Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm22666-201ENSMUST00000158717 164 ntBASIC3.05□□□□□ -1.92
Trim35Q8C006 Gm26297-201ENSMUST00000179464 132 ntBASIC3.05□□□□□ -1.92
Trim35Q8C006 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Trim35Q8C006 Gm24049-201ENSMUST00000102409 100 ntBASIC3.04□□□□□ -1.92
Trim35Q8C006 Mir3061-201ENSMUST00000175129 91 ntBASIC3.04□□□□□ -1.92
Trim35Q8C006 Gm24082-201ENSMUST00000175175 83 ntBASIC3.04□□□□□ -1.92
Trim35Q8C006 Gm44488-201ENSMUST00000199467 119 ntBASIC3.04□□□□□ -1.92
Trim35Q8C006 Gm22809-201ENSMUST00000082743 156 ntBASIC3.04□□□□□ -1.92
Trim35Q8C006 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Trim35Q8C006 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Trim35Q8C006 Gm22023-201ENSMUST00000104354 130 ntBASIC3.03□□□□□ -1.92
Trim35Q8C006 Gm24138-201ENSMUST00000157572 114 ntBASIC3.03□□□□□ -1.92
Trim35Q8C006 Gm17117-201ENSMUST00000163665 299 ntBASIC3.03□□□□□ -1.92
Trim35Q8C006 Gm22357-201ENSMUST00000082882 83 ntBASIC3.03□□□□□ -1.92
Trim35Q8C006 Mir128-1-201ENSMUST00000083586 70 ntBASIC3.03□□□□□ -1.92
Trim35Q8C006 Gm26061-201ENSMUST00000175584 108 ntBASIC3.02□□□□□ -1.93
Trim35Q8C006 Mir8096-201ENSMUST00000184526 127 ntBASIC3.02□□□□□ -1.93
Trim35Q8C006 Gm37807-201ENSMUST00000194310 190 ntBASIC3.02□□□□□ -1.93
Trim35Q8C006 Gm25820-202ENSMUST00000197479 128 ntBASIC3.02□□□□□ -1.93
Trim35Q8C006 Gm25788-201ENSMUST00000082721 131 ntBASIC3.02□□□□□ -1.93
Trim35Q8C006 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Trim35Q8C006 Gm25309-201ENSMUST00000116728 126 ntBASIC3.01□□□□□ -1.93
Trim35Q8C006 Gm11253-201ENSMUST00000118486 201 ntBASIC3.01□□□□□ -1.93
Trim35Q8C006 Gm14389-201ENSMUST00000140453 241 ntBASIC3.01□□□□□ -1.93
Trim35Q8C006 Gm27979-201ENSMUST00000185126 56 ntBASIC3.01□□□□□ -1.93
Trim35Q8C006 Gm44600-201ENSMUST00000208540 111 ntBASIC3.01□□□□□ -1.93
Trim35Q8C006 AC174457.1-201ENSMUST00000215932 226 ntBASIC3.01□□□□□ -1.93
Trim35Q8C006 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3□□□□□ -1.93
Trim35Q8C006 Gm22786-201ENSMUST00000104086 122 ntBASIC3□□□□□ -1.93
Trim35Q8C006 Gm23787-201ENSMUST00000122538 73 ntBASIC3□□□□□ -1.93
Trim35Q8C006 Gm26099-201ENSMUST00000157248 109 ntBASIC3□□□□□ -1.93
Trim35Q8C006 Gm22541-201ENSMUST00000158165 127 ntBASIC3□□□□□ -1.93
Trim35Q8C006 Gm23380-201ENSMUST00000158448 103 ntBASIC3□□□□□ -1.93
Trim35Q8C006 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Trim35Q8C006 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Trim35Q8C006 Gm26338-201ENSMUST00000102372 110 ntBASIC2.99□□□□□ -1.93
Trim35Q8C006 Gm24627-201ENSMUST00000122764 138 ntBASIC2.99□□□□□ -1.93
Trim35Q8C006 Gm26277-201ENSMUST00000157097 152 ntBASIC2.99□□□□□ -1.93
Trim35Q8C006 Gm20473-201ENSMUST00000173064 112 ntBASIC2.99□□□□□ -1.93
Trim35Q8C006 Gm22802-201ENSMUST00000175621 89 ntBASIC2.99□□□□□ -1.93
Trim35Q8C006 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
Trim35Q8C006 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Trim35Q8C006 Gm25110-201ENSMUST00000116684 121 ntBASIC2.98□□□□□ -1.93
Trim35Q8C006 Gm25775-201ENSMUST00000116716 121 ntBASIC2.98□□□□□ -1.93
Trim35Q8C006 Gm24795-201ENSMUST00000116737 121 ntBASIC2.98□□□□□ -1.93
Trim35Q8C006 Gm23551-201ENSMUST00000116852 121 ntBASIC2.98□□□□□ -1.93
Trim35Q8C006 Gm25171-201ENSMUST00000116926 121 ntBASIC2.98□□□□□ -1.93
Trim35Q8C006 Gm22322-201ENSMUST00000157151 111 ntBASIC2.98□□□□□ -1.93
Trim35Q8C006 Gm22801-201ENSMUST00000175624 84 ntBASIC2.98□□□□□ -1.93
Trim35Q8C006 Gm22862-201ENSMUST00000178593 121 ntBASIC2.98□□□□□ -1.93
