Protein–RNA interactions for Protein: Q5R1A3

Trdv4, T cell receptor delta variable 4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv4Q5R1A3 Gm25680-201ENSMUST00000116917 126 ntBASIC0.29□□□□□ -2.36
Trdv4Q5R1A3 Gm22635-201ENSMUST00000116962 126 ntBASIC0.29□□□□□ -2.36
Trdv4Q5R1A3 Gm25974-201ENSMUST00000158701 94 ntBASIC0.29□□□□□ -2.36
Trdv4Q5R1A3 Gm25071-201ENSMUST00000175232 70 ntBASIC0.29□□□□□ -2.36
Trdv4Q5R1A3 Gm8034-201ENSMUST00000178853 132 ntBASIC0.29□□□□□ -2.36
Trdv4Q5R1A3 Mir21c-201ENSMUST00000184910 78 ntBASIC0.29□□□□□ -2.36
Trdv4Q5R1A3 Mir7229-201ENSMUST00000197062 53 ntBASIC0.29□□□□□ -2.36
Trdv4Q5R1A3 Gm26202-201ENSMUST00000082910 65 ntBASIC0.29□□□□□ -2.36
Trdv4Q5R1A3 Gm24449-201ENSMUST00000083985 106 ntBASIC0.29□□□□□ -2.36
Trdv4Q5R1A3 Gm22451-201ENSMUST00000122803 151 ntBASIC0.28□□□□□ -2.36
Trdv4Q5R1A3 Gm22966-201ENSMUST00000157957 129 ntBASIC0.28□□□□□ -2.36
Trdv4Q5R1A3 Gm17528-201ENSMUST00000171026 239 ntBASIC0.28□□□□□ -2.36
Trdv4Q5R1A3 Gm22239-201ENSMUST00000175220 103 ntBASIC0.28□□□□□ -2.36
Trdv4Q5R1A3 Gm22775-201ENSMUST00000177630 120 ntBASIC0.28□□□□□ -2.36
Trdv4Q5R1A3 Gm26285-201ENSMUST00000177923 107 ntBASIC0.28□□□□□ -2.36
Trdv4Q5R1A3 Gm23569-201ENSMUST00000180120 120 ntBASIC0.28□□□□□ -2.36
Trdv4Q5R1A3 Gm44457-201ENSMUST00000198109 76 ntBASIC0.28□□□□□ -2.36
Trdv4Q5R1A3 Gm44828-201ENSMUST00000203745 106 ntBASIC0.28□□□□□ -2.36
Trdv4Q5R1A3 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.28□□□□□ -2.36
Trdv4Q5R1A3 Gm23622-201ENSMUST00000082460 107 ntBASIC0.28□□□□□ -2.36
Trdv4Q5R1A3 Mir448-201ENSMUST00000083516 112 ntBASIC0.28□□□□□ -2.36
Trdv4Q5R1A3 Gm11694-201ENSMUST00000118637 159 ntBASIC0.27□□□□□ -2.37
Trdv4Q5R1A3 Gm23661-201ENSMUST00000122630 87 ntBASIC0.27□□□□□ -2.37
Trdv4Q5R1A3 Gm22541-201ENSMUST00000158165 127 ntBASIC0.27□□□□□ -2.37
Trdv4Q5R1A3 Gm26398-201ENSMUST00000179015 127 ntBASIC0.27□□□□□ -2.37
Trdv4Q5R1A3 Gm2077-201ENSMUST00000195017 319 ntBASIC0.27□□□□□ -2.37
Trdv4Q5R1A3 Gm44470-201ENSMUST00000203913 142 ntBASIC0.27□□□□□ -2.37
Trdv4Q5R1A3 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.27□□□□□ -2.37
Trdv4Q5R1A3 Gm23969-201ENSMUST00000083324 74 ntBASIC0.27□□□□□ -2.37
Trdv4Q5R1A3 Gm22681-201ENSMUST00000083853 106 ntBASIC0.27□□□□□ -2.37
Trdv4Q5R1A3 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
Trdv4Q5R1A3 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.26□□□□□ -2.37
Trdv4Q5R1A3 Mir764-201ENSMUST00000103259 108 ntBASIC0.26□□□□□ -2.37
Trdv4Q5R1A3 Gm23482-201ENSMUST00000104172 122 ntBASIC0.26□□□□□ -2.37
Trdv4Q5R1A3 Gm12013-201ENSMUST00000121971 155 ntBASIC0.26□□□□□ -2.37
Trdv4Q5R1A3 Gm26152-201ENSMUST00000157427 101 ntBASIC0.26□□□□□ -2.37
Trdv4Q5R1A3 Gm22983-201ENSMUST00000158308 104 ntBASIC0.26□□□□□ -2.37
Trdv4Q5R1A3 Gm24321-201ENSMUST00000175348 80 ntBASIC0.26□□□□□ -2.37
Trdv4Q5R1A3 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC0.26□□□□□ -2.37
Trdv4Q5R1A3 Mir216b-201ENSMUST00000102363 86 ntBASIC0.25□□□□□ -2.37
Trdv4Q5R1A3 Gm25040-201ENSMUST00000103877 66 ntBASIC0.25□□□□□ -2.37
Trdv4Q5R1A3 Gm24379-201ENSMUST00000122695 86 ntBASIC0.25□□□□□ -2.37
Trdv4Q5R1A3 Gm24913-201ENSMUST00000157286 107 ntBASIC0.25□□□□□ -2.37
Trdv4Q5R1A3 Gm22089-201ENSMUST00000158336 102 ntBASIC0.25□□□□□ -2.37
Trdv4Q5R1A3 Mir6394-201ENSMUST00000184738 99 ntBASIC0.25□□□□□ -2.37
Trdv4Q5R1A3 AC164561.1-201ENSMUST00000220414 115 ntBASIC0.25□□□□□ -2.37
Trdv4Q5R1A3 mt-Ts2-201ENSMUST00000082416 59 ntBASIC0.25□□□□□ -2.37
Trdv4Q5R1A3 Gm24524-201ENSMUST00000082925 170 ntBASIC0.25□□□□□ -2.37
Trdv4Q5R1A3 Mir200a-201ENSMUST00000083466 90 ntBASIC0.25□□□□□ -2.37
Trdv4Q5R1A3 Mir1a-1-201ENSMUST00000093635 77 ntBASIC0.25□□□□□ -2.37
Trdv4Q5R1A3 Gm22003-201ENSMUST00000101885 107 ntBASIC0.24□□□□□ -2.37
Trdv4Q5R1A3 Mir466b-3-201ENSMUST00000103806 81 ntBASIC0.24□□□□□ -2.37
Trdv4Q5R1A3 Gm22772-201ENSMUST00000104451 121 ntBASIC0.24□□□□□ -2.37
Trdv4Q5R1A3 Gm23321-201ENSMUST00000104465 126 ntBASIC0.24□□□□□ -2.37
Trdv4Q5R1A3 Gm23410-201ENSMUST00000179967 107 ntBASIC0.24□□□□□ -2.37
Trdv4Q5R1A3 Gm22756-201ENSMUST00000180118 107 ntBASIC0.24□□□□□ -2.37
Trdv4Q5R1A3 Gm27475-201ENSMUST00000183420 61 ntBASIC0.24□□□□□ -2.37
Trdv4Q5R1A3 Mir7065-201ENSMUST00000185110 61 ntBASIC0.24□□□□□ -2.37
Trdv4Q5R1A3 Snora75-201ENSMUST00000082903 133 ntBASIC0.24□□□□□ -2.37
Trdv4Q5R1A3 Gm22505-201ENSMUST00000082956 108 ntBASIC0.24□□□□□ -2.37
Trdv4Q5R1A3 Gm22363-201ENSMUST00000083100 108 ntBASIC0.24□□□□□ -2.37
Trdv4Q5R1A3 Gm23814-201ENSMUST00000083230 102 ntBASIC0.24□□□□□ -2.37
Trdv4Q5R1A3 Gm23095-201ENSMUST00000083446 107 ntBASIC0.24□□□□□ -2.37
Trdv4Q5R1A3 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.23□□□□□ -2.37
Trdv4Q5R1A3 Gm24233-201ENSMUST00000104317 122 ntBASIC0.23□□□□□ -2.37
Trdv4Q5R1A3 Gm24009-201ENSMUST00000157734 93 ntBASIC0.23□□□□□ -2.37
