Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm22744-201ENSMUST00000083444 65 ntBASIC-0.85□□□□□ -2.55
Use1Q9CQ56 Gm23347-201ENSMUST00000083823 82 ntBASIC-0.85□□□□□ -2.55
Use1Q9CQ56 Gm23080-201ENSMUST00000157846 103 ntBASIC-0.86□□□□□ -2.55
Use1Q9CQ56 Gm26007-201ENSMUST00000158798 120 ntBASIC-0.86□□□□□ -2.55
Use1Q9CQ56 Gm27476-201ENSMUST00000183366 104 ntBASIC-0.86□□□□□ -2.55
Use1Q9CQ56 Mir302d-201ENSMUST00000083513 66 ntBASIC-0.86□□□□□ -2.55
Use1Q9CQ56 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.86□□□□□ -2.55
Use1Q9CQ56 AC129019.2-201ENSMUST00000222063 202 ntBASIC-0.87□□□□□ -2.55
Use1Q9CQ56 Gm11694-201ENSMUST00000118637 159 ntBASIC-0.88□□□□□ -2.55
Use1Q9CQ56 Gm25160-201ENSMUST00000158914 102 ntBASIC-0.88□□□□□ -2.55
Use1Q9CQ56 AC165157.3-201ENSMUST00000220815 103 ntBASIC-0.88□□□□□ -2.55
Use1Q9CQ56 mt-Ti-201ENSMUST00000082393 69 ntBASIC-0.88□□□□□ -2.55
Use1Q9CQ56 Mir466p-201ENSMUST00000103925 89 ntBASIC-0.89□□□□□ -2.55
Use1Q9CQ56 Gm23654-201ENSMUST00000116758 126 ntBASIC-0.89□□□□□ -2.55
Use1Q9CQ56 Mir669i-201ENSMUST00000117007 127 ntBASIC-0.89□□□□□ -2.55
Use1Q9CQ56 Gm14502-201ENSMUST00000118154 113 ntBASIC-0.89□□□□□ -2.55
Use1Q9CQ56 Gm22145-201ENSMUST00000157396 148 ntBASIC-0.89□□□□□ -2.55
Use1Q9CQ56 Gm24455-201ENSMUST00000083348 131 ntBASIC-0.89□□□□□ -2.55
Use1Q9CQ56 Gm24445-201ENSMUST00000083981 107 ntBASIC-0.89□□□□□ -2.55
Use1Q9CQ56 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC-0.9□□□□□ -2.55
Use1Q9CQ56 Gm25366-201ENSMUST00000158845 124 ntBASIC-0.9□□□□□ -2.55
Use1Q9CQ56 Mir3094-201ENSMUST00000175121 64 ntBASIC-0.9□□□□□ -2.55
Use1Q9CQ56 Gm23047-201ENSMUST00000177661 94 ntBASIC-0.9□□□□□ -2.55
Use1Q9CQ56 Mir3970-201ENSMUST00000199287 90 ntBASIC-0.9□□□□□ -2.55
Use1Q9CQ56 Gm23012-201ENSMUST00000104149 83 ntBASIC-0.91□□□□□ -2.56
Use1Q9CQ56 Mir378c-201ENSMUST00000184478 99 ntBASIC-0.91□□□□□ -2.56
Use1Q9CQ56 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC-0.91□□□□□ -2.56
Use1Q9CQ56 Gm24508-201ENSMUST00000180104 107 ntBASIC-0.92□□□□□ -2.56
Use1Q9CQ56 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.92□□□□□ -2.56
Use1Q9CQ56 Gm23892-201ENSMUST00000158105 130 ntBASIC-0.93□□□□□ -2.56
Use1Q9CQ56 Gm25249-201ENSMUST00000175471 78 ntBASIC-0.93□□□□□ -2.56
Use1Q9CQ56 Mir6951-201ENSMUST00000183910 75 ntBASIC-0.93□□□□□ -2.56
Use1Q9CQ56 AC124687.1-201ENSMUST00000221868 189 ntBASIC-0.93□□□□□ -2.56
