Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm23605-201ENSMUST00000157255 127 ntBASIC0.45□□□□□ -2.34
Ddx28Q9CWT6 Gm24290-201ENSMUST00000157634 96 ntBASIC0.45□□□□□ -2.34
Ddx28Q9CWT6 Gm26412-201ENSMUST00000157666 55 ntBASIC0.45□□□□□ -2.34
Ddx28Q9CWT6 Gm25600-201ENSMUST00000158357 106 ntBASIC0.45□□□□□ -2.34
Ddx28Q9CWT6 Mir6342-201ENSMUST00000183870 125 ntBASIC0.45□□□□□ -2.34
Ddx28Q9CWT6 Gm3702-201ENSMUST00000211754 346 ntBASIC0.45□□□□□ -2.34
Ddx28Q9CWT6 Mir200b-201ENSMUST00000083615 70 ntBASIC0.45□□□□□ -2.34
Ddx28Q9CWT6 Gm24258-201ENSMUST00000083739 133 ntBASIC0.45□□□□□ -2.34
Ddx28Q9CWT6 Gm22966-201ENSMUST00000157957 129 ntBASIC0.44□□□□□ -2.34
Ddx28Q9CWT6 Gm43432-201ENSMUST00000196352 121 ntBASIC0.44□□□□□ -2.34
Ddx28Q9CWT6 Mir1949-202ENSMUST00000199259 70 ntBASIC0.44□□□□□ -2.34
Ddx28Q9CWT6 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.44□□□□□ -2.34
Ddx28Q9CWT6 Gm26202-201ENSMUST00000082910 65 ntBASIC0.44□□□□□ -2.34
Ddx28Q9CWT6 Gm22681-201ENSMUST00000083853 106 ntBASIC0.44□□□□□ -2.34
Ddx28Q9CWT6 Gm25091-201ENSMUST00000103997 71 ntBASIC0.43□□□□□ -2.34
Ddx28Q9CWT6 Gm22349-201ENSMUST00000157864 107 ntBASIC0.43□□□□□ -2.34
Ddx28Q9CWT6 Gm26285-201ENSMUST00000177923 107 ntBASIC0.43□□□□□ -2.34
Ddx28Q9CWT6 Gm23622-201ENSMUST00000082460 107 ntBASIC0.43□□□□□ -2.34
Ddx28Q9CWT6 Gm25629-201ENSMUST00000084001 107 ntBASIC0.43□□□□□ -2.34
Ddx28Q9CWT6 Gm22775-201ENSMUST00000177630 120 ntBASIC0.42□□□□□ -2.34
Ddx28Q9CWT6 Gm23569-201ENSMUST00000180120 120 ntBASIC0.42□□□□□ -2.34
Ddx28Q9CWT6 Mir21c-201ENSMUST00000184910 78 ntBASIC0.42□□□□□ -2.34
Ddx28Q9CWT6 Gm29535-201ENSMUST00000185723 109 ntBASIC0.42□□□□□ -2.34
Ddx28Q9CWT6 Gm28143-201ENSMUST00000191082 109 ntBASIC0.42□□□□□ -2.34
Ddx28Q9CWT6 Gm44470-201ENSMUST00000203913 142 ntBASIC0.42□□□□□ -2.34
Ddx28Q9CWT6 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
Ddx28Q9CWT6 Mir466b-3-201ENSMUST00000103806 81 ntBASIC0.41□□□□□ -2.34
Ddx28Q9CWT6 n-R5s39-201ENSMUST00000122613 108 ntBASIC0.41□□□□□ -2.34
Ddx28Q9CWT6 Gm12013-201ENSMUST00000121971 155 ntBASIC0.4□□□□□ -2.35
Ddx28Q9CWT6 Gm25393-201ENSMUST00000157336 285 ntBASIC0.4□□□□□ -2.35
Ddx28Q9CWT6 Gm17528-201ENSMUST00000171026 239 ntBASIC0.4□□□□□ -2.35
Ddx28Q9CWT6 Gm27943-201ENSMUST00000184844 116 ntBASIC0.4□□□□□ -2.35
Ddx28Q9CWT6 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC0.4□□□□□ -2.35
