Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm23347-201ENSMUST00000083823 82 ntBASIC0.51□□□□□ -2.33
Trim58Q5NCC9 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
Trim58Q5NCC9 Gm23126-201ENSMUST00000104260 134 ntBASIC0.5□□□□□ -2.33
Trim58Q5NCC9 Gm25378-201ENSMUST00000104333 129 ntBASIC0.5□□□□□ -2.33
Trim58Q5NCC9 Gm25680-201ENSMUST00000116917 126 ntBASIC0.5□□□□□ -2.33
Trim58Q5NCC9 Gm22635-201ENSMUST00000116962 126 ntBASIC0.5□□□□□ -2.33
Trim58Q5NCC9 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.5□□□□□ -2.33
Trim58Q5NCC9 Traj61-201ENSMUST00000165025 72 ntBASIC0.5□□□□□ -2.33
Trim58Q5NCC9 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.5□□□□□ -2.33
Trim58Q5NCC9 Gm27993-201ENSMUST00000184362 85 ntBASIC0.5□□□□□ -2.33
Trim58Q5NCC9 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.5□□□□□ -2.33
Trim58Q5NCC9 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.5□□□□□ -2.33
Trim58Q5NCC9 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.5□□□□□ -2.33
Trim58Q5NCC9 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.5□□□□□ -2.33
Trim58Q5NCC9 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.5□□□□□ -2.33
Trim58Q5NCC9 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.5□□□□□ -2.33
Trim58Q5NCC9 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.5□□□□□ -2.33
Trim58Q5NCC9 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.5□□□□□ -2.33
Trim58Q5NCC9 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.5□□□□□ -2.33
Trim58Q5NCC9 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.5□□□□□ -2.33
Trim58Q5NCC9 Gm44469-201ENSMUST00000198558 79 ntBASIC0.5□□□□□ -2.33
Trim58Q5NCC9 Gm44602-201ENSMUST00000205948 132 ntBASIC0.5□□□□□ -2.33
Trim58Q5NCC9 Gm44859-201ENSMUST00000207831 94 ntBASIC0.5□□□□□ -2.33
Trim58Q5NCC9 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC0.5□□□□□ -2.33
Trim58Q5NCC9 Gm25787-201ENSMUST00000104709 92 ntBASIC0.49□□□□□ -2.33
Trim58Q5NCC9 Gm14884-201ENSMUST00000120456 196 ntBASIC0.49□□□□□ -2.33
Trim58Q5NCC9 Gm22520-201ENSMUST00000158269 129 ntBASIC0.49□□□□□ -2.33
Trim58Q5NCC9 Mir6342-201ENSMUST00000183870 125 ntBASIC0.49□□□□□ -2.33
Trim58Q5NCC9 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC0.49□□□□□ -2.33
Trim58Q5NCC9 Gm43944-201ENSMUST00000205220 120 ntBASIC0.49□□□□□ -2.33
Trim58Q5NCC9 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.49□□□□□ -2.33
Trim58Q5NCC9 Gm26303-201ENSMUST00000116845 119 ntBASIC0.48□□□□□ -2.33
Trim58Q5NCC9 Gm13577-201ENSMUST00000121365 205 ntBASIC0.48□□□□□ -2.33
Trim58Q5NCC9 Gm22451-201ENSMUST00000122803 151 ntBASIC0.48□□□□□ -2.33
Trim58Q5NCC9 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC0.48□□□□□ -2.33
Trim58Q5NCC9 Gm26398-201ENSMUST00000179015 127 ntBASIC0.48□□□□□ -2.33
Trim58Q5NCC9 Mir7079-201ENSMUST00000184697 69 ntBASIC0.48□□□□□ -2.33
Trim58Q5NCC9 Gm37330-201ENSMUST00000192606 153 ntBASIC0.48□□□□□ -2.33
Trim58Q5NCC9 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.48□□□□□ -2.33
Trim58Q5NCC9 Gm22772-201ENSMUST00000104451 121 ntBASIC0.47□□□□□ -2.33
Trim58Q5NCC9 Gm23651-201ENSMUST00000116755 120 ntBASIC0.47□□□□□ -2.33
Trim58Q5NCC9 Gm25600-201ENSMUST00000158357 106 ntBASIC0.47□□□□□ -2.33
Trim58Q5NCC9 Gm26291-201ENSMUST00000158889 137 ntBASIC0.47□□□□□ -2.33
Trim58Q5NCC9 Mir21c-201ENSMUST00000184910 78 ntBASIC0.47□□□□□ -2.33
Trim58Q5NCC9 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC0.47□□□□□ -2.33
Trim58Q5NCC9 Gm23239-201ENSMUST00000083006 181 ntBASIC0.47□□□□□ -2.33
Trim58Q5NCC9 Mir1a-1-201ENSMUST00000093635 77 ntBASIC0.47□□□□□ -2.33
Trim58Q5NCC9 Gm22030-201ENSMUST00000116942 63 ntBASIC0.46□□□□□ -2.34
Trim58Q5NCC9 Gm26484-201ENSMUST00000158018 106 ntBASIC0.46□□□□□ -2.34
