Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm25836-201ENSMUST00000158918 123 ntBASIC1.72□□□□□ -2.13
Ubp1Q811S7 Gm23339-201ENSMUST00000158962 139 ntBASIC1.72□□□□□ -2.13
Ubp1Q811S7 Mir6352-201ENSMUST00000184495 116 ntBASIC1.72□□□□□ -2.13
Ubp1Q811S7 Gm36956-201ENSMUST00000193830 214 ntBASIC1.72□□□□□ -2.13
Ubp1Q811S7 Gm45654-201ENSMUST00000210980 123 ntBASIC1.72□□□□□ -2.13
Ubp1Q811S7 Gm23790-201ENSMUST00000083013 107 ntBASIC1.72□□□□□ -2.13
Ubp1Q811S7 Gm23349-201ENSMUST00000158432 98 ntBASIC1.71□□□□□ -2.14
Ubp1Q811S7 Gm10548-202ENSMUST00000165672 272 ntBASIC1.71□□□□□ -2.14
Ubp1Q811S7 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
Ubp1Q811S7 Gm23010-201ENSMUST00000104151 126 ntBASIC1.7□□□□□ -2.14
Ubp1Q811S7 Gm22770-201ENSMUST00000158368 67 ntBASIC1.7□□□□□ -2.14
Ubp1Q811S7 Mir1933-201ENSMUST00000158930 88 ntBASIC1.7□□□□□ -2.14
Ubp1Q811S7 Gm22129-201ENSMUST00000179034 107 ntBASIC1.7□□□□□ -2.14
Ubp1Q811S7 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC1.7□□□□□ -2.14
Ubp1Q811S7 mt-Tn-201ENSMUST00000082399 71 ntBASIC1.7□□□□□ -2.14
Ubp1Q811S7 Gm24165-201ENSMUST00000082718 128 ntBASIC1.7□□□□□ -2.14
Ubp1Q811S7 Gm22950-201ENSMUST00000082776 107 ntBASIC1.7□□□□□ -2.14
Ubp1Q811S7 Gm24527-201ENSMUST00000082920 107 ntBASIC1.7□□□□□ -2.14
Ubp1Q811S7 Gm25128-201ENSMUST00000083339 76 ntBASIC1.7□□□□□ -2.14
Ubp1Q811S7 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Ubp1Q811S7 Gm24476-201ENSMUST00000157437 131 ntBASIC1.69□□□□□ -2.14
Ubp1Q811S7 Gm24394-201ENSMUST00000158141 123 ntBASIC1.69□□□□□ -2.14
Ubp1Q811S7 Gm24129-201ENSMUST00000158537 97 ntBASIC1.69□□□□□ -2.14
Ubp1Q811S7 Gm26379-202ENSMUST00000200225 132 ntBASIC1.69□□□□□ -2.14
Ubp1Q811S7 Gm23369-201ENSMUST00000175406 105 ntBASIC1.68□□□□□ -2.14
Ubp1Q811S7 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
Ubp1Q811S7 Gm11694-201ENSMUST00000118637 159 ntBASIC1.67□□□□□ -2.14
Ubp1Q811S7 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Ubp1Q811S7 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Ubp1Q811S7 Mir30a-201ENSMUST00000083471 71 ntBASIC1.67□□□□□ -2.14
Ubp1Q811S7 Gm22753-201ENSMUST00000083657 107 ntBASIC1.67□□□□□ -2.14
Ubp1Q811S7 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Ubp1Q811S7 Gm22386-201ENSMUST00000158192 129 ntBASIC1.66□□□□□ -2.14
Ubp1Q811S7 Gm27419-201ENSMUST00000184576 109 ntBASIC1.66□□□□□ -2.14
Ubp1Q811S7 CT571266.1-201ENSMUST00000222859 153 ntBASIC1.66□□□□□ -2.14
Ubp1Q811S7 Gm23301-201ENSMUST00000082713 65 ntBASIC1.66□□□□□ -2.14
Ubp1Q811S7 Gm22672-201ENSMUST00000104414 134 ntBASIC1.65□□□□□ -2.15
Ubp1Q811S7 Gm22515-201ENSMUST00000158273 305 ntBASIC1.65□□□□□ -2.15
Ubp1Q811S7 Gm25449-201ENSMUST00000179389 79 ntBASIC1.65□□□□□ -2.15
Ubp1Q811S7 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.65□□□□□ -2.15
Ubp1Q811S7 Gm25899-201ENSMUST00000082672 141 ntBASIC1.65□□□□□ -2.15
Ubp1Q811S7 Gm25851-201ENSMUST00000082794 107 ntBASIC1.65□□□□□ -2.15
Ubp1Q811S7 Gm22723-201ENSMUST00000083820 129 ntBASIC1.65□□□□□ -2.15
Ubp1Q811S7 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Ubp1Q811S7 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Ubp1Q811S7 Gm22233-201ENSMUST00000157464 114 ntBASIC1.64□□□□□ -2.15
Ubp1Q811S7 Gm22729-201ENSMUST00000158088 129 ntBASIC1.64□□□□□ -2.15
Ubp1Q811S7 Gm25868-201ENSMUST00000158253 114 ntBASIC1.64□□□□□ -2.15
Ubp1Q811S7 Gm23261-201ENSMUST00000158316 136 ntBASIC1.64□□□□□ -2.15
Ubp1Q811S7 Gm23857-201ENSMUST00000158379 111 ntBASIC1.64□□□□□ -2.15
