Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Gm23445-201ENSMUST00000082800 107 ntBASIC0.05□□□□□ -2.4
Sf3b1Q99NB9 Snora75-201ENSMUST00000082903 133 ntBASIC0.05□□□□□ -2.4
Sf3b1Q99NB9 Gm25136-201ENSMUST00000083253 115 ntBASIC0.05□□□□□ -2.4
Sf3b1Q99NB9 Gm24233-201ENSMUST00000104317 122 ntBASIC0.04□□□□□ -2.4
Sf3b1Q99NB9 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.04□□□□□ -2.4
Sf3b1Q99NB9 Gm14837-201ENSMUST00000119688 206 ntBASIC0.04□□□□□ -2.4
Sf3b1Q99NB9 Gm22989-201ENSMUST00000158313 86 ntBASIC0.04□□□□□ -2.4
Sf3b1Q99NB9 Gm24129-201ENSMUST00000158537 97 ntBASIC0.04□□□□□ -2.4
Sf3b1Q99NB9 Gm22139-201ENSMUST00000158747 105 ntBASIC0.04□□□□□ -2.4
Sf3b1Q99NB9 Mir8107-201ENSMUST00000184024 117 ntBASIC0.04□□□□□ -2.4
Sf3b1Q99NB9 Gm44602-201ENSMUST00000205948 132 ntBASIC0.04□□□□□ -2.4
Sf3b1Q99NB9 mt-Td-201ENSMUST00000082404 70 ntBASIC0.04□□□□□ -2.4
Sf3b1Q99NB9 Gm24835-201ENSMUST00000116777 111 ntBASIC0.03□□□□□ -2.4
Sf3b1Q99NB9 Gm22337-201ENSMUST00000157721 132 ntBASIC0.03□□□□□ -2.4
Sf3b1Q99NB9 Gm22967-201ENSMUST00000157956 239 ntBASIC0.03□□□□□ -2.4
Sf3b1Q99NB9 Gm24131-201ENSMUST00000158539 107 ntBASIC0.03□□□□□ -2.4
Sf3b1Q99NB9 Gm27694-201ENSMUST00000184740 86 ntBASIC0.03□□□□□ -2.4
Sf3b1Q99NB9 Gm44345-201ENSMUST00000199560 135 ntBASIC0.03□□□□□ -2.4
Sf3b1Q99NB9 Gm23509-201ENSMUST00000083080 160 ntBASIC0.03□□□□□ -2.4
Sf3b1Q99NB9 Gm25497-201ENSMUST00000104425 132 ntBASIC0.02□□□□□ -2.41
Sf3b1Q99NB9 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
Sf3b1Q99NB9 Gm42845-201ENSMUST00000197766 105 ntBASIC0.02□□□□□ -2.41
Sf3b1Q99NB9 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.02□□□□□ -2.41
Sf3b1Q99NB9 Gm25040-201ENSMUST00000103877 66 ntBASIC0.01□□□□□ -2.41
Sf3b1Q99NB9 Gm22373-201ENSMUST00000104584 89 ntBASIC0.01□□□□□ -2.41
Sf3b1Q99NB9 Mir466h-201ENSMUST00000104748 81 ntBASIC0.01□□□□□ -2.41
Sf3b1Q99NB9 Gm23661-201ENSMUST00000122630 87 ntBASIC0.01□□□□□ -2.41
Sf3b1Q99NB9 Gm23253-201ENSMUST00000157441 104 ntBASIC0.01□□□□□ -2.41
Sf3b1Q99NB9 Gm24054-201ENSMUST00000158619 105 ntBASIC0.01□□□□□ -2.41
Sf3b1Q99NB9 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC0.01□□□□□ -2.41
Sf3b1Q99NB9 Gm22699-201ENSMUST00000175376 105 ntBASIC0.01□□□□□ -2.41
Sf3b1Q99NB9 Mir466b-1-201ENSMUST00000177988 82 ntBASIC0.01□□□□□ -2.41
Sf3b1Q99NB9 Gm26398-201ENSMUST00000179015 127 ntBASIC0.01□□□□□ -2.41
Sf3b1Q99NB9 Gm22981-201ENSMUST00000082611 75 ntBASIC0.01□□□□□ -2.41
