Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Gm24232-201ENSMUST00000104314 132 ntBASIC0.34□□□□□ -2.36
Hdac4Q6NZM9 Gm22105-201ENSMUST00000116734 116 ntBASIC0.34□□□□□ -2.36
Hdac4Q6NZM9 Gm23881-201ENSMUST00000116872 66 ntBASIC0.34□□□□□ -2.36
Hdac4Q6NZM9 Gm14626-201ENSMUST00000117619 216 ntBASIC0.34□□□□□ -2.36
Hdac4Q6NZM9 Gm26091-201ENSMUST00000122704 82 ntBASIC0.34□□□□□ -2.36
Hdac4Q6NZM9 Gm25885-201ENSMUST00000157779 109 ntBASIC0.34□□□□□ -2.36
Hdac4Q6NZM9 Gm22349-201ENSMUST00000157864 107 ntBASIC0.34□□□□□ -2.36
Hdac4Q6NZM9 Gm23036-201ENSMUST00000157885 99 ntBASIC0.34□□□□□ -2.36
Hdac4Q6NZM9 Gm22983-201ENSMUST00000158308 104 ntBASIC0.34□□□□□ -2.36
Hdac4Q6NZM9 Gm22911-201ENSMUST00000177920 107 ntBASIC0.34□□□□□ -2.36
Hdac4Q6NZM9 Mir6904-201ENSMUST00000183443 67 ntBASIC0.34□□□□□ -2.36
Hdac4Q6NZM9 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0.34□□□□□ -2.36
Hdac4Q6NZM9 Mir6896-201ENSMUST00000198033 73 ntBASIC0.34□□□□□ -2.36
Hdac4Q6NZM9 AC164561.1-201ENSMUST00000220414 115 ntBASIC0.34□□□□□ -2.36
Hdac4Q6NZM9 Gm25899-201ENSMUST00000082672 141 ntBASIC0.34□□□□□ -2.36
Hdac4Q6NZM9 Snord60-201ENSMUST00000082834 78 ntBASIC0.34□□□□□ -2.36
Hdac4Q6NZM9 Snord90-201ENSMUST00000104568 111 ntBASIC0.33□□□□□ -2.36
Hdac4Q6NZM9 Gm26152-201ENSMUST00000157427 101 ntBASIC0.33□□□□□ -2.36
Hdac4Q6NZM9 Gm23504-201ENSMUST00000158988 95 ntBASIC0.33□□□□□ -2.36
Hdac4Q6NZM9 Gm17528-201ENSMUST00000171026 239 ntBASIC0.33□□□□□ -2.36
Hdac4Q6NZM9 Mir100-201ENSMUST00000175270 80 ntBASIC0.33□□□□□ -2.36
Hdac4Q6NZM9 Gm27699-201ENSMUST00000183553 180 ntBASIC0.33□□□□□ -2.36
Hdac4Q6NZM9 Gm27928-201ENSMUST00000183747 256 ntBASIC0.33□□□□□ -2.36
Hdac4Q6NZM9 Gm27446-201ENSMUST00000183963 89 ntBASIC0.33□□□□□ -2.36
Hdac4Q6NZM9 AC124739.2-201ENSMUST00000222201 109 ntBASIC0.33□□□□□ -2.36
Hdac4Q6NZM9 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.33□□□□□ -2.36
Hdac4Q6NZM9 Gm24449-201ENSMUST00000083985 106 ntBASIC0.33□□□□□ -2.36
Hdac4Q6NZM9 Gm24793-201ENSMUST00000104289 132 ntBASIC0.32□□□□□ -2.36
Hdac4Q6NZM9 Gm26011-201ENSMUST00000104410 104 ntBASIC0.32□□□□□ -2.36
Hdac4Q6NZM9 Gm23988-201ENSMUST00000117034 122 ntBASIC0.32□□□□□ -2.36
Hdac4Q6NZM9 Gm24717-201ENSMUST00000157522 124 ntBASIC0.32□□□□□ -2.36
Hdac4Q6NZM9 Gm25071-201ENSMUST00000175232 70 ntBASIC0.32□□□□□ -2.36
Hdac4Q6NZM9 Trbv25-201ENSMUST00000194700 273 ntBASIC0.32□□□□□ -2.36
Hdac4Q6NZM9 Mir7657-201ENSMUST00000196051 57 ntBASIC0.32□□□□□ -2.36