Trim58Q5NCC9 Gm24129-201ENSMUST00000158537 97 ntBASIC0.46□□□□□ -2.34
Trim58Q5NCC9 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
Trim58Q5NCC9 Gm25894-201ENSMUST00000083458 75 ntBASIC0.46□□□□□ -2.34
Trim58Q5NCC9 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
Trim58Q5NCC9 Snord64-201ENSMUST00000104003 67 ntBASIC0.45□□□□□ -2.34
Trim58Q5NCC9 Gm23321-201ENSMUST00000104465 126 ntBASIC0.45□□□□□ -2.34
Trim58Q5NCC9 Gm12013-201ENSMUST00000121971 155 ntBASIC0.45□□□□□ -2.34
Trim58Q5NCC9 Gm24913-201ENSMUST00000157286 107 ntBASIC0.45□□□□□ -2.34
Trim58Q5NCC9 Gm24290-201ENSMUST00000157634 96 ntBASIC0.45□□□□□ -2.34
Trim58Q5NCC9 Gm22089-201ENSMUST00000158336 102 ntBASIC0.45□□□□□ -2.34
Trim58Q5NCC9 Gm24842-201ENSMUST00000158681 54 ntBASIC0.45□□□□□ -2.34
Trim58Q5NCC9 Gm25693-201ENSMUST00000175443 85 ntBASIC0.45□□□□□ -2.34
Trim58Q5NCC9 Gm20734-201ENSMUST00000216939 193 ntBASIC0.45□□□□□ -2.34
Trim58Q5NCC9 Gm23140-201ENSMUST00000082487 107 ntBASIC0.45□□□□□ -2.34
Trim58Q5NCC9 Gm22297-201ENSMUST00000083312 106 ntBASIC0.45□□□□□ -2.34
Trim58Q5NCC9 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
Trim58Q5NCC9 Gm23482-201ENSMUST00000104172 122 ntBASIC0.44□□□□□ -2.34
Trim58Q5NCC9 Gm11694-201ENSMUST00000118637 159 ntBASIC0.44□□□□□ -2.34
Trim58Q5NCC9 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.44□□□□□ -2.34
Trim58Q5NCC9 Gm22842-201ENSMUST00000157709 118 ntBASIC0.44□□□□□ -2.34
Trim58Q5NCC9 Gm26285-201ENSMUST00000177923 107 ntBASIC0.44□□□□□ -2.34
Trim58Q5NCC9 Gm22286-201ENSMUST00000179708 107 ntBASIC0.44□□□□□ -2.34
Trim58Q5NCC9 Mir7010-201ENSMUST00000183464 63 ntBASIC0.44□□□□□ -2.34
Trim58Q5NCC9 Gm44828-201ENSMUST00000203745 106 ntBASIC0.44□□□□□ -2.34
Trim58Q5NCC9 mt-Ts2-201ENSMUST00000082416 59 ntBASIC0.44□□□□□ -2.34
Trim58Q5NCC9 Gm23622-201ENSMUST00000082460 107 ntBASIC0.44□□□□□ -2.34
Trim58Q5NCC9 Gm26202-201ENSMUST00000082910 65 ntBASIC0.44□□□□□ -2.34
Trim58Q5NCC9 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
Trim58Q5NCC9 Gm23661-201ENSMUST00000122630 87 ntBASIC0.43□□□□□ -2.34
Trim58Q5NCC9 Gm25623-201ENSMUST00000157216 108 ntBASIC0.43□□□□□ -2.34
Trim58Q5NCC9 Gm25974-201ENSMUST00000158701 94 ntBASIC0.43□□□□□ -2.34
Trim58Q5NCC9 Gm22708-201ENSMUST00000158987 103 ntBASIC0.43□□□□□ -2.34
Trim58Q5NCC9 Gm23301-201ENSMUST00000082713 65 ntBASIC0.43□□□□□ -2.34
Trim58Q5NCC9 Gm24524-201ENSMUST00000082925 170 ntBASIC0.43□□□□□ -2.34
Trim58Q5NCC9 Gm10351-201ENSMUST00000087694 125 ntBASIC0.43□□□□□ -2.34
Trim58Q5NCC9 Mir764-201ENSMUST00000103259 108 ntBASIC0.42□□□□□ -2.34
Trim58Q5NCC9 Gm23783-201ENSMUST00000157941 102 ntBASIC0.42□□□□□ -2.34
Trim58Q5NCC9 Gm29535-201ENSMUST00000185723 109 ntBASIC0.42□□□□□ -2.34
Trim58Q5NCC9 Gm28143-201ENSMUST00000191082 109 ntBASIC0.42□□□□□ -2.34
Trim58Q5NCC9 Gm23969-201ENSMUST00000083324 74 ntBASIC0.42□□□□□ -2.34
Trim58Q5NCC9 Mir216b-201ENSMUST00000102363 86 ntBASIC0.41□□□□□ -2.34
Trim58Q5NCC9 Gm25915-201ENSMUST00000104265 126 ntBASIC0.41□□□□□ -2.34
Trim58Q5NCC9 Gm22706-201ENSMUST00000157907 112 ntBASIC0.41□□□□□ -2.34
Trim58Q5NCC9 Mir6389-201ENSMUST00000183661 102 ntBASIC0.41□□□□□ -2.34
Trim58Q5NCC9 Gm38298-201ENSMUST00000193578 118 ntBASIC0.41□□□□□ -2.34
Trim58Q5NCC9 Mir1949-202ENSMUST00000199259 70 ntBASIC0.41□□□□□ -2.34
Trim58Q5NCC9 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.41□□□□□ -2.34
Trim58Q5NCC9 Gm23578-201ENSMUST00000103943 104 ntBASIC0.4□□□□□ -2.35
Trim58Q5NCC9 Gm24555-201ENSMUST00000104548 124 ntBASIC0.4□□□□□ -2.35
Trim58Q5NCC9 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.4□□□□□ -2.35
Trim58Q5NCC9 Gm23351-201ENSMUST00000158427 125 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 157.5 ms