Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gm26338-201ENSMUST00000102372 110 ntBASIC0.85□□□□□ -2.27
H1fooQ8VIK3 Gm25274-201ENSMUST00000104296 135 ntBASIC0.85□□□□□ -2.27
H1fooQ8VIK3 Gm23351-201ENSMUST00000158427 125 ntBASIC0.85□□□□□ -2.27
H1fooQ8VIK3 Gm23384-201ENSMUST00000158593 103 ntBASIC0.85□□□□□ -2.27
H1fooQ8VIK3 Gm28270-201ENSMUST00000188550 109 ntBASIC0.85□□□□□ -2.27
H1fooQ8VIK3 Gm28328-201ENSMUST00000188869 109 ntBASIC0.85□□□□□ -2.27
H1fooQ8VIK3 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC0.85□□□□□ -2.27
H1fooQ8VIK3 Gm23507-201ENSMUST00000083078 107 ntBASIC0.85□□□□□ -2.27
H1fooQ8VIK3 Mir22-201ENSMUST00000083595 95 ntBASIC0.85□□□□□ -2.27
H1fooQ8VIK3 Gm22149-201ENSMUST00000104442 136 ntBASIC0.84□□□□□ -2.27
H1fooQ8VIK3 Gm12432-201ENSMUST00000119540 186 ntBASIC0.84□□□□□ -2.27
H1fooQ8VIK3 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.84□□□□□ -2.27
H1fooQ8VIK3 Mir100-201ENSMUST00000175270 80 ntBASIC0.84□□□□□ -2.27
H1fooQ8VIK3 Mir369-201ENSMUST00000083627 79 ntBASIC0.84□□□□□ -2.27
H1fooQ8VIK3 Gm25089-201ENSMUST00000102015 79 ntBASIC0.83□□□□□ -2.28
H1fooQ8VIK3 Gm23328-201ENSMUST00000157418 132 ntBASIC0.83□□□□□ -2.28
H1fooQ8VIK3 Gm24678-201ENSMUST00000158756 104 ntBASIC0.83□□□□□ -2.28
H1fooQ8VIK3 Gm25693-201ENSMUST00000175443 85 ntBASIC0.83□□□□□ -2.28
H1fooQ8VIK3 Gm25840-201ENSMUST00000177821 79 ntBASIC0.83□□□□□ -2.28
H1fooQ8VIK3 Gm24952-201ENSMUST00000177909 79 ntBASIC0.83□□□□□ -2.28
H1fooQ8VIK3 Gm23682-201ENSMUST00000178146 79 ntBASIC0.83□□□□□ -2.28
H1fooQ8VIK3 Gm24652-201ENSMUST00000178223 79 ntBASIC0.83□□□□□ -2.28
H1fooQ8VIK3 Gm22629-201ENSMUST00000178272 79 ntBASIC0.83□□□□□ -2.28
H1fooQ8VIK3 Gm24021-201ENSMUST00000178435 79 ntBASIC0.83□□□□□ -2.28
H1fooQ8VIK3 Gm22274-201ENSMUST00000178441 79 ntBASIC0.83□□□□□ -2.28
H1fooQ8VIK3 Gm22050-201ENSMUST00000178442 79 ntBASIC0.83□□□□□ -2.28
H1fooQ8VIK3 Gm23688-201ENSMUST00000178502 79 ntBASIC0.83□□□□□ -2.28
H1fooQ8VIK3 Gm23944-201ENSMUST00000178607 79 ntBASIC0.83□□□□□ -2.28
H1fooQ8VIK3 Gm26283-201ENSMUST00000178625 79 ntBASIC0.83□□□□□ -2.28
H1fooQ8VIK3 Gm25452-201ENSMUST00000178776 79 ntBASIC0.83□□□□□ -2.28
H1fooQ8VIK3 Gm23286-201ENSMUST00000178963 79 ntBASIC0.83□□□□□ -2.28
H1fooQ8VIK3 Gm22640-201ENSMUST00000179035 79 ntBASIC0.83□□□□□ -2.28
H1fooQ8VIK3 Gm25984-201ENSMUST00000179129 79 ntBASIC0.83□□□□□ -2.28
