Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm25618-201ENSMUST00000179484 107 ntBASIC1.78□□□□□ -2.12
Clp1Q99LI9 Mir6390-201ENSMUST00000184405 129 ntBASIC1.78□□□□□ -2.12
Clp1Q99LI9 Gm43911-201ENSMUST00000203097 76 ntBASIC1.78□□□□□ -2.12
Clp1Q99LI9 mt-Tc-201ENSMUST00000082400 66 ntBASIC1.78□□□□□ -2.12
Clp1Q99LI9 Mir320-201ENSMUST00000083594 82 ntBASIC1.78□□□□□ -2.12
Clp1Q99LI9 Gm23344-201ENSMUST00000083818 68 ntBASIC1.78□□□□□ -2.12
Clp1Q99LI9 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Clp1Q99LI9 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC1.77□□□□□ -2.13
Clp1Q99LI9 Mir6995-201ENSMUST00000183658 71 ntBASIC1.77□□□□□ -2.13
Clp1Q99LI9 Gm27894-201ENSMUST00000184177 92 ntBASIC1.77□□□□□ -2.13
Clp1Q99LI9 Gm43944-201ENSMUST00000205220 120 ntBASIC1.77□□□□□ -2.13
Clp1Q99LI9 Gm45754-201ENSMUST00000212380 279 ntBASIC1.77□□□□□ -2.13
Clp1Q99LI9 Mir1a-1-201ENSMUST00000093635 77 ntBASIC1.77□□□□□ -2.13
Clp1Q99LI9 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
Clp1Q99LI9 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Clp1Q99LI9 Gm25022-201ENSMUST00000102205 83 ntBASIC1.76□□□□□ -2.13
Clp1Q99LI9 Gm23130-201ENSMUST00000104252 74 ntBASIC1.76□□□□□ -2.13
Clp1Q99LI9 Mir467a-6-201ENSMUST00000177790 83 ntBASIC1.76□□□□□ -2.13
Clp1Q99LI9 Mir467a-3-201ENSMUST00000178082 83 ntBASIC1.76□□□□□ -2.13
Clp1Q99LI9 Mir467a-7-201ENSMUST00000178635 83 ntBASIC1.76□□□□□ -2.13
Clp1Q99LI9 Mir467a-10-201ENSMUST00000179320 83 ntBASIC1.76□□□□□ -2.13
Clp1Q99LI9 Mir467a-5-201ENSMUST00000179352 83 ntBASIC1.76□□□□□ -2.13
Clp1Q99LI9 Mir467a-2-201ENSMUST00000179447 83 ntBASIC1.76□□□□□ -2.13
Clp1Q99LI9 Gm26466-201ENSMUST00000179615 79 ntBASIC1.76□□□□□ -2.13
Clp1Q99LI9 Mir467a-9-201ENSMUST00000179752 83 ntBASIC1.76□□□□□ -2.13
Clp1Q99LI9 Mir467a-4-201ENSMUST00000179923 83 ntBASIC1.76□□□□□ -2.13
Clp1Q99LI9 Mir467a-8-201ENSMUST00000180070 83 ntBASIC1.76□□□□□ -2.13
Clp1Q99LI9 Gm23881-201ENSMUST00000116872 66 ntBASIC1.75□□□□□ -2.13
Clp1Q99LI9 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC1.75□□□□□ -2.13
Clp1Q99LI9 Gm24222-201ENSMUST00000158834 93 ntBASIC1.75□□□□□ -2.13
Clp1Q99LI9 Gm28383-201ENSMUST00000187563 139 ntBASIC1.75□□□□□ -2.13
Clp1Q99LI9 AC132833.2-201ENSMUST00000228699 157 ntBASIC1.75□□□□□ -2.13
Clp1Q99LI9 Gm23038-201ENSMUST00000083873 104 ntBASIC1.75□□□□□ -2.13
Clp1Q99LI9 Gm16399-201ENSMUST00000181423 219 ntBASIC1.74□□□□□ -2.13
Clp1Q99LI9 Mir7665-201ENSMUST00000184907 63 ntBASIC1.74□□□□□ -2.13
Clp1Q99LI9 Gm25759-201ENSMUST00000103988 129 ntBASIC1.73□□□□□ -2.13
Clp1Q99LI9 Gm24547-201ENSMUST00000158649 149 ntBASIC1.73□□□□□ -2.13
Clp1Q99LI9 Gm44469-201ENSMUST00000198558 79 ntBASIC1.73□□□□□ -2.13
Clp1Q99LI9 AC166341.8-201ENSMUST00000221267 108 ntBASIC1.73□□□□□ -2.13
Clp1Q99LI9 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.73□□□□□ -2.13
Clp1Q99LI9 Gm24783-201ENSMUST00000157639 100 ntBASIC1.72□□□□□ -2.13
Clp1Q99LI9 Gm22770-201ENSMUST00000158368 67 ntBASIC1.72□□□□□ -2.13
Clp1Q99LI9 Gm26082-201ENSMUST00000104070 127 ntBASIC1.71□□□□□ -2.14
Clp1Q99LI9 Gm15115-201ENSMUST00000121145 264 ntBASIC1.71□□□□□ -2.14
Clp1Q99LI9 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
Clp1Q99LI9 Gm26274-201ENSMUST00000157103 321 ntBASIC1.71□□□□□ -2.14
Clp1Q99LI9 Gm24808-201ENSMUST00000157993 118 ntBASIC1.71□□□□□ -2.14
Clp1Q99LI9 Gm22129-201ENSMUST00000179034 107 ntBASIC1.71□□□□□ -2.14
Clp1Q99LI9 Gm24165-201ENSMUST00000082718 128 ntBASIC1.71□□□□□ -2.14
Clp1Q99LI9 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.7□□□□□ -2.14
Clp1Q99LI9 Gm24271-201ENSMUST00000102327 111 ntBASIC1.7□□□□□ -2.14
Clp1Q99LI9 Gm27993-201ENSMUST00000184362 85 ntBASIC1.7□□□□□ -2.14
Clp1Q99LI9 Gm44932-201ENSMUST00000206799 121 ntBASIC1.7□□□□□ -2.14
Clp1Q99LI9 Gm22753-201ENSMUST00000083657 107 ntBASIC1.7□□□□□ -2.14
Clp1Q99LI9 Gm22233-201ENSMUST00000157464 114 ntBASIC1.69□□□□□ -2.14
Clp1Q99LI9 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.69□□□□□ -2.14
Clp1Q99LI9 Gm25868-201ENSMUST00000158253 114 ntBASIC1.69□□□□□ -2.14
Clp1Q99LI9 Mir1933-201ENSMUST00000158930 88 ntBASIC1.69□□□□□ -2.14
Clp1Q99LI9 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Clp1Q99LI9 Gm36956-201ENSMUST00000193830 214 ntBASIC1.69□□□□□ -2.14
Clp1Q99LI9 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.69□□□□□ -2.14
Clp1Q99LI9 mt-Tn-201ENSMUST00000082399 71 ntBASIC1.69□□□□□ -2.14
Clp1Q99LI9 Gm23790-201ENSMUST00000083013 107 ntBASIC1.69□□□□□ -2.14
Clp1Q99LI9 Gm25992-201ENSMUST00000102437 109 ntBASIC1.68□□□□□ -2.14
Clp1Q99LI9 Gm24984-201ENSMUST00000104454 133 ntBASIC1.68□□□□□ -2.14
Clp1Q99LI9 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Clp1Q99LI9 Gm26133-201ENSMUST00000157363 100 ntBASIC1.68□□□□□ -2.14
Clp1Q99LI9 Gm44488-201ENSMUST00000199467 119 ntBASIC1.68□□□□□ -2.14
Clp1Q99LI9 Gm25851-201ENSMUST00000082794 107 ntBASIC1.68□□□□□ -2.14
Clp1Q99LI9 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.68□□□□□ -2.14
Clp1Q99LI9 Gm11694-201ENSMUST00000118637 159 ntBASIC1.67□□□□□ -2.14
Clp1Q99LI9 Gm23900-201ENSMUST00000157569 108 ntBASIC1.67□□□□□ -2.14
Clp1Q99LI9 Gm25014-201ENSMUST00000158401 103 ntBASIC1.67□□□□□ -2.14
Clp1Q99LI9 Gm23339-201ENSMUST00000158962 139 ntBASIC1.67□□□□□ -2.14
Clp1Q99LI9 Gm10548-202ENSMUST00000165672 272 ntBASIC1.67□□□□□ -2.14
Clp1Q99LI9 Mir3968-201ENSMUST00000175355 100 ntBASIC1.67□□□□□ -2.14
Clp1Q99LI9 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.67□□□□□ -2.14
Clp1Q99LI9 Gm25899-201ENSMUST00000082672 141 ntBASIC1.67□□□□□ -2.14
Clp1Q99LI9 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Clp1Q99LI9 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Clp1Q99LI9 Gm24476-201ENSMUST00000157437 131 ntBASIC1.66□□□□□ -2.14
Clp1Q99LI9 Gm24801-201ENSMUST00000178503 105 ntBASIC1.66□□□□□ -2.14
Clp1Q99LI9 Mir8119-201ENSMUST00000183371 129 ntBASIC1.66□□□□□ -2.14
Clp1Q99LI9 Mir30a-201ENSMUST00000083471 71 ntBASIC1.66□□□□□ -2.14
Clp1Q99LI9 Gm22673-201ENSMUST00000104415 131 ntBASIC1.65□□□□□ -2.15
Clp1Q99LI9 Mir6240-201ENSMUST00000184281 117 ntBASIC1.65□□□□□ -2.15
Clp1Q99LI9 Gm44602-201ENSMUST00000205948 132 ntBASIC1.65□□□□□ -2.15
Clp1Q99LI9 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Clp1Q99LI9 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Clp1Q99LI9 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Clp1Q99LI9 Gm22729-201ENSMUST00000158088 129 ntBASIC1.64□□□□□ -2.15
Clp1Q99LI9 Gm23261-201ENSMUST00000158316 136 ntBASIC1.64□□□□□ -2.15
Clp1Q99LI9 Gm23857-201ENSMUST00000158379 111 ntBASIC1.64□□□□□ -2.15
Clp1Q99LI9 Gm23349-201ENSMUST00000158432 98 ntBASIC1.64□□□□□ -2.15
Clp1Q99LI9 Gm22466-201ENSMUST00000175278 69 ntBASIC1.64□□□□□ -2.15
Clp1Q99LI9 Mir5619-201ENSMUST00000176065 61 ntBASIC1.64□□□□□ -2.15
Clp1Q99LI9 Mir6237-201ENSMUST00000183808 91 ntBASIC1.64□□□□□ -2.15
Clp1Q99LI9 Mir6962-201ENSMUST00000199512 63 ntBASIC1.64□□□□□ -2.15
Clp1Q99LI9 Gm45197-201ENSMUST00000205288 151 ntBASIC1.64□□□□□ -2.15
Clp1Q99LI9 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC1.64□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 200.6 ms