Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Gm37624-201ENSMUST00000193751 219 ntBASIC0.06□□□□□ -2.4
Trav6-2Q5R1I4 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
Trav6-2Q5R1I4 Gm22303-201ENSMUST00000082686 122 ntBASIC0.06□□□□□ -2.4
Trav6-2Q5R1I4 Gm23423-201ENSMUST00000082782 106 ntBASIC0.06□□□□□ -2.4
Trav6-2Q5R1I4 Gm22048-201ENSMUST00000104721 89 ntBASIC0.05□□□□□ -2.4
Trav6-2Q5R1I4 Mir3089-201ENSMUST00000175350 84 ntBASIC0.05□□□□□ -2.4
Trav6-2Q5R1I4 Mir8107-201ENSMUST00000184024 117 ntBASIC0.05□□□□□ -2.4
Trav6-2Q5R1I4 AC124739.2-201ENSMUST00000222201 109 ntBASIC0.05□□□□□ -2.4
Trav6-2Q5R1I4 Gm23445-201ENSMUST00000082800 107 ntBASIC0.05□□□□□ -2.4
Trav6-2Q5R1I4 Gm25136-201ENSMUST00000083253 115 ntBASIC0.05□□□□□ -2.4
Trav6-2Q5R1I4 Gm25885-201ENSMUST00000157779 109 ntBASIC0.04□□□□□ -2.4
Trav6-2Q5R1I4 Gm24054-201ENSMUST00000158619 105 ntBASIC0.04□□□□□ -2.4
Trav6-2Q5R1I4 Gm23209-201ENSMUST00000158667 110 ntBASIC0.04□□□□□ -2.4
Trav6-2Q5R1I4 mt-Td-201ENSMUST00000082404 70 ntBASIC0.04□□□□□ -2.4
Trav6-2Q5R1I4 Snora75-201ENSMUST00000082903 133 ntBASIC0.04□□□□□ -2.4
Trav6-2Q5R1I4 Gm25315-201ENSMUST00000116823 121 ntBASIC0.03□□□□□ -2.4
Trav6-2Q5R1I4 Gm26290-201ENSMUST00000158891 145 ntBASIC0.03□□□□□ -2.4
Trav6-2Q5R1I4 Gm26097-201ENSMUST00000179642 93 ntBASIC0.03□□□□□ -2.4
Trav6-2Q5R1I4 Gm27694-201ENSMUST00000184740 86 ntBASIC0.03□□□□□ -2.4
Trav6-2Q5R1I4 Mir376b-201ENSMUST00000195930 82 ntBASIC0.03□□□□□ -2.4
Trav6-2Q5R1I4 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
Trav6-2Q5R1I4 Mir216b-201ENSMUST00000102363 86 ntBASIC0.02□□□□□ -2.41
Trav6-2Q5R1I4 Gm11644-201ENSMUST00000119735 150 ntBASIC0.02□□□□□ -2.41
Trav6-2Q5R1I4 Gm25006-201ENSMUST00000083813 107 ntBASIC0.02□□□□□ -2.41
Trav6-2Q5R1I4 Mir1a-1-201ENSMUST00000093635 77 ntBASIC0.02□□□□□ -2.41
Trav6-2Q5R1I4 Gm44345-201ENSMUST00000199560 135 ntBASIC0.01□□□□□ -2.41
Trav6-2Q5R1I4 Gm23509-201ENSMUST00000083080 160 ntBASIC0.01□□□□□ -2.41
Trav6-2Q5R1I4 Gm25703-201ENSMUST00000083123 151 ntBASIC0.01□□□□□ -2.41
Trav6-2Q5R1I4 Gm22105-201ENSMUST00000116734 116 ntBASIC0□□□□□ -2.41
Trav6-2Q5R1I4 Gm24131-201ENSMUST00000158539 107 ntBASIC0□□□□□ -2.41
Trav6-2Q5R1I4 Gm23337-201ENSMUST00000158959 118 ntBASIC0□□□□□ -2.41
Trav6-2Q5R1I4 Gm44602-201ENSMUST00000205948 132 ntBASIC0□□□□□ -2.41
Trav6-2Q5R1I4 Gm25797-201ENSMUST00000082640 107 ntBASIC0□□□□□ -2.41
Trav6-2Q5R1I4 Gm23253-201ENSMUST00000157441 104 ntBASIC-0.01□□□□□ -2.41