Use1Q9CQ56 AC124739.2-201ENSMUST00000222201 109 ntBASIC-0.93□□□□□ -2.56
Use1Q9CQ56 Gm23679-201ENSMUST00000083161 119 ntBASIC-0.93□□□□□ -2.56
Use1Q9CQ56 Gm24894-201ENSMUST00000122744 118 ntBASIC-0.94□□□□□ -2.56
Use1Q9CQ56 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC-0.94□□□□□ -2.56
Use1Q9CQ56 n-R5s96-201ENSMUST00000082574 124 ntBASIC-0.94□□□□□ -2.56
Use1Q9CQ56 Gm25184-201ENSMUST00000157753 163 ntBASIC-0.95□□□□□ -2.56
Use1Q9CQ56 Gm44490-201ENSMUST00000198566 127 ntBASIC-0.95□□□□□ -2.56
Use1Q9CQ56 AC122320.1-201ENSMUST00000227233 105 ntBASIC-0.95□□□□□ -2.56
Use1Q9CQ56 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC-0.96□□□□□ -2.56
Use1Q9CQ56 mt-Tr-201ENSMUST00000082412 68 ntBASIC-0.96□□□□□ -2.56
Use1Q9CQ56 Snord61-201ENSMUST00000083176 71 ntBASIC-0.96□□□□□ -2.56
Use1Q9CQ56 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.96□□□□□ -2.56
Use1Q9CQ56 Gm24593-201ENSMUST00000122507 106 ntBASIC-0.97□□□□□ -2.56
Use1Q9CQ56 Mir3101-201ENSMUST00000175607 88 ntBASIC-0.97□□□□□ -2.56
Use1Q9CQ56 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-0.98□□□□□ -2.57
Use1Q9CQ56 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.98□□□□□ -2.57
Use1Q9CQ56 AL603630.1-201ENSMUST00000214781 147 ntBASIC-0.98□□□□□ -2.57
Use1Q9CQ56 mt-Ta-201ENSMUST00000082398 69 ntBASIC-0.98□□□□□ -2.57
Use1Q9CQ56 Snora62-201ENSMUST00000082991 149 ntBASIC-0.98□□□□□ -2.57
Use1Q9CQ56 Mir96-201ENSMUST00000083652 106 ntBASIC-0.98□□□□□ -2.57
Use1Q9CQ56 Gm25497-201ENSMUST00000104425 132 ntBASIC-0.99□□□□□ -2.57
Use1Q9CQ56 Gm22542-201ENSMUST00000158166 95 ntBASIC-0.99□□□□□ -2.57
Use1Q9CQ56 Mir669m-1-201ENSMUST00000158945 98 ntBASIC-0.99□□□□□ -2.57
Use1Q9CQ56 Gm27792-201ENSMUST00000184031 115 ntBASIC-0.99□□□□□ -2.57
Use1Q9CQ56 Snord67-201ENSMUST00000104033 111 ntBASIC-1□□□□□ -2.57
Use1Q9CQ56 Gm25596-201ENSMUST00000178368 107 ntBASIC-1□□□□□ -2.57
Use1Q9CQ56 Gm38295-201ENSMUST00000191951 151 ntBASIC-1□□□□□ -2.57
Use1Q9CQ56 AL606472.1-201ENSMUST00000224628 275 ntBASIC-1□□□□□ -2.57
Use1Q9CQ56 Gm22476-201ENSMUST00000158902 100 ntBASIC-1.01□□□□□ -2.57
Use1Q9CQ56 Gm44338-201ENSMUST00000198614 110 ntBASIC-1.01□□□□□ -2.57
Use1Q9CQ56 Gm23056-201ENSMUST00000082803 111 ntBASIC-1.01□□□□□ -2.57
Use1Q9CQ56 Gm25749-201ENSMUST00000175485 111 ntBASIC-1.02□□□□□ -2.57
Use1Q9CQ56 Gm27845-201ENSMUST00000184479 114 ntBASIC-1.02□□□□□ -2.57
Use1Q9CQ56 Gm37845-201ENSMUST00000194977 355 ntBASIC-1.02□□□□□ -2.57
