST00000224615 601 ntBASIC-0.34□□□□□ -2.46
Ccdc3Q9D6Y1 Gm25797-201ENSMUST00000082640 107 ntBASIC-0.34□□□□□ -2.46
Ccdc3Q9D6Y1 Snord61-201ENSMUST00000083176 71 ntBASIC-0.34□□□□□ -2.46
Ccdc3Q9D6Y1 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.35□□□□□ -2.47
Ccdc3Q9D6Y1 Gm25160-201ENSMUST00000158914 102 ntBASIC-0.35□□□□□ -2.47
Ccdc3Q9D6Y1 Gm27905-201ENSMUST00000184005 207 ntBASIC-0.35□□□□□ -2.47
Ccdc3Q9D6Y1 mt-Ta-201ENSMUST00000082398 69 ntBASIC-0.35□□□□□ -2.47
Ccdc3Q9D6Y1 Gm22287-201ENSMUST00000083197 107 ntBASIC-0.35□□□□□ -2.47
Ccdc3Q9D6Y1 Mir488-201ENSMUST00000093595 109 ntBASIC-0.35□□□□□ -2.47
Ccdc3Q9D6Y1 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC-0.36□□□□□ -2.47
Ccdc3Q9D6Y1 Gm23654-201ENSMUST00000116758 126 ntBASIC-0.36□□□□□ -2.47
Ccdc3Q9D6Y1 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC-0.36□□□□□ -2.47
Ccdc3Q9D6Y1 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.36□□□□□ -2.47
Ccdc3Q9D6Y1 Gm22838-201ENSMUST00000158437 99 ntBASIC-0.36□□□□□ -2.47
Ccdc3Q9D6Y1 Gm22476-201ENSMUST00000158902 100 ntBASIC-0.36□□□□□ -2.47
Ccdc3Q9D6Y1 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.36□□□□□ -2.47
Ccdc3Q9D6Y1 Gm27297-201ENSMUST00000183395 105 ntBASIC-0.36□□□□□ -2.47
Ccdc3Q9D6Y1 Gm37750-201ENSMUST00000193563 129 ntBASIC-0.36□□□□□ -2.47
Ccdc3Q9D6Y1 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.36□□□□□ -2.47
Ccdc3Q9D6Y1 Mir302d-201ENSMUST00000083513 66 ntBASIC-0.36□□□□□ -2.47
Ccdc3Q9D6Y1 AC154506.4-201ENSMUST00000224898 3416 ntBASIC-0.37□□□□□ -2.47
Ccdc3Q9D6Y1 Gm24132-201ENSMUST00000104745 91 ntBASIC-0.37□□□□□ -2.47
Ccdc3Q9D6Y1 Gm14838-201ENSMUST00000118913 248 ntBASIC-0.37□□□□□ -2.47
Ccdc3Q9D6Y1 Gm22788-201ENSMUST00000157876 61 ntBASIC-0.37□□□□□ -2.47
Ccdc3Q9D6Y1 Gm23545-201ENSMUST00000158205 104 ntBASIC-0.37□□□□□ -2.47
Ccdc3Q9D6Y1 Gm24225-201ENSMUST00000158825 98 ntBASIC-0.37□□□□□ -2.47
Ccdc3Q9D6Y1 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.37□□□□□ -2.47
Ccdc3Q9D6Y1 Gm17020-201ENSMUST00000172274 274 ntBASIC-0.37□□□□□ -2.47
Ccdc3Q9D6Y1 Mir21b-201ENSMUST00000184317 108 ntBASIC-0.37□□□□□ -2.47
Ccdc3Q9D6Y1 AC124739.2-201ENSMUST00000222201 109 ntBASIC-0.37□□□□□ -2.47
Ccdc3Q9D6Y1 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.37□□□□□ -2.47
Ccdc3Q9D6Y1 Gm25899-201ENSMUST00000082672 141 ntBASIC-0.37□□□□□ -2.47
Ccdc3Q9D6Y1 Gm23303-201ENSMUST00000082714 152 ntBASIC-0.37□□□□□ -2.47
Ccdc3Q9D6Y1 Gm22509-201ENSMUST00000082775 107 ntBASIC-0.37□□□□□ -2.47
Ccdc3Q9D6Y1 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.37□□□□□ -2.47
Ccdc3Q9D6Y1 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.38□□□□□ -2.47
Ccdc3Q9D6Y1 Gm27579-201ENSMUST00000158113 63 ntBASIC-0.38□□□□□ -2.47
Ccdc3Q9D6Y1 Gm38295-201ENSMUST00000191951 151 ntBASIC-0.38□□□□□ -2.47
Ccdc3Q9D6Y1 Gm25756-201ENSMUST00000103990 136 ntBASIC-0.39□□□□□ -2.47
Ccdc3Q9D6Y1 Gm22148-201ENSMUST00000104445 107 ntBASIC-0.39□□□□□ -2.47
