Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 AC159093.2-201ENSMUST00000227881 297 ntBASIC1.62□□□□□ -2.15
Ccdc9Q8VC31 Gm22743-201ENSMUST00000083445 133 ntBASIC1.62□□□□□ -2.15
Ccdc9Q8VC31 Mir1a-1-201ENSMUST00000093635 77 ntBASIC1.62□□□□□ -2.15
Ccdc9Q8VC31 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.61□□□□□ -2.15
Ccdc9Q8VC31 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.61□□□□□ -2.15
Ccdc9Q8VC31 Gm25950-201ENSMUST00000175331 100 ntBASIC1.61□□□□□ -2.15
Ccdc9Q8VC31 Gm22458-201ENSMUST00000082576 107 ntBASIC1.61□□□□□ -2.15
Ccdc9Q8VC31 Mir451a-201ENSMUST00000093557 72 ntBASIC1.61□□□□□ -2.15
Ccdc9Q8VC31 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Ccdc9Q8VC31 Mir764-201ENSMUST00000103259 108 ntBASIC1.6□□□□□ -2.15
Ccdc9Q8VC31 Mir880-201ENSMUST00000104809 78 ntBASIC1.6□□□□□ -2.15
Ccdc9Q8VC31 Gm23761-201ENSMUST00000158347 104 ntBASIC1.6□□□□□ -2.15
Ccdc9Q8VC31 Gm22074-201ENSMUST00000158595 113 ntBASIC1.6□□□□□ -2.15
Ccdc9Q8VC31 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.6□□□□□ -2.15
Ccdc9Q8VC31 Gm42935-201ENSMUST00000202004 151 ntBASIC1.6□□□□□ -2.15
Ccdc9Q8VC31 Mir30c-2-201ENSMUST00000083633 84 ntBASIC1.6□□□□□ -2.15
Ccdc9Q8VC31 Gm25831-201ENSMUST00000158924 163 ntBASIC1.59□□□□□ -2.15
Ccdc9Q8VC31 Gm44462-201ENSMUST00000199696 129 ntBASIC1.59□□□□□ -2.15
Ccdc9Q8VC31 mt-Tc-201ENSMUST00000082400 66 ntBASIC1.59□□□□□ -2.15
Ccdc9Q8VC31 Gm24902-201ENSMUST00000158126 123 ntBASIC1.58□□□□□ -2.16
Ccdc9Q8VC31 Gm22089-201ENSMUST00000158336 102 ntBASIC1.58□□□□□ -2.16
Ccdc9Q8VC31 Gm20391-201ENSMUST00000174722 106 ntBASIC1.58□□□□□ -2.16
Ccdc9Q8VC31 Gm27639-201ENSMUST00000184937 85 ntBASIC1.58□□□□□ -2.16
Ccdc9Q8VC31 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.58□□□□□ -2.16
Ccdc9Q8VC31 mt-Tn-201ENSMUST00000082399 71 ntBASIC1.58□□□□□ -2.16
Ccdc9Q8VC31 Gm25611-201ENSMUST00000104017 133 ntBASIC1.57□□□□□ -2.16
Ccdc9Q8VC31 Gm22677-201ENSMUST00000116977 108 ntBASIC1.57□□□□□ -2.16
Ccdc9Q8VC31 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.57□□□□□ -2.16
Ccdc9Q8VC31 Gm22425-201ENSMUST00000158532 138 ntBASIC1.57□□□□□ -2.16
Ccdc9Q8VC31 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.57□□□□□ -2.16
Ccdc9Q8VC31 Gm26123-201ENSMUST00000083363 135 ntBASIC1.57□□□□□ -2.16
Ccdc9Q8VC31 Mir320-201ENSMUST00000083594 82 ntBASIC1.57□□□□□ -2.16
Ccdc9Q8VC31 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.56□□□□□ -2.16
Ccdc9Q8VC31 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Ccdc9Q8VC31 Gm23656-201ENSMUST00000122626 112 ntBASIC1.56□□□□□ -2.16
Ccdc9Q8VC31 Gm22815-201ENSMUST00000157451 62 ntBASIC1.56□□□□□ -2.16
Ccdc9Q8VC31 Gm24880-201ENSMUST00000158776 85 ntBASIC1.56□□□□□ -2.16
Ccdc9Q8VC31 Snora26-201ENSMUST00000175614 121 ntBASIC1.56□□□□□ -2.16
Ccdc9Q8VC31 Gm27326-201ENSMUST00000183504 95 ntBASIC1.56□□□□□ -2.16
Ccdc9Q8VC31 Gm25644-201ENSMUST00000083209 107 ntBASIC1.56□□□□□ -2.16
Ccdc9Q8VC31 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Ccdc9Q8VC31 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.55□□□□□ -2.16
Ccdc9Q8VC31 Gm24777-201ENSMUST00000157644 107 ntBASIC1.55□□□□□ -2.16
Ccdc9Q8VC31 Gm22522-201ENSMUST00000158271 151 ntBASIC1.55□□□□□ -2.16
Ccdc9Q8VC31 Gm25750-201ENSMUST00000175483 112 ntBASIC1.55□□□□□ -2.16
Ccdc9Q8VC31 Gm16399-201ENSMUST00000181423 219 ntBASIC1.55□□□□□ -2.16
Ccdc9Q8VC31 Gm27975-201ENSMUST00000184400 101 ntBASIC1.55□□□□□ -2.16
Ccdc9Q8VC31 Gm27686-201ENSMUST00000185123 91 ntBASIC1.55□□□□□ -2.16
Ccdc9Q8VC31 AC122335.1-201ENSMUST00000217587 175 ntBASIC1.55□□□□□ -2.16
Ccdc9Q8VC31 Gm23299-201ENSMUST00000082708 79 ntBASIC1.55□□□□□ -2.16
Ccdc9Q8VC31 Gm25696-201ENSMUST00000082900 105 ntBASIC1.55□□□□□ -2.16
Ccdc9Q8VC31 Gm15654-201ENSMUST00000152660 300 ntBASIC1.54□□□□□ -2.16
Ccdc9Q8VC31 Gm22485-201ENSMUST00000157990 109 ntBASIC1.54□□□□□ -2.16
Ccdc9Q8VC31 Gm26213-201ENSMUST00000158582 110 ntBASIC1.54□□□□□ -2.16
Ccdc9Q8VC31 Gm22140-201ENSMUST00000158745 120 ntBASIC1.54□□□□□ -2.16
Ccdc9Q8VC31 Gm16550-201ENSMUST00000162550 126 ntBASIC1.54□□□□□ -2.16
Ccdc9Q8VC31 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.54□□□□□ -2.16
Ccdc9Q8VC31 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.54□□□□□ -2.16
Ccdc9Q8VC31 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Ccdc9Q8VC31 Gm22673-201ENSMUST00000104415 131 ntBASIC1.53□□□□□ -2.16
Ccdc9Q8VC31 Gm25241-201ENSMUST00000174909 84 ntBASIC1.53□□□□□ -2.16
Ccdc9Q8VC31 Gm26217-201ENSMUST00000175212 84 ntBASIC1.53□□□□□ -2.16
Ccdc9Q8VC31 Gm23375-201ENSMUST00000175407 83 ntBASIC1.53□□□□□ -2.16
Ccdc9Q8VC31 Gm27987-201ENSMUST00000184023 93 ntBASIC1.53□□□□□ -2.16
Ccdc9Q8VC31 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC1.53□□□□□ -2.16
Ccdc9Q8VC31 Gm25899-201ENSMUST00000082672 141 ntBASIC1.53□□□□□ -2.16
Ccdc9Q8VC31 Gm25635-201ENSMUST00000082675 131 ntBASIC1.53□□□□□ -2.16
Ccdc9Q8VC31 Mir5117-201ENSMUST00000083226 84 ntBASIC1.53□□□□□ -2.16
Ccdc9Q8VC31 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Ccdc9Q8VC31 Gm25542-201ENSMUST00000116889 94 ntBASIC1.52□□□□□ -2.17
Ccdc9Q8VC31 Gm11333-201ENSMUST00000119479 148 ntBASIC1.52□□□□□ -2.17
Ccdc9Q8VC31 Gm23996-201ENSMUST00000158062 131 ntBASIC1.52□□□□□ -2.17
Ccdc9Q8VC31 Gm25044-201ENSMUST00000158603 104 ntBASIC1.52□□□□□ -2.17
Ccdc9Q8VC31 Gm16307-201ENSMUST00000161269 210 ntBASIC1.52□□□□□ -2.17
Ccdc9Q8VC31 Gm24575-201ENSMUST00000175502 77 ntBASIC1.52□□□□□ -2.17
Ccdc9Q8VC31 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.52□□□□□ -2.17
Ccdc9Q8VC31 Mir30f-201ENSMUST00000196073 92 ntBASIC1.52□□□□□ -2.17
Ccdc9Q8VC31 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Ccdc9Q8VC31 Gm22980-201ENSMUST00000082608 70 ntBASIC1.52□□□□□ -2.17
Ccdc9Q8VC31 Gm25854-201ENSMUST00000082792 72 ntBASIC1.52□□□□□ -2.17
Ccdc9Q8VC31 Gm23344-201ENSMUST00000083818 68 ntBASIC1.52□□□□□ -2.17
Ccdc9Q8VC31 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Ccdc9Q8VC31 Gm24064-201ENSMUST00000157486 106 ntBASIC1.51□□□□□ -2.17
Ccdc9Q8VC31 Gm25011-201ENSMUST00000158398 126 ntBASIC1.51□□□□□ -2.17
Ccdc9Q8VC31 Gm26290-201ENSMUST00000158891 145 ntBASIC1.51□□□□□ -2.17
Ccdc9Q8VC31 Gm25354-201ENSMUST00000179110 105 ntBASIC1.51□□□□□ -2.17
Ccdc9Q8VC31 Gm25740-201ENSMUST00000180247 107 ntBASIC1.51□□□□□ -2.17
Ccdc9Q8VC31 Mir7091-201ENSMUST00000184075 79 ntBASIC1.51□□□□□ -2.17
Ccdc9Q8VC31 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.51□□□□□ -2.17
Ccdc9Q8VC31 mt-Tl2-201ENSMUST00000082417 71 ntBASIC1.51□□□□□ -2.17
Ccdc9Q8VC31 Snord96a-201ENSMUST00000082791 81 ntBASIC1.51□□□□□ -2.17
Ccdc9Q8VC31 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.5□□□□□ -2.17
Ccdc9Q8VC31 Gm24183-201ENSMUST00000122572 93 ntBASIC1.5□□□□□ -2.17
Ccdc9Q8VC31 Gm23826-201ENSMUST00000157394 119 ntBASIC1.5□□□□□ -2.17
Ccdc9Q8VC31 Gm25958-201ENSMUST00000175114 71 ntBASIC1.5□□□□□ -2.17
Ccdc9Q8VC31 Gm26398-201ENSMUST00000179015 127 ntBASIC1.5□□□□□ -2.17
Ccdc9Q8VC31 Gm22884-201ENSMUST00000083127 140 ntBASIC1.5□□□□□ -2.17
Ccdc9Q8VC31 Gm23347-201ENSMUST00000083823 82 ntBASIC1.5□□□□□ -2.17
Ccdc9Q8VC31 Gm24162-201ENSMUST00000093665 102 ntBASIC1.5□□□□□ -2.17
Ccdc9Q8VC31 Gm23203-201ENSMUST00000104374 107 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms