Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Mir7017-201ENSMUST00000184894 62 ntBASIC2.42□□□□□ -2.02
Trim47Q8C0E3 Gm37824-201ENSMUST00000193430 3236 ntBASIC2.42□□□□□ -2.02
Trim47Q8C0E3 Gm5581-201ENSMUST00000072940 2550 ntBASIC2.41□□□□□ -2.02
Trim47Q8C0E3 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.41□□□□□ -2.02
Trim47Q8C0E3 Gm22947-201ENSMUST00000158559 91 ntBASIC2.41□□□□□ -2.02
Trim47Q8C0E3 Gm25300-201ENSMUST00000175284 84 ntBASIC2.41□□□□□ -2.02
Trim47Q8C0E3 Gm24366-201ENSMUST00000175383 86 ntBASIC2.41□□□□□ -2.02
Trim47Q8C0E3 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.41□□□□□ -2.02
Trim47Q8C0E3 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Trim47Q8C0E3 Mup-ps5-201ENSMUST00000118667 99 ntBASIC2.4□□□□□ -2.03
Trim47Q8C0E3 Gm26257-201ENSMUST00000122500 107 ntBASIC2.4□□□□□ -2.03
Trim47Q8C0E3 Gm22944-201ENSMUST00000158662 133 ntBASIC2.4□□□□□ -2.03
Trim47Q8C0E3 Gm24177-201ENSMUST00000158927 131 ntBASIC2.4□□□□□ -2.03
Trim47Q8C0E3 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.4□□□□□ -2.03
Trim47Q8C0E3 Gm43512-201ENSMUST00000198495 176 ntBASIC2.4□□□□□ -2.03
Trim47Q8C0E3 AC157278.1-201ENSMUST00000221621 148 ntBASIC2.4□□□□□ -2.03
Trim47Q8C0E3 Gm24201-201ENSMUST00000082946 125 ntBASIC2.4□□□□□ -2.03
Trim47Q8C0E3 Mir300-201ENSMUST00000083485 79 ntBASIC2.4□□□□□ -2.03
Trim47Q8C0E3 Gm25756-201ENSMUST00000103990 136 ntBASIC2.39□□□□□ -2.03
Trim47Q8C0E3 Gm25094-201ENSMUST00000103992 131 ntBASIC2.39□□□□□ -2.03
Trim47Q8C0E3 Gm22093-201ENSMUST00000158980 111 ntBASIC2.39□□□□□ -2.03
Trim47Q8C0E3 Mir7241-201ENSMUST00000184532 64 ntBASIC2.39□□□□□ -2.03
Trim47Q8C0E3 Mir1899-201ENSMUST00000122798 96 ntBASIC2.38□□□□□ -2.03
Trim47Q8C0E3 Gm26359-201ENSMUST00000158873 101 ntBASIC2.38□□□□□ -2.03
Trim47Q8C0E3 Mir3086-201ENSMUST00000175072 87 ntBASIC2.38□□□□□ -2.03
Trim47Q8C0E3 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC2.38□□□□□ -2.03
Trim47Q8C0E3 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
Trim47Q8C0E3 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Trim47Q8C0E3 Gm25991-201ENSMUST00000102439 99 ntBASIC2.37□□□□□ -2.03
Trim47Q8C0E3 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Trim47Q8C0E3 Gm23208-201ENSMUST00000158666 127 ntBASIC2.37□□□□□ -2.03
Trim47Q8C0E3 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC2.37□□□□□ -2.03
Trim47Q8C0E3 Mir494-201ENSMUST00000093632 85 ntBASIC2.37□□□□□ -2.03
Trim47Q8C0E3 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Trim47Q8C0E3 Gm22544-201ENSMUST00000104349 127 ntBASIC2.36□□□□□ -2.03
Trim47Q8C0E3 Gm23170-201ENSMUST00000157158 106 ntBASIC2.36□□□□□ -2.03
Trim47Q8C0E3 Gm25113-201ENSMUST00000157185 143 ntBASIC2.36□□□□□ -2.03
Trim47Q8C0E3 Gm24237-201ENSMUST00000157790 132 ntBASIC2.36□□□□□ -2.03
Trim47Q8C0E3 Gm22914-201ENSMUST00000175195 77 ntBASIC2.36□□□□□ -2.03
Trim47Q8C0E3 Mir3069-201ENSMUST00000198802 65 ntBASIC2.36□□□□□ -2.03
Trim47Q8C0E3 Gm43927-201ENSMUST00000204599 117 ntBASIC2.36□□□□□ -2.03
Trim47Q8C0E3 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trim47Q8C0E3 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
Trim47Q8C0E3 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC2.35□□□□□ -2.03
Trim47Q8C0E3 Gm25056-201ENSMUST00000157372 62 ntBASIC2.35□□□□□ -2.03
Trim47Q8C0E3 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.35□□□□□ -2.03
Trim47Q8C0E3 Gm25636-201ENSMUST00000082666 133 ntBASIC2.35□□□□□ -2.03
Trim47Q8C0E3 Mir222-201ENSMUST00000083537 79 ntBASIC2.35□□□□□ -2.03
Trim47Q8C0E3 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Trim47Q8C0E3 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Trim47Q8C0E3 AC164629.4-201ENSMUST00000218505 3247 ntBASIC2.34□□□□□ -2.03