Trav6-2Q5R1I4 Gm23036-201ENSMUST00000157885 99 ntBASIC-0.01□□□□□ -2.41
Trav6-2Q5R1I4 Gm24903-201ENSMUST00000158131 126 ntBASIC-0.01□□□□□ -2.41
Trav6-2Q5R1I4 Mir3473d-201ENSMUST00000175346 81 ntBASIC-0.01□□□□□ -2.41
Trav6-2Q5R1I4 Mir466b-1-201ENSMUST00000177988 82 ntBASIC-0.01□□□□□ -2.41
Trav6-2Q5R1I4 Gm26398-201ENSMUST00000179015 127 ntBASIC-0.01□□□□□ -2.41
Trav6-2Q5R1I4 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.01□□□□□ -2.41
Trav6-2Q5R1I4 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC-0.01□□□□□ -2.41
Trav6-2Q5R1I4 Gm22368-201ENSMUST00000102416 109 ntBASIC-0.02□□□□□ -2.41
Trav6-2Q5R1I4 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.02□□□□□ -2.41
Trav6-2Q5R1I4 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.03□□□□□ -2.41
Trav6-2Q5R1I4 Gm23661-201ENSMUST00000122630 87 ntBASIC-0.03□□□□□ -2.41
Trav6-2Q5R1I4 Gm25060-201ENSMUST00000157374 130 ntBASIC-0.03□□□□□ -2.41
Trav6-2Q5R1I4 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.03□□□□□ -2.41
Trav6-2Q5R1I4 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.03□□□□□ -2.41
Trav6-2Q5R1I4 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.03□□□□□ -2.41
Trav6-2Q5R1I4 Gm38208-201ENSMUST00000192476 114 ntBASIC-0.03□□□□□ -2.41
Trav6-2Q5R1I4 Gm22652-201ENSMUST00000083207 131 ntBASIC-0.03□□□□□ -2.41
Trav6-2Q5R1I4 Mir18-201ENSMUST00000083469 96 ntBASIC-0.03□□□□□ -2.41
Trav6-2Q5R1I4 Gm23947-201ENSMUST00000093636 107 ntBASIC-0.03□□□□□ -2.41
Trav6-2Q5R1I4 Gm11694-201ENSMUST00000118637 159 ntBASIC-0.04□□□□□ -2.42
Trav6-2Q5R1I4 Gm22606-201ENSMUST00000158290 103 ntBASIC-0.04□□□□□ -2.42
Trav6-2Q5R1I4 Gm22139-201ENSMUST00000158747 105 ntBASIC-0.04□□□□□ -2.42
Trav6-2Q5R1I4 Gm23020-201ENSMUST00000158766 253 ntBASIC-0.04□□□□□ -2.42
Trav6-2Q5R1I4 Gm23504-201ENSMUST00000158988 95 ntBASIC-0.04□□□□□ -2.42
Trav6-2Q5R1I4 Mir3967-201ENSMUST00000198710 68 ntBASIC-0.04□□□□□ -2.42
Trav6-2Q5R1I4 Gm44327-201ENSMUST00000200068 117 ntBASIC-0.04□□□□□ -2.42
Trav6-2Q5R1I4 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.04□□□□□ -2.42
Trav6-2Q5R1I4 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.04□□□□□ -2.42
Trav6-2Q5R1I4 Gm22981-201ENSMUST00000082611 75 ntBASIC-0.04□□□□□ -2.42
Trav6-2Q5R1I4 Snord95-201ENSMUST00000082846 68 ntBASIC-0.04□□□□□ -2.42
Trav6-2Q5R1I4 n-R5s12-201ENSMUST00000083785 119 ntBASIC-0.04□□□□□ -2.42
Trav6-2Q5R1I4 Gm23749-201ENSMUST00000104223 131 ntBASIC-0.05□□□□□ -2.42
Trav6-2Q5R1I4 Gm22373-201ENSMUST00000104584 89 ntBASIC-0.05□□□□□ -2.42
Trav6-2Q5R1I4 Gm25565-201ENSMUST00000104605 105 ntBASIC-0.05□□□□□ -2.42
Trav6-2Q5R1I4 Gm25716-201ENSMUST00000158628 104 ntBASIC-0.05□□□□□ -2.42
Trav6-2Q5R1I4 Mir1966-201ENSMUST00000158807 108 ntBASIC-0.05□□□□□ -2.42
Trav6-2Q5R1I4 Gm27297-201ENSMUST00000183395 105 ntBASIC-0.05□□□□□ -2.42
Trav6-2Q5R1I4 Gm24461-201ENSMUST00000082735 103 ntBASIC-0.05□□□□□ -2.42
Trav6-2Q5R1I4 Gm24457-201ENSMUST00000083196 105 ntBASIC-0.05□□□□□ -2.42
Trav6-2Q5R1I4 Gm25629-201ENSMUST00000084001 107 ntBASIC-0.05□□□□□ -2.42
Trav6-2Q5R1I4 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
Trav6-2Q5R1I4 Gm24793-201ENSMUST00000104289 132 ntBASIC-0.06□□□□□ -2.42
Trav6-2Q5R1I4 Snord90-201ENSMUST00000104568 111 ntBASIC-0.06□□□□□ -2.42
Trav6-2Q5R1I4 Gm22337-201ENSMUST00000157721 132 ntBASIC-0.06□□□□□ -2.42
Trav6-2Q5R1I4 Gm24009-201ENSMUST00000157734 93 ntBASIC-0.06□□□□□ -2.42
Trav6-2Q5R1I4 Gm22699-201ENSMUST00000175376 105 ntBASIC-0.06□□□□□ -2.42
Trav6-2Q5R1I4 Gm44853-201ENSMUST00000209070 250 ntBASIC-0.06□□□□□ -2.42
Trav6-2Q5R1I4 Gm25899-201ENSMUST00000082672 141 ntBASIC-0.06□□□□□ -2.42
Trav6-2Q5R1I4 Gm25791-201ENSMUST00000083292 137 ntBASIC-0.06□□□□□ -2.42
Trav6-2Q5R1I4 Traj61-201ENSMUST00000165025 72 ntBASIC-0.07□□□□□ -2.42
Trav6-2Q5R1I4 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.07□□□□□ -2.42
Trav6-2Q5R1I4 Gm43927-201ENSMUST00000204599 117 ntBASIC-0.07□□□□□ -2.42
Trav6-2Q5R1I4 Snord85-201ENSMUST00000083262 73 ntBASIC-0.07□□□□□ -2.42
Trav6-2Q5R1I4 Mir466h-201ENSMUST00000104748 81 ntBASIC-0.08□□□□□ -2.42
Trav6-2Q5R1I4 n-R5s39-201ENSMUST00000122613 108 ntBASIC-0.08□□□□□ -2.42
Trav6-2Q5R1I4 Gm26468-201ENSMUST00000158644 106 ntBASIC-0.08□□□□□ -2.42
Trav6-2Q5R1I4 Mir669j-201ENSMUST00000179023 121 ntBASIC-0.08□□□□□ -2.42
Trav6-2Q5R1I4 Gm37545-201ENSMUST00000186512 148 ntBASIC-0.08□□□□□ -2.42
Trav6-2Q5R1I4 Gm42845-201ENSMUST00000197766 105 ntBASIC-0.08□□□□□ -2.42
Trav6-2Q5R1I4 Gm25309-201ENSMUST00000116728 126 ntBASIC-0.09□□□□□ -2.42
Trav6-2Q5R1I4 Gm23990-201ENSMUST00000117031 117 ntBASIC-0.09□□□□□ -2.42
Trav6-2Q5R1I4 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.09□□□□□ -2.42
Trav6-2Q5R1I4 Gm25599-201ENSMUST00000157816 103 ntBASIC-0.09□□□□□ -2.42
Trav6-2Q5R1I4 Gm24884-201ENSMUST00000158784 119 ntBASIC-0.09□□□□□ -2.42
Trav6-2Q5R1I4 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.09□□□□□ -2.42
Trav6-2Q5R1I4 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.09□□□□□ -2.42
Retrieved 100 of 76,532 protein–RNA pairs in 137.4 ms