Sf3b1Q99NB9 Gm23423-201ENSMUST00000082782 106 ntBASIC0.01□□□□□ -2.41
Sf3b1Q99NB9 Gm25703-201ENSMUST00000083123 151 ntBASIC0.01□□□□□ -2.41
Sf3b1Q99NB9 Gm26421-201ENSMUST00000104279 132 ntBASIC0□□□□□ -2.41
Sf3b1Q99NB9 Gm26011-201ENSMUST00000104410 104 ntBASIC0□□□□□ -2.41
Sf3b1Q99NB9 Gm22048-201ENSMUST00000104721 89 ntBASIC0□□□□□ -2.41
Sf3b1Q99NB9 Gm37545-201ENSMUST00000186512 148 ntBASIC0□□□□□ -2.41
Sf3b1Q99NB9 Gm37746-201ENSMUST00000193249 198 ntBASIC0□□□□□ -2.41
Sf3b1Q99NB9 Gm44338-201ENSMUST00000198614 110 ntBASIC0□□□□□ -2.41
Sf3b1Q99NB9 Mir18-201ENSMUST00000083469 96 ntBASIC0□□□□□ -2.41
Sf3b1Q99NB9 Gm22368-201ENSMUST00000102416 109 ntBASIC-0.01□□□□□ -2.41
Sf3b1Q99NB9 Gm25885-201ENSMUST00000157779 109 ntBASIC-0.01□□□□□ -2.41
Sf3b1Q99NB9 Gm24903-201ENSMUST00000158131 126 ntBASIC-0.01□□□□□ -2.41
Sf3b1Q99NB9 Gm25974-201ENSMUST00000158701 94 ntBASIC-0.01□□□□□ -2.41
Sf3b1Q99NB9 Gm38208-201ENSMUST00000192476 114 ntBASIC-0.01□□□□□ -2.41
Sf3b1Q99NB9 Gm44327-201ENSMUST00000200068 117 ntBASIC-0.01□□□□□ -2.41
Sf3b1Q99NB9 Gm24457-201ENSMUST00000083196 105 ntBASIC-0.01□□□□□ -2.41
Sf3b1Q99NB9 Gm22652-201ENSMUST00000083207 131 ntBASIC-0.01□□□□□ -2.41
Sf3b1Q99NB9 Mir382-201ENSMUST00000083494 76 ntBASIC-0.01□□□□□ -2.41
Sf3b1Q99NB9 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC-0.01□□□□□ -2.41
Sf3b1Q99NB9 Gm25006-201ENSMUST00000083813 107 ntBASIC-0.01□□□□□ -2.41
Sf3b1Q99NB9 Mir764-201ENSMUST00000103259 108 ntBASIC-0.02□□□□□ -2.41
Sf3b1Q99NB9 Gm24246-201ENSMUST00000157315 132 ntBASIC-0.02□□□□□ -2.41
Sf3b1Q99NB9 Gm24073-201ENSMUST00000158177 106 ntBASIC-0.02□□□□□ -2.41
Sf3b1Q99NB9 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.02□□□□□ -2.41
Sf3b1Q99NB9 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.02□□□□□ -2.41
Sf3b1Q99NB9 Gm23947-201ENSMUST00000093636 107 ntBASIC-0.02□□□□□ -2.41
Sf3b1Q99NB9 Gm25309-201ENSMUST00000116728 126 ntBASIC-0.03□□□□□ -2.41
Sf3b1Q99NB9 Gm11694-201ENSMUST00000118637 159 ntBASIC-0.03□□□□□ -2.41
Sf3b1Q99NB9 Gm25056-201ENSMUST00000157372 62 ntBASIC-0.03□□□□□ -2.41
Sf3b1Q99NB9 Gm25060-201ENSMUST00000157374 130 ntBASIC-0.03□□□□□ -2.41
Sf3b1Q99NB9 Gm25599-201ENSMUST00000157816 103 ntBASIC-0.03□□□□□ -2.41
Sf3b1Q99NB9 Gm26202-201ENSMUST00000082910 65 ntBASIC-0.03□□□□□ -2.41
Sf3b1Q99NB9 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.04□□□□□ -2.42
Sf3b1Q99NB9 Gm24009-201ENSMUST00000157734 93 ntBASIC-0.04□□□□□ -2.42