Ddx28Q9CWT6 Gm25496-201ENSMUST00000104430 120 ntBASIC0.39□□□□□ -2.35
Ddx28Q9CWT6 Gm24913-201ENSMUST00000157286 107 ntBASIC0.39□□□□□ -2.35
Ddx28Q9CWT6 Gm25974-201ENSMUST00000158701 94 ntBASIC0.39□□□□□ -2.35
Ddx28Q9CWT6 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
Ddx28Q9CWT6 Gm25071-201ENSMUST00000175232 70 ntBASIC0.39□□□□□ -2.35
Ddx28Q9CWT6 Mir376b-201ENSMUST00000195930 82 ntBASIC0.39□□□□□ -2.35
Ddx28Q9CWT6 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC0.39□□□□□ -2.35
Ddx28Q9CWT6 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC0.39□□□□□ -2.35
Ddx28Q9CWT6 Gm23239-201ENSMUST00000083006 181 ntBASIC0.39□□□□□ -2.35
Ddx28Q9CWT6 Gm25894-201ENSMUST00000083458 75 ntBASIC0.39□□□□□ -2.35
Ddx28Q9CWT6 Gm25040-201ENSMUST00000103877 66 ntBASIC0.38□□□□□ -2.35
Ddx28Q9CWT6 Gm23651-201ENSMUST00000116755 120 ntBASIC0.38□□□□□ -2.35
Ddx28Q9CWT6 Gm26303-201ENSMUST00000116845 119 ntBASIC0.38□□□□□ -2.35
Ddx28Q9CWT6 Gm13065-201ENSMUST00000119178 141 ntBASIC0.38□□□□□ -2.35
Ddx28Q9CWT6 Gm16186-201ENSMUST00000120132 216 ntBASIC0.38□□□□□ -2.35
Ddx28Q9CWT6 Gm24001-201ENSMUST00000158463 85 ntBASIC0.38□□□□□ -2.35
Ddx28Q9CWT6 Gm26337-201ENSMUST00000178000 79 ntBASIC0.38□□□□□ -2.35
Ddx28Q9CWT6 Gm45541-201ENSMUST00000210443 54 ntBASIC0.38□□□□□ -2.35
Ddx28Q9CWT6 mt-Ts2-201ENSMUST00000082416 59 ntBASIC0.38□□□□□ -2.35
Ddx28Q9CWT6 Gm26291-201ENSMUST00000158889 137 ntBASIC0.37□□□□□ -2.35
Ddx28Q9CWT6 Gm2077-201ENSMUST00000195017 319 ntBASIC0.37□□□□□ -2.35
Ddx28Q9CWT6 Mir7229-201ENSMUST00000197062 53 ntBASIC0.37□□□□□ -2.35
Ddx28Q9CWT6 Gm44455-201ENSMUST00000200061 82 ntBASIC0.37□□□□□ -2.35
Ddx28Q9CWT6 Gm44602-201ENSMUST00000205948 132 ntBASIC0.37□□□□□ -2.35
Ddx28Q9CWT6 Gm26168-201ENSMUST00000083787 112 ntBASIC0.37□□□□□ -2.35
Ddx28Q9CWT6 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.36□□□□□ -2.35
Ddx28Q9CWT6 Gm25416-201ENSMUST00000104221 107 ntBASIC0.36□□□□□ -2.35
Ddx28Q9CWT6 Gm23672-201ENSMUST00000157471 107 ntBASIC0.36□□□□□ -2.35
Ddx28Q9CWT6 Gm24321-201ENSMUST00000175348 80 ntBASIC0.36□□□□□ -2.35
Ddx28Q9CWT6 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC0.36□□□□□ -2.35
Ddx28Q9CWT6 Gm24233-201ENSMUST00000104317 122 ntBASIC0.35□□□□□ -2.35
Ddx28Q9CWT6 Gm11694-201ENSMUST00000118637 159 ntBASIC0.35□□□□□ -2.35
Ddx28Q9CWT6 Gm22983-201ENSMUST00000158308 104 ntBASIC0.35□□□□□ -2.35
Ddx28Q9CWT6 Gm22239-201ENSMUST00000175220 103 ntBASIC0.35□□□□□ -2.35
