Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm25091-201ENSMUST00000103997 71 ntBASIC0.28□□□□□ -2.36
Trim40Q3UWA4 n-R5s39-201ENSMUST00000122613 108 ntBASIC0.28□□□□□ -2.36
Trim40Q3UWA4 Gm22966-201ENSMUST00000157957 129 ntBASIC0.28□□□□□ -2.36
Trim40Q3UWA4 Mir21c-201ENSMUST00000184910 78 ntBASIC0.28□□□□□ -2.36
Trim40Q3UWA4 Gm23722-201ENSMUST00000083002 130 ntBASIC0.28□□□□□ -2.36
Trim40Q3UWA4 Gm25629-201ENSMUST00000084001 107 ntBASIC0.28□□□□□ -2.36
Trim40Q3UWA4 Gm24278-201ENSMUST00000104239 127 ntBASIC0.27□□□□□ -2.37
Trim40Q3UWA4 Gm12013-201ENSMUST00000121971 155 ntBASIC0.27□□□□□ -2.37
Trim40Q3UWA4 Mir3105-201ENSMUST00000175480 85 ntBASIC0.27□□□□□ -2.37
Trim40Q3UWA4 Gm27475-201ENSMUST00000183420 61 ntBASIC0.27□□□□□ -2.37
Trim40Q3UWA4 Mir7065-201ENSMUST00000185110 61 ntBASIC0.27□□□□□ -2.37
Trim40Q3UWA4 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.27□□□□□ -2.37
Trim40Q3UWA4 Gm24233-201ENSMUST00000104317 122 ntBASIC0.26□□□□□ -2.37
Trim40Q3UWA4 Gm11694-201ENSMUST00000118637 159 ntBASIC0.26□□□□□ -2.37
Trim40Q3UWA4 Gm22911-201ENSMUST00000177920 107 ntBASIC0.26□□□□□ -2.37
Trim40Q3UWA4 Gm7258-201ENSMUST00000179317 300 ntBASIC0.26□□□□□ -2.37
Trim40Q3UWA4 Gm44828-201ENSMUST00000203745 106 ntBASIC0.26□□□□□ -2.37
Trim40Q3UWA4 AC126939.1-201ENSMUST00000224943 226 ntBASIC0.26□□□□□ -2.37
Trim40Q3UWA4 Gm23969-201ENSMUST00000083324 74 ntBASIC0.26□□□□□ -2.37
Trim40Q3UWA4 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.25□□□□□ -2.37
Trim40Q3UWA4 Mir670-201ENSMUST00000102380 100 ntBASIC0.25□□□□□ -2.37
Trim40Q3UWA4 Snord71-201ENSMUST00000104361 85 ntBASIC0.25□□□□□ -2.37
Trim40Q3UWA4 Gm23661-201ENSMUST00000122630 87 ntBASIC0.25□□□□□ -2.37
Trim40Q3UWA4 Gm22349-201ENSMUST00000157864 107 ntBASIC0.25□□□□□ -2.37
Trim40Q3UWA4 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC0.25□□□□□ -2.37
Trim40Q3UWA4 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.25□□□□□ -2.37
Trim40Q3UWA4 AC165138.1-201ENSMUST00000226984 270 ntBASIC0.25□□□□□ -2.37
Trim40Q3UWA4 mt-Ts2-201ENSMUST00000082416 59 ntBASIC0.25□□□□□ -2.37
Trim40Q3UWA4 Gm22681-201ENSMUST00000083853 106 ntBASIC0.25□□□□□ -2.37
Trim40Q3UWA4 Gm25680-201ENSMUST00000116917 126 ntBASIC0.24□□□□□ -2.37
Trim40Q3UWA4 Gm22635-201ENSMUST00000116962 126 ntBASIC0.24□□□□□ -2.37
Trim40Q3UWA4 Gm16186-201ENSMUST00000120132 216 ntBASIC0.24□□□□□ -2.37
Trim40Q3UWA4 Gm24913-201ENSMUST00000157286 107 ntBASIC0.24□□□□□ -2.37