H1fooQ8VIK3 Gm25585-201ENSMUST00000179469 79 ntBASIC0.83□□□□□ -2.28
H1fooQ8VIK3 Gm26374-201ENSMUST00000179737 79 ntBASIC0.83□□□□□ -2.28
H1fooQ8VIK3 Gm24040-201ENSMUST00000179786 79 ntBASIC0.83□□□□□ -2.28
H1fooQ8VIK3 Gm25017-201ENSMUST00000179805 79 ntBASIC0.83□□□□□ -2.28
H1fooQ8VIK3 Gm23618-201ENSMUST00000179912 79 ntBASIC0.83□□□□□ -2.28
H1fooQ8VIK3 Gm26284-201ENSMUST00000180107 79 ntBASIC0.83□□□□□ -2.28
H1fooQ8VIK3 Gm24570-201ENSMUST00000180314 79 ntBASIC0.83□□□□□ -2.28
H1fooQ8VIK3 Gm24654-201ENSMUST00000180315 79 ntBASIC0.83□□□□□ -2.28
H1fooQ8VIK3 Gm38274-201ENSMUST00000195689 148 ntBASIC0.83□□□□□ -2.28
H1fooQ8VIK3 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
H1fooQ8VIK3 Gm25170-201ENSMUST00000104191 129 ntBASIC0.82□□□□□ -2.28
H1fooQ8VIK3 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.82□□□□□ -2.28
H1fooQ8VIK3 Gm24290-201ENSMUST00000157634 96 ntBASIC0.82□□□□□ -2.28
H1fooQ8VIK3 Gm23917-201ENSMUST00000175256 98 ntBASIC0.82□□□□□ -2.28
H1fooQ8VIK3 Mir7052-201ENSMUST00000184821 65 ntBASIC0.82□□□□□ -2.28
H1fooQ8VIK3 Mir196b-201ENSMUST00000083509 85 ntBASIC0.82□□□□□ -2.28
H1fooQ8VIK3 Mir362-201ENSMUST00000093592 65 ntBASIC0.82□□□□□ -2.28
H1fooQ8VIK3 Gm22544-201ENSMUST00000104349 127 ntBASIC0.81□□□□□ -2.28
H1fooQ8VIK3 Gm22031-201ENSMUST00000116945 126 ntBASIC0.81□□□□□ -2.28
H1fooQ8VIK3 Gm23989-201ENSMUST00000117030 66 ntBASIC0.81□□□□□ -2.28
H1fooQ8VIK3 Gm24894-201ENSMUST00000122744 118 ntBASIC0.81□□□□□ -2.28
H1fooQ8VIK3 Gm25768-201ENSMUST00000158570 98 ntBASIC0.81□□□□□ -2.28
H1fooQ8VIK3 Gm25976-201ENSMUST00000158695 130 ntBASIC0.81□□□□□ -2.28
H1fooQ8VIK3 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.81□□□□□ -2.28
H1fooQ8VIK3 Gm28435-201ENSMUST00000185496 108 ntBASIC0.81□□□□□ -2.28
H1fooQ8VIK3 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.81□□□□□ -2.28
H1fooQ8VIK3 Gm24705-201ENSMUST00000082808 107 ntBASIC0.81□□□□□ -2.28
H1fooQ8VIK3 Gm23654-201ENSMUST00000116758 126 ntBASIC0.8□□□□□ -2.28
H1fooQ8VIK3 Gm25887-201ENSMUST00000157777 84 ntBASIC0.8□□□□□ -2.28
H1fooQ8VIK3 Gm24500-201ENSMUST00000158447 124 ntBASIC0.8□□□□□ -2.28
H1fooQ8VIK3 Gm44602-201ENSMUST00000205948 132 ntBASIC0.8□□□□□ -2.28
H1fooQ8VIK3 AC160550.1-201ENSMUST00000228659 181 ntBASIC0.8□□□□□ -2.28
H1fooQ8VIK3 Snord33-201ENSMUST00000083694 84 ntBASIC0.8□□□□□ -2.28
H1fooQ8VIK3 Gm25683-201ENSMUST00000083940 131 ntBASIC0.8□□□□□ -2.28