Trim35Q8C006 AC147560.1-201ENSMUST00000197528 107 ntBASIC2.98□□□□□ -1.93
Trim35Q8C006 Gm23615-201ENSMUST00000082602 65 ntBASIC2.98□□□□□ -1.93
Trim35Q8C006 Gm23377-201ENSMUST00000082943 126 ntBASIC2.98□□□□□ -1.93
Trim35Q8C006 Gm25526-201ENSMUST00000104332 132 ntBASIC2.97□□□□□ -1.93
Trim35Q8C006 Mir7014-201ENSMUST00000183853 63 ntBASIC2.97□□□□□ -1.93
Trim35Q8C006 Mir6993-201ENSMUST00000184912 65 ntBASIC2.97□□□□□ -1.93
Trim35Q8C006 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.97□□□□□ -1.93
Trim35Q8C006 Gm22879-201ENSMUST00000082895 74 ntBASIC2.97□□□□□ -1.93
Trim35Q8C006 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
Trim35Q8C006 Gm24787-201ENSMUST00000157380 123 ntBASIC2.96□□□□□ -1.94
Trim35Q8C006 Gm24229-201ENSMUST00000158830 118 ntBASIC2.96□□□□□ -1.94
Trim35Q8C006 AC144783.2-201ENSMUST00000219089 195 ntBASIC2.96□□□□□ -1.94
Trim35Q8C006 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.96□□□□□ -1.94
Trim35Q8C006 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Trim35Q8C006 Gm22782-201ENSMUST00000104082 132 ntBASIC2.95□□□□□ -1.94
Trim35Q8C006 Gm25376-201ENSMUST00000104340 133 ntBASIC2.95□□□□□ -1.94
Trim35Q8C006 Gm25539-201ENSMUST00000116886 122 ntBASIC2.95□□□□□ -1.94
Trim35Q8C006 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Trim35Q8C006 Gm25779-201ENSMUST00000116710 95 ntBASIC2.94□□□□□ -1.94
Trim35Q8C006 Scarna3a-201ENSMUST00000158911 140 ntBASIC2.94□□□□□ -1.94
Trim35Q8C006 Mir7683-201ENSMUST00000183842 61 ntBASIC2.94□□□□□ -1.94
Trim35Q8C006 Gm38274-201ENSMUST00000195689 148 ntBASIC2.94□□□□□ -1.94
Trim35Q8C006 Gm26438-201ENSMUST00000082593 107 ntBASIC2.94□□□□□ -1.94
Trim35Q8C006 Snord95-201ENSMUST00000082846 68 ntBASIC2.94□□□□□ -1.94
Trim35Q8C006 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.93□□□□□ -1.94
Trim35Q8C006 Gm11598-201ENSMUST00000119257 357 ntBASIC2.93□□□□□ -1.94
Trim35Q8C006 Gm25476-201ENSMUST00000175125 185 ntBASIC2.93□□□□□ -1.94
Trim35Q8C006 Gm25470-201ENSMUST00000175576 111 ntBASIC2.93□□□□□ -1.94
Trim35Q8C006 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Trim35Q8C006 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Trim35Q8C006 Gm44948-201ENSMUST00000209050 149 ntBASIC2.92□□□□□ -1.94
Trim35Q8C006 Mir181b-1-201ENSMUST00000083524 80 ntBASIC2.92□□□□□ -1.94
Trim35Q8C006 Gm23012-201ENSMUST00000104149 83 ntBASIC2.91□□□□□ -1.94
Trim35Q8C006 Gm23128-201ENSMUST00000104257 132 ntBASIC2.91□□□□□ -1.94
Trim35Q8C006 Gm25500-201ENSMUST00000104426 123 ntBASIC2.91□□□□□ -1.94
Trim35Q8C006 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Trim35Q8C006 Gm23128-202ENSMUST00000196578 133 ntBASIC2.91□□□□□ -1.94
Trim35Q8C006 Mir878-201ENSMUST00000104680 78 ntBASIC2.9□□□□□ -1.95
Trim35Q8C006 Gm23668-201ENSMUST00000157465 111 ntBASIC2.9□□□□□ -1.95
Trim35Q8C006 Gm22165-201ENSMUST00000158414 103 ntBASIC2.9□□□□□ -1.95
Trim35Q8C006 Mir7k-201ENSMUST00000184115 110 ntBASIC2.9□□□□□ -1.95
Trim35Q8C006 Snord43-201ENSMUST00000199549 108 ntBASIC2.9□□□□□ -1.95
Trim35Q8C006 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.9□□□□□ -1.95
Trim35Q8C006 AC113441.1-201ENSMUST00000223464 134 ntBASIC2.9□□□□□ -1.95
Trim35Q8C006 Gm23301-201ENSMUST00000082713 65 ntBASIC2.9□□□□□ -1.95
Trim35Q8C006 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Trim35Q8C006 Gm25040-201ENSMUST00000103877 66 ntBASIC2.89□□□□□ -1.95
Trim35Q8C006 Gm14533-201ENSMUST00000117088 93 ntBASIC2.89□□□□□ -1.95
Trim35Q8C006 Mir3057-201ENSMUST00000175040 91 ntBASIC2.89□□□□□ -1.95
Trim35Q8C006 Mir5123-201ENSMUST00000177794 83 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 147.6 ms