Protein–RNA interactions for Protein: Q9CWY9

Rpain, RPA-interacting protein, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpainQ9CWY9 Mir8116-201ENSMUST00000184134 97 ntBASIC1.77□□□□□ -2.13
RpainQ9CWY9 Gm20118-201ENSMUST00000187207 162 ntBASIC1.77□□□□□ -2.13
RpainQ9CWY9 Gm22458-201ENSMUST00000082576 107 ntBASIC1.77□□□□□ -2.13
RpainQ9CWY9 Gm26062-201ENSMUST00000083379 107 ntBASIC1.77□□□□□ -2.13
RpainQ9CWY9 Scarna9-201ENSMUST00000104318 70 ntBASIC1.76□□□□□ -2.13
RpainQ9CWY9 Gm23528-201ENSMUST00000104571 132 ntBASIC1.76□□□□□ -2.13
RpainQ9CWY9 Gm23763-201ENSMUST00000158345 60 ntBASIC1.76□□□□□ -2.13
RpainQ9CWY9 Mir5104-201ENSMUST00000175319 94 ntBASIC1.76□□□□□ -2.13
RpainQ9CWY9 Gm27686-201ENSMUST00000185123 91 ntBASIC1.76□□□□□ -2.13
RpainQ9CWY9 Gm44384-201ENSMUST00000200208 114 ntBASIC1.76□□□□□ -2.13
RpainQ9CWY9 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
RpainQ9CWY9 Gm14884-201ENSMUST00000120456 196 ntBASIC1.75□□□□□ -2.13
RpainQ9CWY9 Gm22556-201ENSMUST00000157803 100 ntBASIC1.75□□□□□ -2.13
RpainQ9CWY9 Gm24223-201ENSMUST00000158827 90 ntBASIC1.75□□□□□ -2.13
RpainQ9CWY9 Gm24399-201ENSMUST00000157869 74 ntBASIC1.74□□□□□ -2.13
RpainQ9CWY9 Gm26358-201ENSMUST00000158215 97 ntBASIC1.74□□□□□ -2.13
RpainQ9CWY9 Gm24638-201ENSMUST00000179807 132 ntBASIC1.74□□□□□ -2.13
RpainQ9CWY9 Gm25644-201ENSMUST00000083209 107 ntBASIC1.74□□□□□ -2.13
RpainQ9CWY9 Gm25992-201ENSMUST00000102437 109 ntBASIC1.73□□□□□ -2.13
RpainQ9CWY9 Gm23237-201ENSMUST00000104639 92 ntBASIC1.73□□□□□ -2.13
RpainQ9CWY9 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC1.73□□□□□ -2.13
RpainQ9CWY9 Gm22205-201ENSMUST00000122655 71 ntBASIC1.73□□□□□ -2.13
RpainQ9CWY9 Gm24076-201ENSMUST00000158179 94 ntBASIC1.73□□□□□ -2.13
RpainQ9CWY9 Gm25014-201ENSMUST00000158401 103 ntBASIC1.73□□□□□ -2.13
RpainQ9CWY9 Gm22403-201ENSMUST00000174919 84 ntBASIC1.73□□□□□ -2.13
RpainQ9CWY9 Snora26-201ENSMUST00000175614 121 ntBASIC1.73□□□□□ -2.13
RpainQ9CWY9 Mir3087-201ENSMUST00000199405 56 ntBASIC1.73□□□□□ -2.13
RpainQ9CWY9 Gm22761-201ENSMUST00000102278 96 ntBASIC1.72□□□□□ -2.13
RpainQ9CWY9 Mir301b-201ENSMUST00000102333 97 ntBASIC1.72□□□□□ -2.13
RpainQ9CWY9 Mir1191-201ENSMUST00000116883 120 ntBASIC1.72□□□□□ -2.13
RpainQ9CWY9 Gm25279-201ENSMUST00000122608 133 ntBASIC1.72□□□□□ -2.13
RpainQ9CWY9 Gm24384-201ENSMUST00000122693 75 ntBASIC1.72□□□□□ -2.13
RpainQ9CWY9 Gm23172-201ENSMUST00000157160 124 ntBASIC1.72□□□□□ -2.13
RpainQ9CWY9 Gm25740-201ENSMUST00000180247 107 ntBASIC1.72□□□□□ -2.13
RpainQ9CWY9 Gm27987-201ENSMUST00000184023 93 ntBASIC1.72□□□□□ -2.13
RpainQ9CWY9 AC122769.2-201ENSMUST00000227248 302 ntBASIC1.72□□□□□ -2.13
RpainQ9CWY9 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
RpainQ9CWY9 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.72□□□□□ -2.13
RpainQ9CWY9 Gm22522-201ENSMUST00000158271 151 ntBASIC1.71□□□□□ -2.14
RpainQ9CWY9 Gm22944-201ENSMUST00000158662 133 ntBASIC1.71□□□□□ -2.14
RpainQ9CWY9 Gm45197-201ENSMUST00000205288 151 ntBASIC1.71□□□□□ -2.14
RpainQ9CWY9 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
RpainQ9CWY9 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1.7□□□□□ -2.14
RpainQ9CWY9 Gm22802-201ENSMUST00000175621 89 ntBASIC1.7□□□□□ -2.14
RpainQ9CWY9 Gm44962-201ENSMUST00000206460 279 ntBASIC1.7□□□□□ -2.14
RpainQ9CWY9 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
RpainQ9CWY9 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.7□□□□□ -2.14
RpainQ9CWY9 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
RpainQ9CWY9 Gm25542-201ENSMUST00000116889 94 ntBASIC1.69□□□□□ -2.14
RpainQ9CWY9 Gm22732-201ENSMUST00000158093 121 ntBASIC1.69□□□□□ -2.14
RpainQ9CWY9 Mir3061-201ENSMUST00000175129 91 ntBASIC1.69□□□□□ -2.14
RpainQ9CWY9 Gm24162-201ENSMUST00000093665 102 ntBASIC1.69□□□□□ -2.14
RpainQ9CWY9 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.68□□□□□ -2.14
RpainQ9CWY9 Gm26478-201ENSMUST00000122611 133 ntBASIC1.68□□□□□ -2.14
RpainQ9CWY9 Gm24262-201ENSMUST00000157431 144 ntBASIC1.68□□□□□ -2.14
RpainQ9CWY9 Gm23900-201ENSMUST00000157569 108 ntBASIC1.68□□□□□ -2.14
RpainQ9CWY9 Gm22082-201ENSMUST00000157587 161 ntBASIC1.68□□□□□ -2.14
RpainQ9CWY9 Gm25730-201ENSMUST00000178753 165 ntBASIC1.68□□□□□ -2.14
RpainQ9CWY9 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC1.68□□□□□ -2.14
RpainQ9CWY9 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.68□□□□□ -2.14
RpainQ9CWY9 Gm25832-201ENSMUST00000104140 130 ntBASIC1.67□□□□□ -2.14
RpainQ9CWY9 Gm23482-201ENSMUST00000104172 122 ntBASIC1.67□□□□□ -2.14
RpainQ9CWY9 Gm11694-201ENSMUST00000118637 159 ntBASIC1.67□□□□□ -2.14
RpainQ9CWY9 Mir1899-201ENSMUST00000122798 96 ntBASIC1.67□□□□□ -2.14
RpainQ9CWY9 Gm22914-201ENSMUST00000175195 77 ntBASIC1.67□□□□□ -2.14
RpainQ9CWY9 Gm28767-201ENSMUST00000188601 114 ntBASIC1.67□□□□□ -2.14
RpainQ9CWY9 Gm44602-201ENSMUST00000205948 132 ntBASIC1.67□□□□□ -2.14
RpainQ9CWY9 AC122335.1-201ENSMUST00000217587 175 ntBASIC1.67□□□□□ -2.14
RpainQ9CWY9 Gm25854-201ENSMUST00000082792 72 ntBASIC1.67□□□□□ -2.14
RpainQ9CWY9 Mir5117-201ENSMUST00000083226 84 ntBASIC1.67□□□□□ -2.14
RpainQ9CWY9 Mir148b-201ENSMUST00000083626 97 ntBASIC1.67□□□□□ -2.14
RpainQ9CWY9 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
RpainQ9CWY9 Gm25322-201ENSMUST00000122556 104 ntBASIC1.66□□□□□ -2.14
RpainQ9CWY9 Gm24064-201ENSMUST00000157486 106 ntBASIC1.66□□□□□ -2.14
RpainQ9CWY9 Gm22887-201ENSMUST00000178586 107 ntBASIC1.66□□□□□ -2.14
RpainQ9CWY9 Gm27517-201ENSMUST00000184347 236 ntBASIC1.66□□□□□ -2.14
RpainQ9CWY9 Gm26133-201ENSMUST00000157363 100 ntBASIC1.65□□□□□ -2.15
RpainQ9CWY9 Gm24174-201ENSMUST00000158933 111 ntBASIC1.65□□□□□ -2.15
RpainQ9CWY9 Gm18433-201ENSMUST00000192747 197 ntBASIC1.65□□□□□ -2.15
RpainQ9CWY9 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.65□□□□□ -2.15
RpainQ9CWY9 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
RpainQ9CWY9 Gm24686-201ENSMUST00000157755 93 ntBASIC1.64□□□□□ -2.15
RpainQ9CWY9 Gm25035-201ENSMUST00000175414 77 ntBASIC1.64□□□□□ -2.15
RpainQ9CWY9 Gm25417-201ENSMUST00000104212 131 ntBASIC1.63□□□□□ -2.15
RpainQ9CWY9 Gm11333-201ENSMUST00000119479 148 ntBASIC1.63□□□□□ -2.15
RpainQ9CWY9 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC1.63□□□□□ -2.15
RpainQ9CWY9 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
RpainQ9CWY9 Mir223-201ENSMUST00000102112 110 ntBASIC1.62□□□□□ -2.15
RpainQ9CWY9 Gm22544-201ENSMUST00000104349 127 ntBASIC1.62□□□□□ -2.15
RpainQ9CWY9 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
RpainQ9CWY9 Gm25423-201ENSMUST00000157609 107 ntBASIC1.62□□□□□ -2.15
RpainQ9CWY9 Gm22539-201ENSMUST00000158167 117 ntBASIC1.62□□□□□ -2.15
RpainQ9CWY9 Gm23100-201ENSMUST00000083455 141 ntBASIC1.62□□□□□ -2.15
RpainQ9CWY9 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.62□□□□□ -2.15
RpainQ9CWY9 Mir544-201ENSMUST00000103813 78 ntBASIC1.61□□□□□ -2.15
RpainQ9CWY9 Gm23881-201ENSMUST00000116872 66 ntBASIC1.61□□□□□ -2.15
RpainQ9CWY9 Gm26181-201ENSMUST00000157687 106 ntBASIC1.61□□□□□ -2.15
RpainQ9CWY9 Gm24199-201ENSMUST00000157808 136 ntBASIC1.61□□□□□ -2.15
RpainQ9CWY9 Gm23221-201ENSMUST00000158118 93 ntBASIC1.61□□□□□ -2.15
RpainQ9CWY9 Gm24728-201ENSMUST00000158226 125 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 140.2 ms