Ddx28Q9CWT6 Gm27297-201ENSMUST00000183395 105 ntBASIC0.35□□□□□ -2.35
Ddx28Q9CWT6 AC126939.1-201ENSMUST00000224943 226 ntBASIC0.35□□□□□ -2.35
Ddx28Q9CWT6 Gm24449-201ENSMUST00000083985 106 ntBASIC0.35□□□□□ -2.35
Ddx28Q9CWT6 Mir670-201ENSMUST00000102380 100 ntBASIC0.34□□□□□ -2.36
Ddx28Q9CWT6 Gm24278-201ENSMUST00000104239 127 ntBASIC0.34□□□□□ -2.36
Ddx28Q9CWT6 Gm23126-201ENSMUST00000104260 134 ntBASIC0.34□□□□□ -2.36
Ddx28Q9CWT6 Gm23922-201ENSMUST00000178792 79 ntBASIC0.34□□□□□ -2.36
Ddx28Q9CWT6 Gm8034-201ENSMUST00000178853 132 ntBASIC0.34□□□□□ -2.36
Ddx28Q9CWT6 Gm24657-201ENSMUST00000180085 79 ntBASIC0.34□□□□□ -2.36
Ddx28Q9CWT6 Gm22996-201ENSMUST00000180236 79 ntBASIC0.34□□□□□ -2.36
Ddx28Q9CWT6 Gm44457-201ENSMUST00000198109 76 ntBASIC0.34□□□□□ -2.36
Ddx28Q9CWT6 Gm44859-201ENSMUST00000207831 94 ntBASIC0.34□□□□□ -2.36
Ddx28Q9CWT6 Snora75-201ENSMUST00000082903 133 ntBASIC0.34□□□□□ -2.36
Ddx28Q9CWT6 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.34□□□□□ -2.36
Ddx28Q9CWT6 Gm10351-201ENSMUST00000087694 125 ntBASIC0.34□□□□□ -2.36
Ddx28Q9CWT6 Gm22759-201ENSMUST00000102276 96 ntBASIC0.33□□□□□ -2.36
Ddx28Q9CWT6 Gm23060-201ENSMUST00000102345 109 ntBASIC0.33□□□□□ -2.36
Ddx28Q9CWT6 Gm23661-201ENSMUST00000122630 87 ntBASIC0.33□□□□□ -2.36
Ddx28Q9CWT6 Gm22706-201ENSMUST00000157907 112 ntBASIC0.33□□□□□ -2.36
Ddx28Q9CWT6 Gm22089-201ENSMUST00000158336 102 ntBASIC0.33□□□□□ -2.36
Ddx28Q9CWT6 Gm22708-201ENSMUST00000158987 103 ntBASIC0.33□□□□□ -2.36
Ddx28Q9CWT6 AC124687.1-201ENSMUST00000221868 189 ntBASIC0.33□□□□□ -2.36
Ddx28Q9CWT6 Gm22652-201ENSMUST00000083207 131 ntBASIC0.33□□□□□ -2.36
Ddx28Q9CWT6 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.32□□□□□ -2.36
Ddx28Q9CWT6 Mir297a-2-201ENSMUST00000103795 90 ntBASIC0.32□□□□□ -2.36
Ddx28Q9CWT6 Gm25623-201ENSMUST00000157216 108 ntBASIC0.32□□□□□ -2.36
Ddx28Q9CWT6 Gm27717-201ENSMUST00000183933 151 ntBASIC0.32□□□□□ -2.36
Ddx28Q9CWT6 Mir216b-201ENSMUST00000102363 86 ntBASIC0.31□□□□□ -2.36
Ddx28Q9CWT6 Gm25680-201ENSMUST00000116917 126 ntBASIC0.31□□□□□ -2.36
Ddx28Q9CWT6 Gm22635-201ENSMUST00000116962 126 ntBASIC0.31□□□□□ -2.36
Ddx28Q9CWT6 Gm24649-201ENSMUST00000157106 134 ntBASIC0.31□□□□□ -2.36
Ddx28Q9CWT6 Gm23601-201ENSMUST00000157259 131 ntBASIC0.31□□□□□ -2.36
Ddx28Q9CWT6 Gm24009-201ENSMUST00000157734 93 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 256 ms