Trim47Q8C0E3 Gm12469-201ENSMUST00000117623 207 ntBASIC2.34□□□□□ -2.03
Trim47Q8C0E3 Gm11857-201ENSMUST00000119817 324 ntBASIC2.34□□□□□ -2.03
Trim47Q8C0E3 Gm23661-201ENSMUST00000122630 87 ntBASIC2.34□□□□□ -2.03
Trim47Q8C0E3 Gm22083-201ENSMUST00000157586 102 ntBASIC2.34□□□□□ -2.03
Trim47Q8C0E3 Gm24401-201ENSMUST00000157868 91 ntBASIC2.34□□□□□ -2.03
Trim47Q8C0E3 Gm26029-201ENSMUST00000158659 132 ntBASIC2.34□□□□□ -2.03
Trim47Q8C0E3 Gm27722-201ENSMUST00000183908 76 ntBASIC2.34□□□□□ -2.03
Trim47Q8C0E3 Gm27979-201ENSMUST00000185126 56 ntBASIC2.34□□□□□ -2.03
Trim47Q8C0E3 Mir7232-201ENSMUST00000197929 74 ntBASIC2.34□□□□□ -2.03
Trim47Q8C0E3 Snord45b-201ENSMUST00000082797 71 ntBASIC2.34□□□□□ -2.03
Trim47Q8C0E3 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.34□□□□□ -2.04
Trim47Q8C0E3 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Trim47Q8C0E3 Gm27450-201ENSMUST00000104632 90 ntBASIC2.33□□□□□ -2.04
Trim47Q8C0E3 Gm24900-201ENSMUST00000158128 134 ntBASIC2.33□□□□□ -2.04
Trim47Q8C0E3 Gm38295-201ENSMUST00000191951 151 ntBASIC2.33□□□□□ -2.04
Trim47Q8C0E3 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Trim47Q8C0E3 Mir297-1-201ENSMUST00000103800 76 ntBASIC2.32□□□□□ -2.04
Trim47Q8C0E3 Gm23010-201ENSMUST00000104151 126 ntBASIC2.32□□□□□ -2.04
Trim47Q8C0E3 Gm6444-201ENSMUST00000119611 458 ntBASIC2.32□□□□□ -2.04
Trim47Q8C0E3 Snord60-201ENSMUST00000082834 78 ntBASIC2.32□□□□□ -2.04
Trim47Q8C0E3 Gm22753-201ENSMUST00000083657 107 ntBASIC2.32□□□□□ -2.04
Trim47Q8C0E3 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Trim47Q8C0E3 Gm16510-201ENSMUST00000153501 249 ntBASIC2.31□□□□□ -2.04
Trim47Q8C0E3 Gm24009-201ENSMUST00000157734 93 ntBASIC2.31□□□□□ -2.04
Trim47Q8C0E3 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC2.31□□□□□ -2.04
Trim47Q8C0E3 Mir5104-201ENSMUST00000175319 94 ntBASIC2.31□□□□□ -2.04
Trim47Q8C0E3 Mir8116-201ENSMUST00000184134 97 ntBASIC2.31□□□□□ -2.04
Trim47Q8C0E3 Snord43-201ENSMUST00000199549 108 ntBASIC2.31□□□□□ -2.04
Trim47Q8C0E3 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.3□□□□□ -2.04
Trim47Q8C0E3 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.3□□□□□ -2.04
Trim47Q8C0E3 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trim47Q8C0E3 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.29□□□□□ -2.04
Trim47Q8C0E3 Gm23881-201ENSMUST00000116872 66 ntBASIC2.29□□□□□ -2.04
Trim47Q8C0E3 Mir7225-201ENSMUST00000184178 54 ntBASIC2.29□□□□□ -2.04
Trim47Q8C0E3 Gm27443-201ENSMUST00000184660 98 ntBASIC2.29□□□□□ -2.04
Trim47Q8C0E3 Gm25796-201ENSMUST00000082645 163 ntBASIC2.29□□□□□ -2.04
Trim47Q8C0E3 Mir151-201ENSMUST00000083678 68 ntBASIC2.29□□□□□ -2.04
Trim47Q8C0E3 Gm22039-201ENSMUST00000157278 132 ntBASIC2.28□□□□□ -2.04
Trim47Q8C0E3 Gm25183-201ENSMUST00000157752 106 ntBASIC2.28□□□□□ -2.04
Trim47Q8C0E3 Mir3057-201ENSMUST00000175040 91 ntBASIC2.28□□□□□ -2.04
Trim47Q8C0E3 Gm27297-201ENSMUST00000183395 105 ntBASIC2.28□□□□□ -2.04
Trim47Q8C0E3 Gm24202-201ENSMUST00000082948 103 ntBASIC2.28□□□□□ -2.04
Trim47Q8C0E3 Snora69-201ENSMUST00000083708 131 ntBASIC2.28□□□□□ -2.04
Trim47Q8C0E3 Mir741-201ENSMUST00000103931 71 ntBASIC2.27□□□□□ -2.05
Trim47Q8C0E3 Gm24728-201ENSMUST00000158226 125 ntBASIC2.27□□□□□ -2.05
Trim47Q8C0E3 Gm23289-201ENSMUST00000175615 108 ntBASIC2.27□□□□□ -2.05
Trim47Q8C0E3 Gm22802-201ENSMUST00000175621 89 ntBASIC2.27□□□□□ -2.05
Trim47Q8C0E3 Gm23649-201ENSMUST00000179007 107 ntBASIC2.27□□□□□ -2.05
Trim47Q8C0E3 Mir6901-201ENSMUST00000185062 62 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 266.6 ms