Trim40Q3UWA4 Gm22775-201ENSMUST00000177630 120 ntBASIC0.24□□□□□ -2.37
Trim40Q3UWA4 Gm23569-201ENSMUST00000180120 120 ntBASIC0.24□□□□□ -2.37
Trim40Q3UWA4 Gm27717-201ENSMUST00000183933 151 ntBASIC0.24□□□□□ -2.37
Trim40Q3UWA4 Mir764-201ENSMUST00000103259 108 ntBASIC0.23□□□□□ -2.37
Trim40Q3UWA4 Gm24683-201ENSMUST00000104840 88 ntBASIC0.23□□□□□ -2.37
Trim40Q3UWA4 Gm26285-201ENSMUST00000177923 107 ntBASIC0.23□□□□□ -2.37
Trim40Q3UWA4 Gm27297-201ENSMUST00000183395 105 ntBASIC0.23□□□□□ -2.37
Trim40Q3UWA4 Gm44470-201ENSMUST00000203913 142 ntBASIC0.23□□□□□ -2.37
Trim40Q3UWA4 Gm23622-201ENSMUST00000082460 107 ntBASIC0.23□□□□□ -2.37
Trim40Q3UWA4 Gm26168-201ENSMUST00000083787 112 ntBASIC0.23□□□□□ -2.37
Trim40Q3UWA4 Gm24449-201ENSMUST00000083985 106 ntBASIC0.23□□□□□ -2.37
Trim40Q3UWA4 Mir216b-201ENSMUST00000102363 86 ntBASIC0.22□□□□□ -2.37
Trim40Q3UWA4 Mir466b-3-201ENSMUST00000103806 81 ntBASIC0.22□□□□□ -2.37
Trim40Q3UWA4 Gm23991-201ENSMUST00000117033 93 ntBASIC0.22□□□□□ -2.37
Trim40Q3UWA4 Gm24009-201ENSMUST00000157734 93 ntBASIC0.22□□□□□ -2.37
Trim40Q3UWA4 Gm8034-201ENSMUST00000178853 132 ntBASIC0.22□□□□□ -2.37
Trim40Q3UWA4 AC124687.1-201ENSMUST00000221868 189 ntBASIC0.22□□□□□ -2.37
Trim40Q3UWA4 Gm22303-201ENSMUST00000082686 122 ntBASIC0.22□□□□□ -2.37
Trim40Q3UWA4 Gm22652-201ENSMUST00000083207 131 ntBASIC0.22□□□□□ -2.37
Trim40Q3UWA4 Gm23482-201ENSMUST00000104172 122 ntBASIC0.21□□□□□ -2.38
Trim40Q3UWA4 Scarna8-201ENSMUST00000158333 131 ntBASIC0.21□□□□□ -2.38
Trim40Q3UWA4 Gm22708-201ENSMUST00000158987 103 ntBASIC0.21□□□□□ -2.38
Trim40Q3UWA4 Gm25408-201ENSMUST00000104104 133 ntBASIC0.2□□□□□ -2.38
Trim40Q3UWA4 Gm25056-201ENSMUST00000157372 62 ntBASIC0.2□□□□□ -2.38
Trim40Q3UWA4 Gm26412-201ENSMUST00000157666 55 ntBASIC0.2□□□□□ -2.38
Trim40Q3UWA4 Gm22565-201ENSMUST00000175540 69 ntBASIC0.2□□□□□ -2.38
Trim40Q3UWA4 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
Trim40Q3UWA4 Gm24524-201ENSMUST00000082925 170 ntBASIC0.2□□□□□ -2.38
Trim40Q3UWA4 Gm24649-201ENSMUST00000157106 134 ntBASIC0.19□□□□□ -2.38
Trim40Q3UWA4 Gm25623-201ENSMUST00000157216 108 ntBASIC0.19□□□□□ -2.38
Trim40Q3UWA4 Gm25976-201ENSMUST00000158695 130 ntBASIC0.19□□□□□ -2.38
Trim40Q3UWA4 Mir6365-201ENSMUST00000183990 101 ntBASIC0.19□□□□□ -2.38
Trim40Q3UWA4 Gm25899-201ENSMUST00000082672 141 ntBASIC0.19□□□□□ -2.38
Trim40Q3UWA4 Mir802-201ENSMUST00000103258 97 ntBASIC0.18□□□□□ -2.38