Use1Q9CQ56 Gm42623-201ENSMUST00000197225 379 ntBASIC-1.02□□□□□ -2.57
Use1Q9CQ56 Gm43907-201ENSMUST00000203128 117 ntBASIC-1.02□□□□□ -2.57
Use1Q9CQ56 Gm22148-201ENSMUST00000104445 107 ntBASIC-1.03□□□□□ -2.57
Use1Q9CQ56 Gm23545-201ENSMUST00000158205 104 ntBASIC-1.03□□□□□ -2.57
Use1Q9CQ56 Gm24524-201ENSMUST00000082925 170 ntBASIC-1.03□□□□□ -2.57
Use1Q9CQ56 Gm22827-201ENSMUST00000083766 107 ntBASIC-1.03□□□□□ -2.57
Use1Q9CQ56 n-R5s8-201ENSMUST00000104121 118 ntBASIC-1.04□□□□□ -2.58
Use1Q9CQ56 Gm24232-201ENSMUST00000104314 132 ntBASIC-1.04□□□□□ -2.58
Use1Q9CQ56 Snord2-201ENSMUST00000157899 69 ntBASIC-1.04□□□□□ -2.58
Use1Q9CQ56 Gm25472-201ENSMUST00000175454 78 ntBASIC-1.04□□□□□ -2.58
Use1Q9CQ56 Mir18b-201ENSMUST00000103923 83 ntBASIC-1.05□□□□□ -2.58
Use1Q9CQ56 Gm25522-201ENSMUST00000158394 105 ntBASIC-1.05□□□□□ -2.58
Use1Q9CQ56 Gm25654-201ENSMUST00000158467 88 ntBASIC-1.05□□□□□ -2.58
Use1Q9CQ56 Mir5124b-201ENSMUST00000184251 85 ntBASIC-1.05□□□□□ -2.58
Use1Q9CQ56 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC-1.06□□□□□ -2.58
Use1Q9CQ56 Gm44489-201ENSMUST00000104619 97 ntBASIC-1.06□□□□□ -2.58
Use1Q9CQ56 Ighv15-1-201ENSMUST00000194450 276 ntBASIC-1.06□□□□□ -2.58
Use1Q9CQ56 Gm23253-201ENSMUST00000157441 104 ntBASIC-1.07□□□□□ -2.58
Use1Q9CQ56 Gm23065-201ENSMUST00000158236 130 ntBASIC-1.07□□□□□ -2.58
Use1Q9CQ56 Mir488-201ENSMUST00000093595 109 ntBASIC-1.07□□□□□ -2.58
Use1Q9CQ56 Mir1a-2-201ENSMUST00000198520 72 ntBASIC-1.08□□□□□ -2.58
Use1Q9CQ56 Gm22169-201ENSMUST00000083229 107 ntBASIC-1.08□□□□□ -2.58
Use1Q9CQ56 Mir141-201ENSMUST00000083540 72 ntBASIC-1.08□□□□□ -2.58
Use1Q9CQ56 Gm25993-201ENSMUST00000175391 80 ntBASIC-1.09□□□□□ -2.58
Use1Q9CQ56 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC-1.09□□□□□ -2.58
Use1Q9CQ56 Gm22813-202ENSMUST00000200346 124 ntBASIC-1.09□□□□□ -2.58
Use1Q9CQ56 Gm25055-201ENSMUST00000157369 76 ntBASIC-1.1□□□□□ -2.59
Use1Q9CQ56 Gm25772-201ENSMUST00000158574 56 ntBASIC-1.1□□□□□ -2.59
Use1Q9CQ56 Gm44311-201ENSMUST00000196448 69 ntBASIC-1.1□□□□□ -2.59
Use1Q9CQ56 Snord49b-201ENSMUST00000082503 72 ntBASIC-1.1□□□□□ -2.59
Use1Q9CQ56 Mir764-201ENSMUST00000103259 108 ntBASIC-1.11□□□□□ -2.59
Use1Q9CQ56 Gm24132-201ENSMUST00000104745 91 ntBASIC-1.11□□□□□ -2.59
Use1Q9CQ56 Gm11936-201ENSMUST00000118323 160 ntBASIC-1.11□□□□□ -2.59
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms