Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Gm25992-201ENSMUST00000102437 109 ntBASIC2.18□□□□□ -2.06
Scaf1Q5U4C3 Gm12469-201ENSMUST00000117623 207 ntBASIC2.18□□□□□ -2.06
Scaf1Q5U4C3 Gm24379-201ENSMUST00000122695 86 ntBASIC2.18□□□□□ -2.06
Scaf1Q5U4C3 Gm23714-201ENSMUST00000179259 105 ntBASIC2.18□□□□□ -2.06
Scaf1Q5U4C3 Gm16399-201ENSMUST00000181423 219 ntBASIC2.18□□□□□ -2.06
Scaf1Q5U4C3 Gm44483-201ENSMUST00000197203 97 ntBASIC2.18□□□□□ -2.06
Scaf1Q5U4C3 Gm44469-201ENSMUST00000198558 79 ntBASIC2.18□□□□□ -2.06
Scaf1Q5U4C3 Gm43944-201ENSMUST00000205220 120 ntBASIC2.18□□□□□ -2.06
Scaf1Q5U4C3 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC2.18□□□□□ -2.06
Scaf1Q5U4C3 mt-Tc-201ENSMUST00000082400 66 ntBASIC2.18□□□□□ -2.06
Scaf1Q5U4C3 Gm23344-201ENSMUST00000083818 68 ntBASIC2.18□□□□□ -2.06
Scaf1Q5U4C3 AC127302.3-201ENSMUST00000215480 2791 ntBASIC2.17□□□□□ -2.06
Scaf1Q5U4C3 Gm23130-201ENSMUST00000104252 74 ntBASIC2.17□□□□□ -2.06
Scaf1Q5U4C3 Gm23881-201ENSMUST00000116872 66 ntBASIC2.17□□□□□ -2.06
Scaf1Q5U4C3 Gm16265-201ENSMUST00000134558 108 ntBASIC2.17□□□□□ -2.06
Scaf1Q5U4C3 Gm25901-201ENSMUST00000158494 130 ntBASIC2.17□□□□□ -2.06
Scaf1Q5U4C3 Gm22251-201ENSMUST00000083216 107 ntBASIC2.17□□□□□ -2.06
Scaf1Q5U4C3 Gm25110-201ENSMUST00000116684 121 ntBASIC2.16□□□□□ -2.06
Scaf1Q5U4C3 Gm25775-201ENSMUST00000116716 121 ntBASIC2.16□□□□□ -2.06
Scaf1Q5U4C3 Gm24795-201ENSMUST00000116737 121 ntBASIC2.16□□□□□ -2.06
Scaf1Q5U4C3 Gm25171-201ENSMUST00000116926 121 ntBASIC2.16□□□□□ -2.06
Scaf1Q5U4C3 Gm22862-201ENSMUST00000178593 121 ntBASIC2.16□□□□□ -2.06
Scaf1Q5U4C3 Mir320-201ENSMUST00000083594 82 ntBASIC2.16□□□□□ -2.06
Scaf1Q5U4C3 Gm25022-201ENSMUST00000102205 83 ntBASIC2.15□□□□□ -2.07
Scaf1Q5U4C3 Mir467a-6-201ENSMUST00000177790 83 ntBASIC2.15□□□□□ -2.07
Scaf1Q5U4C3 Mir467a-3-201ENSMUST00000178082 83 ntBASIC2.15□□□□□ -2.07
Scaf1Q5U4C3 Gm23267-201ENSMUST00000178490 132 ntBASIC2.15□□□□□ -2.07
Scaf1Q5U4C3 Mir467a-7-201ENSMUST00000178635 83 ntBASIC2.15□□□□□ -2.07
Scaf1Q5U4C3 Mir467a-10-201ENSMUST00000179320 83 ntBASIC2.15□□□□□ -2.07
Scaf1Q5U4C3 Mir467a-5-201ENSMUST00000179352 83 ntBASIC2.15□□□□□ -2.07
Scaf1Q5U4C3 Mir467a-2-201ENSMUST00000179447 83 ntBASIC2.15□□□□□ -2.07
Scaf1Q5U4C3 Mir467a-9-201ENSMUST00000179752 83 ntBASIC2.15□□□□□ -2.07
Scaf1Q5U4C3 Mir467a-4-201ENSMUST00000179923 83 ntBASIC2.15□□□□□ -2.07
Scaf1Q5U4C3 Mir467a-8-201ENSMUST00000180070 83 ntBASIC2.15□□□□□ -2.07
Scaf1Q5U4C3 Gm44490-201ENSMUST00000198566 127 ntBASIC2.15□□□□□ -2.07
Scaf1Q5U4C3 Gm25128-201ENSMUST00000083339 76 ntBASIC2.15□□□□□ -2.07
Scaf1Q5U4C3 Gm22429-201ENSMUST00000158553 130 ntBASIC2.14□□□□□ -2.07
Scaf1Q5U4C3 Gm26466-201ENSMUST00000179615 79 ntBASIC2.14□□□□□ -2.07
Scaf1Q5U4C3 Gm27993-201ENSMUST00000184362 85 ntBASIC2.14□□□□□ -2.07
Scaf1Q5U4C3 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Scaf1Q5U4C3 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
Scaf1Q5U4C3 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC2.13□□□□□ -2.07
Scaf1Q5U4C3 Gm24902-201ENSMUST00000158126 123 ntBASIC2.12□□□□□ -2.07
Scaf1Q5U4C3 Gm36956-201ENSMUST00000193830 214 ntBASIC2.12□□□□□ -2.07
Scaf1Q5U4C3 Gm25289-201ENSMUST00000122799 119 ntBASIC2.11□□□□□ -2.07
Scaf1Q5U4C3 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC2.11□□□□□ -2.07
Scaf1Q5U4C3 Mir1933-201ENSMUST00000158930 88 ntBASIC2.11□□□□□ -2.07
Scaf1Q5U4C3 Gm23339-201ENSMUST00000158962 139 ntBASIC2.11□□□□□ -2.07
Scaf1Q5U4C3 Gm24527-201ENSMUST00000082920 107 ntBASIC2.11□□□□□ -2.07
Scaf1Q5U4C3 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Scaf1Q5U4C3 Gm26253-201ENSMUST00000122493 103 ntBASIC2.1□□□□□ -2.07
Scaf1Q5U4C3 Gm26133-201ENSMUST00000157363 100 ntBASIC2.1□□□□□ -2.07
Scaf1Q5U4C3 Mir8119-201ENSMUST00000183371 129 ntBASIC2.1□□□□□ -2.07
Scaf1Q5U4C3 Mir6390-201ENSMUST00000184405 129 ntBASIC2.1□□□□□ -2.07
Scaf1Q5U4C3 Mir1a-1-201ENSMUST00000093635 77 ntBASIC2.1□□□□□ -2.07
Scaf1Q5U4C3 Gm13231-201ENSMUST00000119218 2850 ntBASIC2.09□□□□□ -2.07
Scaf1Q5U4C3 Gm22233-201ENSMUST00000157464 114 ntBASIC2.09□□□□□ -2.07
Scaf1Q5U4C3 Gm22386-201ENSMUST00000158192 129 ntBASIC2.09□□□□□ -2.07
Scaf1Q5U4C3 Gm25868-201ENSMUST00000158253 114 ntBASIC2.09□□□□□ -2.07
Scaf1Q5U4C3 Gm25831-201ENSMUST00000158924 163 ntBASIC2.09□□□□□ -2.07
Scaf1Q5U4C3 Gm10548-202ENSMUST00000165672 272 ntBASIC2.09□□□□□ -2.07
Scaf1Q5U4C3 Gm23967-201ENSMUST00000175062 78 ntBASIC2.09□□□□□ -2.07
Scaf1Q5U4C3 Mir30a-201ENSMUST00000083471 71 ntBASIC2.09□□□□□ -2.07
Scaf1Q5U4C3 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
Scaf1Q5U4C3 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Scaf1Q5U4C3 Gm24476-201ENSMUST00000157437 131 ntBASIC2.08□□□□□ -2.08
Scaf1Q5U4C3 Gm23900-201ENSMUST00000157569 108 ntBASIC2.08□□□□□ -2.08