Trdv4Q5R1A3 Gm22708-201ENSMUST00000158987 103 ntBASIC0.23□□□□□ -2.37
Trdv4Q5R1A3 Gm26337-201ENSMUST00000178000 79 ntBASIC0.23□□□□□ -2.37
Trdv4Q5R1A3 Gm23922-201ENSMUST00000178792 79 ntBASIC0.23□□□□□ -2.37
Trdv4Q5R1A3 Gm24657-201ENSMUST00000180085 79 ntBASIC0.23□□□□□ -2.37
Trdv4Q5R1A3 Gm22996-201ENSMUST00000180236 79 ntBASIC0.23□□□□□ -2.37
Trdv4Q5R1A3 Gm44458-201ENSMUST00000196594 143 ntBASIC0.23□□□□□ -2.37
Trdv4Q5R1A3 Gm13065-201ENSMUST00000119178 141 ntBASIC0.22□□□□□ -2.37
Trdv4Q5R1A3 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC0.22□□□□□ -2.37
Trdv4Q5R1A3 Mir3105-201ENSMUST00000175480 85 ntBASIC0.22□□□□□ -2.37
Trdv4Q5R1A3 Mir376b-201ENSMUST00000195930 82 ntBASIC0.22□□□□□ -2.37
Trdv4Q5R1A3 AC126939.1-201ENSMUST00000224943 226 ntBASIC0.22□□□□□ -2.37
Trdv4Q5R1A3 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC0.22□□□□□ -2.37
Trdv4Q5R1A3 Mir670-201ENSMUST00000102380 100 ntBASIC0.21□□□□□ -2.38
Trdv4Q5R1A3 Gm23351-201ENSMUST00000158427 125 ntBASIC0.21□□□□□ -2.38
Trdv4Q5R1A3 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.21□□□□□ -2.38
Trdv4Q5R1A3 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.21□□□□□ -2.38
Trdv4Q5R1A3 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
Trdv4Q5R1A3 Snord64-201ENSMUST00000104003 67 ntBASIC0.2□□□□□ -2.38
Trdv4Q5R1A3 Gm24278-201ENSMUST00000104239 127 ntBASIC0.2□□□□□ -2.38
Trdv4Q5R1A3 Gm24649-201ENSMUST00000157106 134 ntBASIC0.2□□□□□ -2.38
Trdv4Q5R1A3 Gm24842-201ENSMUST00000158681 54 ntBASIC0.2□□□□□ -2.38
Trdv4Q5R1A3 Gm26291-201ENSMUST00000158889 137 ntBASIC0.2□□□□□ -2.38
Trdv4Q5R1A3 Gm26116-201ENSMUST00000175600 77 ntBASIC0.2□□□□□ -2.38
Trdv4Q5R1A3 Gm27297-201ENSMUST00000183395 105 ntBASIC0.2□□□□□ -2.38
Trdv4Q5R1A3 Gm38295-201ENSMUST00000191951 151 ntBASIC0.2□□□□□ -2.38
Trdv4Q5R1A3 Gm44859-201ENSMUST00000207831 94 ntBASIC0.2□□□□□ -2.38
Trdv4Q5R1A3 AC124687.1-201ENSMUST00000221868 189 ntBASIC0.2□□□□□ -2.38
Trdv4Q5R1A3 AC165138.1-201ENSMUST00000226984 270 ntBASIC0.2□□□□□ -2.38
Trdv4Q5R1A3 Gm25408-201ENSMUST00000104104 133 ntBASIC0.19□□□□□ -2.38
Trdv4Q5R1A3 Gm25623-201ENSMUST00000157216 108 ntBASIC0.19□□□□□ -2.38
Trdv4Q5R1A3 Gm23821-201ENSMUST00000158738 106 ntBASIC0.19□□□□□ -2.38
Trdv4Q5R1A3 Mir6985-201ENSMUST00000184641 61 ntBASIC0.19□□□□□ -2.38
Trdv4Q5R1A3 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC0.19□□□□□ -2.38
Trdv4Q5R1A3 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 135.8 ms