Hdac4Q6NZM9 Gm44322-201ENSMUST00000196830 115 ntBASIC0.32□□□□□ -2.36
Hdac4Q6NZM9 Gm3702-201ENSMUST00000211754 346 ntBASIC0.32□□□□□ -2.36
Hdac4Q6NZM9 Gm23749-201ENSMUST00000104223 131 ntBASIC0.31□□□□□ -2.36
Hdac4Q6NZM9 Gm16186-201ENSMUST00000120132 216 ntBASIC0.31□□□□□ -2.36
Hdac4Q6NZM9 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.31□□□□□ -2.36
Hdac4Q6NZM9 Gm22706-201ENSMUST00000157907 112 ntBASIC0.31□□□□□ -2.36
Hdac4Q6NZM9 Gm23857-201ENSMUST00000158379 111 ntBASIC0.31□□□□□ -2.36
Hdac4Q6NZM9 Gm10548-202ENSMUST00000165672 272 ntBASIC0.31□□□□□ -2.36
Hdac4Q6NZM9 Gm23917-201ENSMUST00000175256 98 ntBASIC0.31□□□□□ -2.36
Hdac4Q6NZM9 Mir3089-201ENSMUST00000175350 84 ntBASIC0.31□□□□□ -2.36
Hdac4Q6NZM9 Mir669j-201ENSMUST00000179023 121 ntBASIC0.31□□□□□ -2.36
Hdac4Q6NZM9 Ighv15-1-201ENSMUST00000194450 276 ntBASIC0.31□□□□□ -2.36
Hdac4Q6NZM9 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.31□□□□□ -2.36
Hdac4Q6NZM9 Mir200a-201ENSMUST00000083466 90 ntBASIC0.31□□□□□ -2.36
Hdac4Q6NZM9 Mir20b-201ENSMUST00000102087 80 ntBASIC0.3□□□□□ -2.36
Hdac4Q6NZM9 Gm26290-201ENSMUST00000158891 145 ntBASIC0.3□□□□□ -2.36
Hdac4Q6NZM9 Mir6481-201ENSMUST00000184617 110 ntBASIC0.3□□□□□ -2.36
Hdac4Q6NZM9 Gm37545-201ENSMUST00000186512 148 ntBASIC0.3□□□□□ -2.36
Hdac4Q6NZM9 Gm44469-201ENSMUST00000198558 79 ntBASIC0.3□□□□□ -2.36
Hdac4Q6NZM9 Gm42935-201ENSMUST00000202004 151 ntBASIC0.3□□□□□ -2.36
Hdac4Q6NZM9 Gm45492-201ENSMUST00000211611 288 ntBASIC0.3□□□□□ -2.36
Hdac4Q6NZM9 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.3□□□□□ -2.36
Hdac4Q6NZM9 Mir710-201ENSMUST00000102088 110 ntBASIC0.29□□□□□ -2.36
Hdac4Q6NZM9 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.29□□□□□ -2.36
Hdac4Q6NZM9 Gm26158-201ENSMUST00000158973 119 ntBASIC0.29□□□□□ -2.36
Hdac4Q6NZM9 Gm27475-201ENSMUST00000183420 61 ntBASIC0.29□□□□□ -2.36
Hdac4Q6NZM9 Mir7065-201ENSMUST00000185110 61 ntBASIC0.29□□□□□ -2.36
Hdac4Q6NZM9 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
Hdac4Q6NZM9 Mir377-201ENSMUST00000083504 68 ntBASIC0.29□□□□□ -2.36
Hdac4Q6NZM9 Gm26168-201ENSMUST00000083787 112 ntBASIC0.29□□□□□ -2.36
Hdac4Q6NZM9 Mir1191-201ENSMUST00000116883 120 ntBASIC0.28□□□□□ -2.36
Hdac4Q6NZM9 n-R5s39-201ENSMUST00000122613 108 ntBASIC0.28□□□□□ -2.36
Hdac4Q6NZM9 Gm24141-201ENSMUST00000122776 115 ntBASIC0.28□□□□□ -2.36
Hdac4Q6NZM9 Gm22520-201ENSMUST00000158269 129 ntBASIC0.28□□□□□ -2.36
Hdac4Q6NZM9 Gm26398-201ENSMUST00000179015 127 ntBASIC0.28□□□□□ -2.36
Hdac4Q6NZM9 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.28□□□□□ -2.36
Hdac4Q6NZM9 Gm44470-201ENSMUST00000203913 142 ntBASIC0.28□□□□□ -2.36
Hdac4Q6NZM9 Gm44602-201ENSMUST00000205948 132 ntBASIC0.28□□□□□ -2.36
Hdac4Q6NZM9 Mir1a-1-201ENSMUST00000093635 77 ntBASIC0.28□□□□□ -2.36
Hdac4Q6NZM9 Gm24263-201ENSMUST00000104059 107 ntBASIC0.27□□□□□ -2.37
Hdac4Q6NZM9 Gm22772-201ENSMUST00000104451 121 ntBASIC0.27□□□□□ -2.37
Hdac4Q6NZM9 Gm25680-201ENSMUST00000116917 126 ntBASIC0.27□□□□□ -2.37
Hdac4Q6NZM9 Gm22635-201ENSMUST00000116962 126 ntBASIC0.27□□□□□ -2.37
Hdac4Q6NZM9 Gm23260-201ENSMUST00000158317 172 ntBASIC0.27□□□□□ -2.37
Hdac4Q6NZM9 Gm22239-201ENSMUST00000175220 103 ntBASIC0.27□□□□□ -2.37
Hdac4Q6NZM9 Gm8034-201ENSMUST00000178853 132 ntBASIC0.27□□□□□ -2.37
Hdac4Q6NZM9 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.27□□□□□ -2.37
Hdac4Q6NZM9 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.27□□□□□ -2.37
Hdac4Q6NZM9 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.27□□□□□ -2.37
Hdac4Q6NZM9 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.27□□□□□ -2.37
Hdac4Q6NZM9 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.27□□□□□ -2.37
Hdac4Q6NZM9 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.27□□□□□ -2.37
Hdac4Q6NZM9 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.27□□□□□ -2.37
Hdac4Q6NZM9 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.27□□□□□ -2.37
Hdac4Q6NZM9 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.27□□□□□ -2.37
Hdac4Q6NZM9 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.27□□□□□ -2.37
Hdac4Q6NZM9 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.26□□□□□ -2.37
Hdac4Q6NZM9 Gm24246-201ENSMUST00000157315 132 ntBASIC0.26□□□□□ -2.37
Hdac4Q6NZM9 Gm22336-201ENSMUST00000157719 107 ntBASIC0.26□□□□□ -2.37
Hdac4Q6NZM9 Gm22775-201ENSMUST00000177630 120 ntBASIC0.26□□□□□ -2.37
Hdac4Q6NZM9 Gm23569-201ENSMUST00000180120 120 ntBASIC0.26□□□□□ -2.37
Hdac4Q6NZM9 Mir6342-201ENSMUST00000183870 125 ntBASIC0.26□□□□□ -2.37
Hdac4Q6NZM9 Gm25894-201ENSMUST00000083458 75 ntBASIC0.26□□□□□ -2.37
Hdac4Q6NZM9 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.26□□□□□ -2.37
Hdac4Q6NZM9 Gm12469-201ENSMUST00000117623 207 ntBASIC0.25□□□□□ -2.37
Hdac4Q6NZM9 Gm25600-201ENSMUST00000158357 106 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 223.2 ms