Trim40Q3UWA4 Gm24833-201ENSMUST00000116775 120 ntBASIC0.18□□□□□ -2.38
Trim40Q3UWA4 Gm23239-201ENSMUST00000083006 181 ntBASIC0.18□□□□□ -2.38
Trim40Q3UWA4 Gm23708-201ENSMUST00000104367 123 ntBASIC0.17□□□□□ -2.38
Trim40Q3UWA4 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC0.17□□□□□ -2.38
Trim40Q3UWA4 Gm13577-201ENSMUST00000121365 205 ntBASIC0.17□□□□□ -2.38
Trim40Q3UWA4 Gm22788-201ENSMUST00000157876 61 ntBASIC0.17□□□□□ -2.38
Trim40Q3UWA4 Mir3108-201ENSMUST00000175500 79 ntBASIC0.17□□□□□ -2.38
Trim40Q3UWA4 Gm26337-201ENSMUST00000178000 79 ntBASIC0.17□□□□□ -2.38
Trim40Q3UWA4 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC0.17□□□□□ -2.38
Trim40Q3UWA4 Gm43927-201ENSMUST00000204599 117 ntBASIC0.17□□□□□ -2.38
Trim40Q3UWA4 Gm24073-201ENSMUST00000158177 106 ntBASIC0.16□□□□□ -2.38
Trim40Q3UWA4 Gm24842-201ENSMUST00000158681 54 ntBASIC0.16□□□□□ -2.38
Trim40Q3UWA4 Mir1a-1-201ENSMUST00000093635 77 ntBASIC0.16□□□□□ -2.38
Trim40Q3UWA4 Gm22089-201ENSMUST00000158336 102 ntBASIC0.15□□□□□ -2.39
Trim40Q3UWA4 Gm23351-201ENSMUST00000158427 125 ntBASIC0.15□□□□□ -2.39
Trim40Q3UWA4 Gm26291-201ENSMUST00000158889 137 ntBASIC0.15□□□□□ -2.39
Trim40Q3UWA4 Gm17528-201ENSMUST00000171026 239 ntBASIC0.15□□□□□ -2.39
Trim40Q3UWA4 Gm27851-201ENSMUST00000183529 63 ntBASIC0.15□□□□□ -2.39
Trim40Q3UWA4 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
Trim40Q3UWA4 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.15□□□□□ -2.39
Trim40Q3UWA4 Mir10b-201ENSMUST00000083566 68 ntBASIC0.15□□□□□ -2.39
Trim40Q3UWA4 Gm22772-201ENSMUST00000104451 121 ntBASIC0.14□□□□□ -2.39
Trim40Q3UWA4 Gm23821-201ENSMUST00000158738 106 ntBASIC0.14□□□□□ -2.39
Trim40Q3UWA4 Gm23008-201ENSMUST00000158946 80 ntBASIC0.14□□□□□ -2.39
Trim40Q3UWA4 Gm25071-201ENSMUST00000175232 70 ntBASIC0.14□□□□□ -2.39
Trim40Q3UWA4 Mir3473d-201ENSMUST00000175346 81 ntBASIC0.14□□□□□ -2.39
Trim40Q3UWA4 Gm23922-201ENSMUST00000178792 79 ntBASIC0.14□□□□□ -2.39
Trim40Q3UWA4 Gm24657-201ENSMUST00000180085 79 ntBASIC0.14□□□□□ -2.39
Trim40Q3UWA4 Gm22996-201ENSMUST00000180236 79 ntBASIC0.14□□□□□ -2.39
Trim40Q3UWA4 Gm28001-201ENSMUST00000183561 117 ntBASIC0.14□□□□□ -2.39
Trim40Q3UWA4 Gm44327-201ENSMUST00000200068 117 ntBASIC0.14□□□□□ -2.39
Trim40Q3UWA4 Gm24208-201ENSMUST00000082783 135 ntBASIC0.14□□□□□ -2.39
Trim40Q3UWA4 Gm23651-201ENSMUST00000116755 120 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 76,532 protein–RNA pairs in 139.5 ms