H1fooQ8VIK3 Gm23203-201ENSMUST00000104374 107 ntBASIC0.79□□□□□ -2.28
H1fooQ8VIK3 Gm24468-201ENSMUST00000104489 104 ntBASIC0.79□□□□□ -2.28
H1fooQ8VIK3 Gm25629-201ENSMUST00000084001 107 ntBASIC0.79□□□□□ -2.28
H1fooQ8VIK3 Gm26369-201ENSMUST00000157825 100 ntBASIC0.78□□□□□ -2.28
H1fooQ8VIK3 Gm24942-201ENSMUST00000158328 114 ntBASIC0.78□□□□□ -2.28
H1fooQ8VIK3 Gm25600-201ENSMUST00000158357 106 ntBASIC0.78□□□□□ -2.28
H1fooQ8VIK3 Mir6380-201ENSMUST00000184334 81 ntBASIC0.78□□□□□ -2.28
H1fooQ8VIK3 Gm27656-201ENSMUST00000185055 80 ntBASIC0.78□□□□□ -2.28
H1fooQ8VIK3 Gm44301-201ENSMUST00000200362 143 ntBASIC0.78□□□□□ -2.28
H1fooQ8VIK3 Gm24624-201ENSMUST00000082617 164 ntBASIC0.78□□□□□ -2.28
H1fooQ8VIK3 Gm22828-201ENSMUST00000083768 107 ntBASIC0.78□□□□□ -2.28
H1fooQ8VIK3 Gm25378-201ENSMUST00000104333 129 ntBASIC0.77□□□□□ -2.29
H1fooQ8VIK3 Gm22319-201ENSMUST00000157147 122 ntBASIC0.77□□□□□ -2.29
H1fooQ8VIK3 Gm24129-201ENSMUST00000158537 97 ntBASIC0.77□□□□□ -2.29
H1fooQ8VIK3 Gm25978-201ENSMUST00000158698 90 ntBASIC0.77□□□□□ -2.29
H1fooQ8VIK3 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.77□□□□□ -2.29
H1fooQ8VIK3 Gm22070-201ENSMUST00000178475 107 ntBASIC0.77□□□□□ -2.29
H1fooQ8VIK3 Gm22003-201ENSMUST00000101885 107 ntBASIC0.76□□□□□ -2.29
H1fooQ8VIK3 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.76□□□□□ -2.29
H1fooQ8VIK3 Gm22030-201ENSMUST00000116942 63 ntBASIC0.76□□□□□ -2.29
H1fooQ8VIK3 Gm11694-201ENSMUST00000118637 159 ntBASIC0.76□□□□□ -2.29
H1fooQ8VIK3 Gm23601-201ENSMUST00000157259 131 ntBASIC0.76□□□□□ -2.29
H1fooQ8VIK3 Gm23340-201ENSMUST00000158955 123 ntBASIC0.76□□□□□ -2.29
H1fooQ8VIK3 Gm23410-201ENSMUST00000179967 107 ntBASIC0.76□□□□□ -2.29
H1fooQ8VIK3 Gm22756-201ENSMUST00000180118 107 ntBASIC0.76□□□□□ -2.29
H1fooQ8VIK3 Mir7010-201ENSMUST00000183464 63 ntBASIC0.76□□□□□ -2.29
H1fooQ8VIK3 Mir6342-201ENSMUST00000183870 125 ntBASIC0.76□□□□□ -2.29
H1fooQ8VIK3 Gm24524-201ENSMUST00000082925 170 ntBASIC0.76□□□□□ -2.29
H1fooQ8VIK3 Gm22505-201ENSMUST00000082956 108 ntBASIC0.76□□□□□ -2.29
H1fooQ8VIK3 Gm22363-201ENSMUST00000083100 108 ntBASIC0.76□□□□□ -2.29
H1fooQ8VIK3 Gm23814-201ENSMUST00000083230 102 ntBASIC0.76□□□□□ -2.29
H1fooQ8VIK3 Gm23095-201ENSMUST00000083446 107 ntBASIC0.76□□□□□ -2.29
H1fooQ8VIK3 Snord78-201ENSMUST00000104032 66 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 188.4 ms