Sf3b1Q99NB9 Gm22621-201ENSMUST00000179678 74 ntBASIC-0.04□□□□□ -2.42
Sf3b1Q99NB9 Gm27297-201ENSMUST00000183395 105 ntBASIC-0.04□□□□□ -2.42
Sf3b1Q99NB9 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.04□□□□□ -2.42
Sf3b1Q99NB9 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.04□□□□□ -2.42
Sf3b1Q99NB9 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.04□□□□□ -2.42
Sf3b1Q99NB9 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-0.04□□□□□ -2.42
Sf3b1Q99NB9 Mir216b-201ENSMUST00000102363 86 ntBASIC-0.05□□□□□ -2.42
Sf3b1Q99NB9 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
Sf3b1Q99NB9 Gm26091-201ENSMUST00000122704 82 ntBASIC-0.05□□□□□ -2.42
Sf3b1Q99NB9 Gm23036-201ENSMUST00000157885 99 ntBASIC-0.05□□□□□ -2.42
Sf3b1Q99NB9 Gm25716-201ENSMUST00000158628 104 ntBASIC-0.05□□□□□ -2.42
Sf3b1Q99NB9 Gm23337-201ENSMUST00000158959 118 ntBASIC-0.05□□□□□ -2.42
Sf3b1Q99NB9 Traj61-201ENSMUST00000165025 72 ntBASIC-0.05□□□□□ -2.42
Sf3b1Q99NB9 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.05□□□□□ -2.42
Sf3b1Q99NB9 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.05□□□□□ -2.42
Sf3b1Q99NB9 Gm25565-201ENSMUST00000104605 105 ntBASIC-0.06□□□□□ -2.42
Sf3b1Q99NB9 Gm23990-201ENSMUST00000117031 117 ntBASIC-0.06□□□□□ -2.42
Sf3b1Q99NB9 Gm22788-201ENSMUST00000157876 61 ntBASIC-0.06□□□□□ -2.42
Sf3b1Q99NB9 Mir1966-201ENSMUST00000158807 108 ntBASIC-0.06□□□□□ -2.42
Sf3b1Q99NB9 Mir21c-201ENSMUST00000184910 78 ntBASIC-0.06□□□□□ -2.42
Sf3b1Q99NB9 Gm25797-201ENSMUST00000082640 107 ntBASIC-0.06□□□□□ -2.42
Sf3b1Q99NB9 Snord90-201ENSMUST00000104568 111 ntBASIC-0.07□□□□□ -2.42
Sf3b1Q99NB9 Gm23654-201ENSMUST00000116758 126 ntBASIC-0.07□□□□□ -2.42
Sf3b1Q99NB9 Gm25680-201ENSMUST00000116917 126 ntBASIC-0.07□□□□□ -2.42
Sf3b1Q99NB9 Gm22635-201ENSMUST00000116962 126 ntBASIC-0.07□□□□□ -2.42
Sf3b1Q99NB9 n-R5s39-201ENSMUST00000122613 108 ntBASIC-0.07□□□□□ -2.42
Sf3b1Q99NB9 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.07□□□□□ -2.42
Sf3b1Q99NB9 Gm23852-201ENSMUST00000158376 77 ntBASIC-0.07□□□□□ -2.42
Sf3b1Q99NB9 Mir3473d-201ENSMUST00000175346 81 ntBASIC-0.07□□□□□ -2.42
Sf3b1Q99NB9 Gm23864-201ENSMUST00000177607 107 ntBASIC-0.07□□□□□ -2.42
Sf3b1Q99NB9 Mir3967-201ENSMUST00000198710 68 ntBASIC-0.07□□□□□ -2.42
Sf3b1Q99NB9 Gm44353-201ENSMUST00000200618 138 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 76,532 protein–RNA pairs in 143.4 ms