Protein–RNA interactions for Protein: Q9D5Y1

Ccdc39, Coiled-coil domain-containing protein 39, mousemouse

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39Q9D5Y1 Snord33-201ENSMUST00000083694 84 ntBASIC0.68□□□□□ -2.3
Ccdc39Q9D5Y1 Gm24258-201ENSMUST00000083739 133 ntBASIC0.68□□□□□ -2.3
Ccdc39Q9D5Y1 Mir20b-201ENSMUST00000102087 80 ntBASIC0.67□□□□□ -2.3
Ccdc39Q9D5Y1 Gm23881-201ENSMUST00000116872 66 ntBASIC0.67□□□□□ -2.3
Ccdc39Q9D5Y1 Mir1191-201ENSMUST00000116883 120 ntBASIC0.67□□□□□ -2.3
Ccdc39Q9D5Y1 Gm23434-201ENSMUST00000157179 100 ntBASIC0.67□□□□□ -2.3
Ccdc39Q9D5Y1 Gm26290-201ENSMUST00000158891 145 ntBASIC0.67□□□□□ -2.3
Ccdc39Q9D5Y1 Gm44488-201ENSMUST00000199467 119 ntBASIC0.67□□□□□ -2.3
Ccdc39Q9D5Y1 mt-Tt-201ENSMUST00000082422 67 ntBASIC0.67□□□□□ -2.3
Ccdc39Q9D5Y1 Gm25496-201ENSMUST00000104430 120 ntBASIC0.66□□□□□ -2.3
Ccdc39Q9D5Y1 Gm24605-201ENSMUST00000104772 96 ntBASIC0.66□□□□□ -2.3
Ccdc39Q9D5Y1 Gm22196-201ENSMUST00000116865 109 ntBASIC0.66□□□□□ -2.3
Ccdc39Q9D5Y1 Gm12086-201ENSMUST00000120863 228 ntBASIC0.66□□□□□ -2.3
Ccdc39Q9D5Y1 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.66□□□□□ -2.3
Ccdc39Q9D5Y1 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.66□□□□□ -2.3
Ccdc39Q9D5Y1 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.66□□□□□ -2.3
Ccdc39Q9D5Y1 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.66□□□□□ -2.3
Ccdc39Q9D5Y1 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.66□□□□□ -2.3
Ccdc39Q9D5Y1 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.66□□□□□ -2.3
Ccdc39Q9D5Y1 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.66□□□□□ -2.3
Ccdc39Q9D5Y1 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.66□□□□□ -2.3
Ccdc39Q9D5Y1 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.66□□□□□ -2.3
Ccdc39Q9D5Y1 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.66□□□□□ -2.3
Ccdc39Q9D5Y1 Mir219b-201ENSMUST00000198317 65 ntBASIC0.66□□□□□ -2.3
Ccdc39Q9D5Y1 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.66□□□□□ -2.3
Ccdc39Q9D5Y1 Snord60-201ENSMUST00000082834 78 ntBASIC0.66□□□□□ -2.3
Ccdc39Q9D5Y1 Snord69-201ENSMUST00000104024 80 ntBASIC0.65□□□□□ -2.31
Ccdc39Q9D5Y1 Gm22381-201ENSMUST00000158186 107 ntBASIC0.65□□□□□ -2.31
Ccdc39Q9D5Y1 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.65□□□□□ -2.31
Ccdc39Q9D5Y1 Mir21c-201ENSMUST00000184910 78 ntBASIC0.65□□□□□ -2.31
Ccdc39Q9D5Y1 Gm36956-201ENSMUST00000193830 214 ntBASIC0.65□□□□□ -2.31
Ccdc39Q9D5Y1 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.65□□□□□ -2.31
Ccdc39Q9D5Y1 Gm25006-201ENSMUST00000083813 107 ntBASIC0.65□□□□□ -2.31
Ccdc39Q9D5Y1 Gm25416-201ENSMUST00000104221 107 ntBASIC0.64□□□□□ -2.31
Ccdc39Q9D5Y1 Gm12013-201ENSMUST00000121971 155 ntBASIC0.64□□□□□ -2.31
Ccdc39Q9D5Y1 Gm26274-201ENSMUST00000157103 321 ntBASIC0.64□□□□□ -2.31
Ccdc39Q9D5Y1 Gm24678-201ENSMUST00000158756 104 ntBASIC0.64□□□□□ -2.31
Ccdc39Q9D5Y1 Gm24223-201ENSMUST00000158827 90 ntBASIC0.64□□□□□ -2.31
Ccdc39Q9D5Y1 Gm22638-201ENSMUST00000179674 107 ntBASIC0.64□□□□□ -2.31
Ccdc39Q9D5Y1 Gm28435-201ENSMUST00000185496 108 ntBASIC0.64□□□□□ -2.31
Ccdc39Q9D5Y1 Gm43324-201ENSMUST00000197482 289 ntBASIC0.64□□□□□ -2.31
Ccdc39Q9D5Y1 Gm23507-201ENSMUST00000083078 107 ntBASIC0.64□□□□□ -2.31
Ccdc39Q9D5Y1 Gm22031-201ENSMUST00000116945 126 ntBASIC0.63□□□□□ -2.31
Ccdc39Q9D5Y1 Gm24649-201ENSMUST00000157106 134 ntBASIC0.63□□□□□ -2.31
Ccdc39Q9D5Y1 Gm23857-201ENSMUST00000158379 111 ntBASIC0.63□□□□□ -2.31
Ccdc39Q9D5Y1 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.63□□□□□ -2.31
Ccdc39Q9D5Y1 Gm26498-201ENSMUST00000177799 79 ntBASIC0.63□□□□□ -2.31
Ccdc39Q9D5Y1 Gm26230-201ENSMUST00000180141 79 ntBASIC0.63□□□□□ -2.31
Ccdc39Q9D5Y1 Gm37330-201ENSMUST00000192606 153 ntBASIC0.63□□□□□ -2.31
Ccdc39Q9D5Y1 Gm23060-201ENSMUST00000102345 109 ntBASIC0.62□□□□□ -2.31
Ccdc39Q9D5Y1 Mir764-201ENSMUST00000103259 108 ntBASIC0.62□□□□□ -2.31
Ccdc39Q9D5Y1 Gm25378-201ENSMUST00000104333 129 ntBASIC0.62□□□□□ -2.31
Ccdc39Q9D5Y1 Gm23351-201ENSMUST00000158427 125 ntBASIC0.62□□□□□ -2.31
Ccdc39Q9D5Y1 Gm10548-202ENSMUST00000165672 272 ntBASIC0.62□□□□□ -2.31
Ccdc39Q9D5Y1 AC124687.1-201ENSMUST00000221868 189 ntBASIC0.62□□□□□ -2.31
Ccdc39Q9D5Y1 Gm25899-201ENSMUST00000082672 141 ntBASIC0.62□□□□□ -2.31
Ccdc39Q9D5Y1 Gm25138-201ENSMUST00000083248 136 ntBASIC0.62□□□□□ -2.31
Ccdc39Q9D5Y1 Gm12469-201ENSMUST00000117623 207 ntBASIC0.61□□□□□ -2.31
Ccdc39Q9D5Y1 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.61□□□□□ -2.31
Ccdc39Q9D5Y1 Gm6272-201ENSMUST00000121256 171 ntBASIC0.61□□□□□ -2.31
Ccdc39Q9D5Y1 Gm24549-201ENSMUST00000158647 139 ntBASIC0.61□□□□□ -2.31
Ccdc39Q9D5Y1 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.61□□□□□ -2.31
Ccdc39Q9D5Y1 Gm23917-201ENSMUST00000175256 98 ntBASIC0.61□□□□□ -2.31
Ccdc39Q9D5Y1 Gm22466-201ENSMUST00000175278 69 ntBASIC0.61□□□□□ -2.31
Ccdc39Q9D5Y1 Gm26285-201ENSMUST00000177923 107 ntBASIC0.61□□□□□ -2.31
Ccdc39Q9D5Y1 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.61□□□□□ -2.31
Ccdc39Q9D5Y1 Gm23622-201ENSMUST00000082460 107 ntBASIC0.61□□□□□ -2.31
Ccdc39Q9D5Y1 Gm22302-201ENSMUST00000082657 106 ntBASIC0.61□□□□□ -2.31
Ccdc39Q9D5Y1 Mir30a-201ENSMUST00000083471 71 ntBASIC0.61□□□□□ -2.31
Ccdc39Q9D5Y1 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
Ccdc39Q9D5Y1 Mir802-201ENSMUST00000103258 97 ntBASIC0.6□□□□□ -2.31
Ccdc39Q9D5Y1 Snord78-201ENSMUST00000104032 66 ntBASIC0.6□□□□□ -2.31
Ccdc39Q9D5Y1 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.6□□□□□ -2.31
Ccdc39Q9D5Y1 Gm26158-201ENSMUST00000158973 119 ntBASIC0.6□□□□□ -2.31
Ccdc39Q9D5Y1 Gm28270-201ENSMUST00000188550 109 ntBASIC0.6□□□□□ -2.31
Ccdc39Q9D5Y1 Gm28328-201ENSMUST00000188869 109 ntBASIC0.6□□□□□ -2.31
Ccdc39Q9D5Y1 Gm44211-201ENSMUST00000204867 145 ntBASIC0.6□□□□□ -2.31
Ccdc39Q9D5Y1 Gm43944-201ENSMUST00000205220 120 ntBASIC0.6□□□□□ -2.31
Ccdc39Q9D5Y1 Gm44602-201ENSMUST00000205948 132 ntBASIC0.6□□□□□ -2.31
Ccdc39Q9D5Y1 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.6□□□□□ -2.31
Ccdc39Q9D5Y1 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
Ccdc39Q9D5Y1 Gm24705-201ENSMUST00000082808 107 ntBASIC0.59□□□□□ -2.31
Ccdc39Q9D5Y1 Mir1a-1-201ENSMUST00000093635 77 ntBASIC0.59□□□□□ -2.31
Ccdc39Q9D5Y1 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.59□□□□□ -2.32
Ccdc39Q9D5Y1 Gm23853-201ENSMUST00000158375 104 ntBASIC0.58□□□□□ -2.32
Ccdc39Q9D5Y1 Gm26398-201ENSMUST00000179015 127 ntBASIC0.58□□□□□ -2.32
Ccdc39Q9D5Y1 Gm44469-201ENSMUST00000198558 79 ntBASIC0.58□□□□□ -2.32
Ccdc39Q9D5Y1 Gm45429-201ENSMUST00000209527 172 ntBASIC0.58□□□□□ -2.32
Ccdc39Q9D5Y1 Gm23138-201ENSMUST00000083365 103 ntBASIC0.58□□□□□ -2.32
Ccdc39Q9D5Y1 Gm23065-201ENSMUST00000158236 130 ntBASIC0.57□□□□□ -2.32
Ccdc39Q9D5Y1 Gm22522-201ENSMUST00000158271 151 ntBASIC0.57□□□□□ -2.32
Ccdc39Q9D5Y1 Gm22089-201ENSMUST00000158336 102 ntBASIC0.57□□□□□ -2.32
Ccdc39Q9D5Y1 Gm23384-201ENSMUST00000158593 103 ntBASIC0.57□□□□□ -2.32
Ccdc39Q9D5Y1 Gm23416-201ENSMUST00000175520 95 ntBASIC0.57□□□□□ -2.32
Ccdc39Q9D5Y1 Gm27993-201ENSMUST00000184362 85 ntBASIC0.57□□□□□ -2.32
Ccdc39Q9D5Y1 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.57□□□□□ -2.32
Ccdc39Q9D5Y1 Gm24524-201ENSMUST00000082925 170 ntBASIC0.57□□□□□ -2.32
Ccdc39Q9D5Y1 Gm11694-201ENSMUST00000118637 159 ntBASIC0.56□□□□□ -2.32
Ccdc39Q9D5Y1 Gm24894-201ENSMUST00000122744 118 ntBASIC0.56□□□□□ -2.32
Ccdc39Q9D5Y1 Gm23986-201ENSMUST00000157144 63 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 219.1 ms