Ccdc3Q9D6Y1 n-R5s39-201ENSMUST00000122613 108 ntBASIC-0.39□□□□□ -2.47
Ccdc3Q9D6Y1 Gm25056-201ENSMUST00000157372 62 ntBASIC-0.39□□□□□ -2.47
Ccdc3Q9D6Y1 Gm25184-201ENSMUST00000157753 163 ntBASIC-0.39□□□□□ -2.47
Ccdc3Q9D6Y1 Gm24843-201ENSMUST00000158682 76 ntBASIC-0.39□□□□□ -2.47
Ccdc3Q9D6Y1 Gm25834-201ENSMUST00000158916 101 ntBASIC-0.39□□□□□ -2.47
Ccdc3Q9D6Y1 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC-0.39□□□□□ -2.47
Ccdc3Q9D6Y1 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.4□□□□□ -2.47
Ccdc3Q9D6Y1 Gm26398-201ENSMUST00000179015 127 ntBASIC-0.4□□□□□ -2.47
Ccdc3Q9D6Y1 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC-0.4□□□□□ -2.47
Ccdc3Q9D6Y1 AC153646.2-201ENSMUST00000220516 109 ntBASIC-0.4□□□□□ -2.47
Ccdc3Q9D6Y1 Gm23012-201ENSMUST00000104149 83 ntBASIC-0.41□□□□□ -2.48
Ccdc3Q9D6Y1 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.41□□□□□ -2.48
Ccdc3Q9D6Y1 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.41□□□□□ -2.48
Ccdc3Q9D6Y1 Gm43381-201ENSMUST00000198553 165 ntBASIC-0.41□□□□□ -2.48
Ccdc3Q9D6Y1 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.41□□□□□ -2.48
Ccdc3Q9D6Y1 Gm24524-201ENSMUST00000082925 170 ntBASIC-0.41□□□□□ -2.48
Ccdc3Q9D6Y1 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC-0.42□□□□□ -2.48
Ccdc3Q9D6Y1 Gm24374-201ENSMUST00000104394 106 ntBASIC-0.42□□□□□ -2.48
Ccdc3Q9D6Y1 Gm11936-201ENSMUST00000118323 160 ntBASIC-0.42□□□□□ -2.48
Ccdc3Q9D6Y1 Gm25985-201ENSMUST00000122677 107 ntBASIC-0.42□□□□□ -2.48
Ccdc3Q9D6Y1 Gm26403-201ENSMUST00000158500 105 ntBASIC-0.42□□□□□ -2.48
Ccdc3Q9D6Y1 Gm23445-201ENSMUST00000082800 107 ntBASIC-0.42□□□□□ -2.48
Ccdc3Q9D6Y1 Mir764-201ENSMUST00000103259 108 ntBASIC-0.43□□□□□ -2.48
Ccdc3Q9D6Y1 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.43□□□□□ -2.48
Ccdc3Q9D6Y1 Gm27735-201ENSMUST00000185085 76 ntBASIC-0.43□□□□□ -2.48
Ccdc3Q9D6Y1 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC-0.43□□□□□ -2.48
Ccdc3Q9D6Y1 Snord80-202ENSMUST00000199023 77 ntBASIC-0.43□□□□□ -2.48
Ccdc3Q9D6Y1 AC124687.1-201ENSMUST00000221868 189 ntBASIC-0.43□□□□□ -2.48
Ccdc3Q9D6Y1 Gm25629-201ENSMUST00000084001 107 ntBASIC-0.43□□□□□ -2.48
Ccdc3Q9D6Y1 Gm24468-201ENSMUST00000104489 104 ntBASIC-0.44□□□□□ -2.48
Ccdc3Q9D6Y1 Gm11644-201ENSMUST00000119735 150 ntBASIC-0.44□□□□□ -2.48
Ccdc3Q9D6Y1 Gm22100-201ENSMUST00000157926 63 ntBASIC-0.44□□□□□ -2.48
Ccdc3Q9D6Y1 Gm22966-201ENSMUST00000157957 129 ntBASIC-0.44□□□□□ -2.48
Ccdc3Q9D6Y1 Gm22675-201ENSMUST00000158430 104 ntBASIC-0.44□□□□□ -2.48
Ccdc3Q9D6Y1 Gm27803-201ENSMUST00000183763 119 ntBASIC-0.44□□□□□ -2.48
Ccdc3Q9D6Y1 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.44□□□□□ -2.48
Ccdc3Q9D6Y1 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC-0.44□□□□□ -2.48
Ccdc3Q9D6Y1 Gm24232-201ENSMUST00000104314 132 ntBASIC-0.45□□□□□ -2.48
Retrieved 100 of 76,532 protein–RNA pairs in 165.6 ms