Scaf1Q5U4C3 Gm23065-201ENSMUST00000158236 130 ntBASIC2.08□□□□□ -2.08
Scaf1Q5U4C3 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Scaf1Q5U4C3 Gm37824-201ENSMUST00000193430 3236 ntBASIC2.07□□□□□ -2.08
Scaf1Q5U4C3 Gm43960-201ENSMUST00000204249 5020 ntBASIC2.07□□□□□ -2.08
Scaf1Q5U4C3 Gm22515-201ENSMUST00000158273 305 ntBASIC2.07□□□□□ -2.08
Scaf1Q5U4C3 Gm25014-201ENSMUST00000158401 103 ntBASIC2.07□□□□□ -2.08
Scaf1Q5U4C3 Gm24129-201ENSMUST00000158537 97 ntBASIC2.07□□□□□ -2.08
Scaf1Q5U4C3 AC132833.2-201ENSMUST00000228699 157 ntBASIC2.07□□□□□ -2.08
Scaf1Q5U4C3 Gm22753-201ENSMUST00000083657 107 ntBASIC2.07□□□□□ -2.08
Scaf1Q5U4C3 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Scaf1Q5U4C3 Gm24174-201ENSMUST00000158933 111 ntBASIC2.06□□□□□ -2.08
Scaf1Q5U4C3 Gm27711-201ENSMUST00000183802 118 ntBASIC2.06□□□□□ -2.08
Scaf1Q5U4C3 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Scaf1Q5U4C3 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Scaf1Q5U4C3 Gm27248-201ENSMUST00000184004 166 ntBASIC2.05□□□□□ -2.08
Scaf1Q5U4C3 AC166341.8-201ENSMUST00000221267 108 ntBASIC2.05□□□□□ -2.08
Scaf1Q5U4C3 Gm23301-201ENSMUST00000082713 65 ntBASIC2.05□□□□□ -2.08
Scaf1Q5U4C3 Mir5619-201ENSMUST00000176065 61 ntBASIC2.04□□□□□ -2.08
Scaf1Q5U4C3 Gm24801-201ENSMUST00000178503 105 ntBASIC2.04□□□□□ -2.08
Scaf1Q5U4C3 Gm25851-201ENSMUST00000082794 107 ntBASIC2.04□□□□□ -2.08
Scaf1Q5U4C3 Gm27326-201ENSMUST00000183504 95 ntBASIC2.03□□□□□ -2.08
Scaf1Q5U4C3 Gm27894-201ENSMUST00000184177 92 ntBASIC2.03□□□□□ -2.08
Scaf1Q5U4C3 Gm44488-201ENSMUST00000199467 119 ntBASIC2.03□□□□□ -2.08
Scaf1Q5U4C3 Gm44932-201ENSMUST00000206799 121 ntBASIC2.03□□□□□ -2.08
Scaf1Q5U4C3 mt-Tn-201ENSMUST00000082399 71 ntBASIC2.03□□□□□ -2.08
Scaf1Q5U4C3 Gm11694-201ENSMUST00000118637 159 ntBASIC2.02□□□□□ -2.09
Scaf1Q5U4C3 Gm26158-201ENSMUST00000158973 119 ntBASIC2.02□□□□□ -2.09
Scaf1Q5U4C3 Gm22466-201ENSMUST00000175278 69 ntBASIC2.02□□□□□ -2.09
Scaf1Q5U4C3 Gm22129-201ENSMUST00000179034 107 ntBASIC2.02□□□□□ -2.09
Scaf1Q5U4C3 Gm43911-201ENSMUST00000203097 76 ntBASIC2.02□□□□□ -2.09
Scaf1Q5U4C3 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Scaf1Q5U4C3 n-R5s157-201ENSMUST00000122543 121 ntBASIC2.01□□□□□ -2.09
Scaf1Q5U4C3 Gm38323-201ENSMUST00000192450 210 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 227.6 ms