Ubp1Q811S7 Gm26158-201ENSMUST00000158973 119 ntBASIC1.64□□□□□ -2.15
Ubp1Q811S7 Gm22466-201ENSMUST00000175278 69 ntBASIC1.64□□□□□ -2.15
Ubp1Q811S7 Gm23289-201ENSMUST00000175615 108 ntBASIC1.64□□□□□ -2.15
Ubp1Q811S7 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.64□□□□□ -2.15
Ubp1Q811S7 Gm44408-201ENSMUST00000200205 66 ntBASIC1.64□□□□□ -2.15
Ubp1Q811S7 Gm26202-201ENSMUST00000082910 65 ntBASIC1.64□□□□□ -2.15
Ubp1Q811S7 Gm22761-201ENSMUST00000102278 96 ntBASIC1.63□□□□□ -2.15
Ubp1Q811S7 Gm26104-201ENSMUST00000157250 108 ntBASIC1.63□□□□□ -2.15
Ubp1Q811S7 Gm24399-201ENSMUST00000157869 74 ntBASIC1.63□□□□□ -2.15
Ubp1Q811S7 Gm37579-201ENSMUST00000194291 142 ntBASIC1.63□□□□□ -2.15
Ubp1Q811S7 Gm44488-201ENSMUST00000199467 119 ntBASIC1.63□□□□□ -2.15
Ubp1Q811S7 Gm26922-201ENSMUST00000082687 72 ntBASIC1.63□□□□□ -2.15
Ubp1Q811S7 Gm27297-201ENSMUST00000183395 105 ntBASIC1.62□□□□□ -2.15
Ubp1Q811S7 Gm38323-201ENSMUST00000192450 210 ntBASIC1.62□□□□□ -2.15
Ubp1Q811S7 Gm44602-201ENSMUST00000205948 132 ntBASIC1.62□□□□□ -2.15
Ubp1Q811S7 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.61□□□□□ -2.15
Ubp1Q811S7 Gm26089-201ENSMUST00000157898 107 ntBASIC1.61□□□□□ -2.15
Ubp1Q811S7 Gm28383-201ENSMUST00000187563 139 ntBASIC1.61□□□□□ -2.15
Ubp1Q811S7 Gm45197-201ENSMUST00000205288 151 ntBASIC1.61□□□□□ -2.15
Ubp1Q811S7 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.61□□□□□ -2.15
Ubp1Q811S7 Gm24311-201ENSMUST00000082570 104 ntBASIC1.61□□□□□ -2.15
Ubp1Q811S7 Gm25600-201ENSMUST00000158357 106 ntBASIC1.6□□□□□ -2.15
Ubp1Q811S7 Mir6237-201ENSMUST00000183808 91 ntBASIC1.6□□□□□ -2.15
Ubp1Q811S7 Mir6905-201ENSMUST00000184228 70 ntBASIC1.6□□□□□ -2.15
Ubp1Q811S7 Gm24406-201ENSMUST00000083026 128 ntBASIC1.6□□□□□ -2.15
Ubp1Q811S7 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.59□□□□□ -2.15
Ubp1Q811S7 Gm23482-201ENSMUST00000104172 122 ntBASIC1.59□□□□□ -2.15
Ubp1Q811S7 Gm26181-201ENSMUST00000157687 106 ntBASIC1.59□□□□□ -2.15
Ubp1Q811S7 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.59□□□□□ -2.15
Ubp1Q811S7 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.59□□□□□ -2.15
Ubp1Q811S7 Gm26080-201ENSMUST00000104069 131 ntBASIC1.58□□□□□ -2.16
Ubp1Q811S7 Gm24549-201ENSMUST00000158647 139 ntBASIC1.58□□□□□ -2.16
Ubp1Q811S7 Gm27493-201ENSMUST00000184128 78 ntBASIC1.58□□□□□ -2.16
Ubp1Q811S7 Gm18433-201ENSMUST00000192747 197 ntBASIC1.58□□□□□ -2.16
Ubp1Q811S7 AC122327.1-201ENSMUST00000220778 108 ntBASIC1.58□□□□□ -2.16
Ubp1Q811S7 Mir148b-201ENSMUST00000083626 97 ntBASIC1.58□□□□□ -2.16
Ubp1Q811S7 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Ubp1Q811S7 Gm25495-201ENSMUST00000104431 131 ntBASIC1.57□□□□□ -2.16
Ubp1Q811S7 Gm25166-201ENSMUST00000158909 111 ntBASIC1.57□□□□□ -2.16
Ubp1Q811S7 Gm25693-201ENSMUST00000175443 85 ntBASIC1.57□□□□□ -2.16
Ubp1Q811S7 Gm22544-201ENSMUST00000104349 127 ntBASIC1.56□□□□□ -2.16
Ubp1Q811S7 Gm23652-201ENSMUST00000116752 107 ntBASIC1.56□□□□□ -2.16
Ubp1Q811S7 Gm24648-201ENSMUST00000157111 132 ntBASIC1.56□□□□□ -2.16
Ubp1Q811S7 Gm24290-201ENSMUST00000157634 96 ntBASIC1.56□□□□□ -2.16
Ubp1Q811S7 Gm24009-201ENSMUST00000157734 93 ntBASIC1.56□□□□□ -2.16
Ubp1Q811S7 Gm22541-201ENSMUST00000158165 127 ntBASIC1.56□□□□□ -2.16
Ubp1Q811S7 Gm23917-201ENSMUST00000175256 98 ntBASIC1.56□□□□□ -2.16
Ubp1Q811S7 Snord50a-201ENSMUST00000178154 72 ntBASIC1.56□□□□□ -2.16
Ubp1Q811S7 Gm24463-201ENSMUST00000178417 72 ntBASIC1.56□□□□□ -2.16
Ubp1Q811S7 Mir7225-201ENSMUST00000184178 54 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 164.7 ms